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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0858700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:36243208:36245053:-1 gene:Os03g0858700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1499 family protein. (Os03t0858700-01)
Sequence

ATGGCGCCGCCGCCGCCGTGTTGTGTGCTAGTGGTACGCTGCTGTTCCGGATCCCTCCCT
TCGCCGCCGCCGCCGCCGCCGCCCAGACCCTCTCCCTCCAACAACCTCAGAATCGCCAGA
AGAGAGTTTGTGCTGAGGAGCAGTGAGCTCGCCACGCTCGCTGCCATCTTCCACTTGAGC
GGCACGAAGCCAAGGTACCTGGGCGTGCAGAAGAGTCCTCCATCGCTGGCTCTGTGCCCT
GCCACCAACAATTGCGTTTCCACTTGTGAGGACATCACTGACTCCATTCACTACGCTCCC
CCATGGAACTATAACCCCAAGGACGGACGCAGGGCTAAACCCATCACCAAACATGAAGCC
ATCAACCAGCTCATTCAAGTCGTCACACAAACAAAGCCTGACAACTTCACTCCTCGCCTA
GTAGAGAAAACAGATGACTATGTTCGAGTTGAATACGAGAGTCCTATATTCGGGTTTGTA
GATGATGTGGAGTTCTGGTTCCCTCCTGGTAACAAATCCATTGTTCAGTACCGATCAGCA
TCTCGATCAGGATTCATTGACTTCAACGCCAACAAGAAAAGAGTCAAGGCGCTCAGGTTG
GCACTGGAAAACAAAGGCTGGGCTTCAGAAAGCACCATCTGA

Peptide Sequence

PEP ID

Os03t0858700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:36243208:36245053:-1 gene:Os03g0858700 transcript:Os03t0858700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1499 family protein. (Os03t0858700-01)
Sequence

MAPPPPCCVLVVRCCSGSLPSPPPPPPPRPSPSNNLRIARREFVLRSSELATLAAIFHLS
GTKPRYLGVQKSPPSLALCPATNNCVSTCEDITDSIHYAPPWNYNPKDGRRAKPITKHEA
INQLIQVVTQTKPDNFTPRLVEKTDDYVRVEYESPIFGFVDDVEFWFPPGNKSIVQYRSA
SRSGFIDFNANKKRVKALRLALENKGWASESTI

Transcript Sequence

Transcript ID

Os03t0858700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:36243208:36245053:-1 gene:Os03g0858700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1499 family protein. (Os03t0858700-01)
Sequence

ATCTTCTCTATCTACACTTGTACACAACACTAGCAAACCGCCATGGCGCCGCCGCCGCCG
TGTTGTGTGCTAGTGGTACGCTGCTGTTCCGGATCCCTCCCTTCGCCGCCGCCGCCGCCG
CCGCCCAGACCCTCTCCCTCCAACAACCTCAGAATCGCCAGAAGAGAGTTTGTGCTGAGG
AGCAGTGAGCTCGCCACGCTCGCTGCCATCTTCCACTTGAGCGGCACGAAGCCAAGGTAC
CTGGGCGTGCAGAAGAGTCCTCCATCGCTGGCTCTGTGCCCTGCCACCAACAATTGCGTT
TCCACTTGTGAGGACATCACTGACTCCATTCACTACGCTCCCCCATGGAACTATAACCCC
AAGGACGGACGCAGGGCTAAACCCATCACCAAACATGAAGCCATCAACCAGCTCATTCAA
GTCGTCACACAAACAAAGCCTGACAACTTCACTCCTCGCCTAGTAGAGAAAACAGATGAC
TATGTTCGAGTTGAATACGAGAGTCCTATATTCGGGTTTGTAGATGATGTGGAGTTCTGG
TTCCCTCCTGGTAACAAATCCATTGTTCAGTACCGATCAGCATCTCGATCAGGATTCATT
GACTTCAACGCCAACAAGAAAAGAGTCAAGGCGCTCAGGTTGGCACTGGAAAACAAAGGC
TGGGCTTCAGAAAGCACCATCTGAACCTAACCTCAAGGAAGCCAACCCCTCGAGTCTGTA
CTGGAGTGTGGATTCTAATCCCTCGAGGGATATCCCCTCGTATATCTTTTTCTTCCAAAT
TCGATGCAAATAGTTGTGAAAAATTCTAAAAAAAATTGATAATGTAGAGTATAATGATAC
CTACTAGTCCACCAAAATTCATGTTCAAATTCGATCTACACATCGAGAAACAAAAAAGAC
AAATTTAGATATAAACAGTACGCTATTATTCATACGCTGAATTTGTCTTTTTTATATCTC
GACTTGTGAGTTGAGTTTGAACTTAAGATTTTGTGGAGTTGTATATATGTGTTGTATGAA
TGTTGTCAAATTTTTCCAGAATTTTTCATAACCGTTTAGATGGTTTTTGA