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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0858200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:36224273:36225086:-1 gene:Os03g0858200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0858200-01)
Sequence

ATGTCGTCGTGGATGCAGCACAGGCGGCGGTCGTGGACGGCGCGGTTGCTGTCCTCCGCG
TCGCTCCCGCCGGTGCGCCTGCTCGTCTTCTTCGCCATCGTCATCTTCTTCCTCTCCGTC
TCCTCCTACGTCGACTACAAGGCCATCGAGCGCCGTGCGGAGATCGGCCTCCGCGTCTTC
GCCGCCCCGCTCGCCGCCGTCACCATCTTCCTCCTCTTTCTCGTCCTCCAGCATCGACGC
CGCTACTGGACGCTGCGCCGCCAAGTACACCACCACCATGCATATGCTGATCAGGCCGAG
GCTGCAGGGAGCGGGTCGCCGTGGGTTGTGGCGCTGCTGCTGCTGCTGTTGCTGCTCATG
CTCTCCTTCCAATCCTCTGTCCATTCCATCTGGTTCAGGCCTCTCTGGGATTCTGCTGAT
TACTAG

Peptide Sequence

PEP ID

Os03t0858200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:36224273:36225086:-1 gene:Os03g0858200 transcript:Os03t0858200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0858200-01)
Sequence

MSSWMQHRRRSWTARLLSSASLPPVRLLVFFAIVIFFLSVSSYVDYKAIERRAEIGLRVF
AAPLAAVTIFLLFLVLQHRRRYWTLRRQVHHHHAYADQAEAAGSGSPWVVALLLLLLLLM
LSFQSSVHSIWFRPLWDSADY

Transcript Sequence

Transcript ID

Os03t0858200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:36224273:36225086:-1 gene:Os03g0858200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0858200-01)
Sequence

CTCCACCGCATATCCATCCCCCACCAGTTGTAGCAGTAGCTAGCTCCAAGAGCTTCTTGT
CCATGAATTGTTGATCTCGATCGATCGATCTCTGCTGCCTGCTAGCTAATGAATAAACAA
TAGCTAGGCTATATATATATATATATATATATATATATATATATATATATCGATCGACCA
TGTCGTCGTGGATGCAGCACAGGCGGCGGTCGTGGACGGCGCGGTTGCTGTCCTCCGCGT
CGCTCCCGCCGGTGCGCCTGCTCGTCTTCTTCGCCATCGTCATCTTCTTCCTCTCCGTCT
CCTCCTACGTCGACTACAAGGCCATCGAGCGCCGTGCGGAGATCGGCCTCCGCGTCTTCG
CCGCCCCGCTCGCCGCCGTCACCATCTTCCTCCTCTTTCTCGTCCTCCAGCATCGACGCC
GCTACTGGACGCTGCGCCGCCAAGTACACCACCACCATGCATATGCTGATCAGGCCGAGG
CTGCAGGGAGCGGGTCGCCGTGGGTTGTGGCGCTGCTGCTGCTGCTGTTGCTGCTCATGC
TCTCCTTCCAATCCTCTGTCCATTCCATCTGGTTCAGGCCTCTCTGGGATTCTGCTGATT
ACTAGTAGTAACTAGCTACCTACTTCTACGGTTCTACTCCACCTTGCAGCTATAATTTAC
TCATCTACCTACCTAGCATATACTATATATTATCTATCTATACATACAGGAATTAATCCA
TCCATATGTAATACGCTGTCTCTTATTTGATCTCTAGCTCGTATATACTCCATCTGTTAC
ACAATGTATGCATGTATGATACAACTTATGTTCC