Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0858100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:36212775:36223132:-1 gene:Os03g0858100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CRM1 protein (Fragment). (Os03t0858100-01);Similar to predicted protein. (Os03t0858100-02)
Sequence	ATGGCGGAGAAGCTGAGGGATCTGAGCCAGCCCATAGACGTCCCGCTGCTGGACGCCACT GTCGCCGCCTTCTACGGCACCGGATCTAAGGAAGAGAGGAATGCCGCTGATCAGATACTA CGGGATCTACAGAATAATCCAGATATGTGGCTGCAGGTGGTCCACATTCTGCAGAATTCT CACAACTTGAACACCAAGTTCTTTGCCCTCCAAGTACTTGAAAGTGTTATAAAGTATAGG TGGAATGCATTGCCAACTGAACAACGTGATGGCATCAAGAATTACATATCTGATGTTATT GTCCAGCTCTCCAGTAATGAGGCTTCTTTTCGGCAAGAGAGACTTTATGTTAATAAACTC AACATTATACTGGTGCAGGTTCTGAAGCATGAGTGGCCAGCTAGGTGGTCATCTTTCGTT CCTGACCTTGTTGCTGCTGCAAAGAGTAGTGAAACCATATGCGAAAATTGCATGGCTATA TTGAAGCTTTTAAGCGAAGAAATTTTTGATTTTTCAAGAGGTGAAATGACACAACAGAAG ATTAAAGAACTGAAGTCATCACTTAACAGTGAATTTCGTCTTATTCATGAGCTATGTTTA TATGTCCTATCTGCAACACAAAGACCTGAGCTCATCCGTGCTACACTGGCTACACTTCAT GCTTTCTTATCATGGATACCAGTGGGCTTCATATTTGAGTCACCTTTGCTGGAGACATTA CTGAAGTTCTTTCCTATGGCTGCTTATCGGAACCTTACACTCCAGTGCCTTACAGAGGTC GCTGCTCTTCAGTTTGGTGATTTTTATAATGTGCAGTATGTGAAGATGTATACGATTTTC ATGATGCAGTTGCAGGCTATTCTTCCTCCTGGAACAATTCCTGATGCTTATGCTAATGGC TCCAGTGAAGAACAGGCATTCATACAAAATCTAGCTCTTTTTTTCACTTCTTTCTTCAAG AATCACATGCGCATATTGGAGGCATCTCCAGAAAATAGAGCTGCATTACTTCTGGGCCTT GAGTACCTCATTGGAATTTCATATGTTGATGACACAGAGGTTTTTAAGGTGTGTTTGGAT TACTGGAATGTGTTTGTTTTAGAGCTATTTGAAGCACACAATCAAATGGAGCCTGCAGCA TCTGTAAACATGATGGGACTTCAGGCTCAGATGCTCCCTGGAGTTGATGGCACCATCACA GCTGTTCAGCAGAGGCGTCAGCTTTACTCAGGCCCACTATCAAAATTACGAATGTTGATG ATTTGTCGGATGGCAAAACCAGAGGAGGTACTGATTGTGGAAGATGAAAATGGGAATATT GTACGTGAAACAATGAAAGACAACGATGTTCTTGTCCAGTATAAGATTATGAGGGAAACA CTGATCTACTTGTCTCATCTTGATCATGAGGATACAGAGCAGCAAATGCTGAAGAAATTG AGTAAGCAATTAAATGGAGAAGACTGGAGTTGGAATAACCTCAATACTCTCTGCTGGGCA ATCGGATCAATATCTGGTTCTATGGTGGAGGAACAGGAAAATAGGTTCTTGGTAATGGTT ATTCGCGATTTATTAAATCTCTGTGAAATCACAAAGGGGAAGGATAATAAAGCTGTGATT GCCAGTAACATCATGTATGTTGTTGGTCAGTACCCAAGATTTCTCAGGGCTCATTGGAAG TTCTTGAAAACGGTGGTTAACAAACTATTTGAGTTCATGCATGAGATGCATCCTGGAGTT CAGGATATGGCGTGTGATACTTTTCTGAAAATTGTTCAGAAATGCAAGCGCAAATTTGTC ACACAACAGGTGGGCGAGAACGAACCATTTGTTTCTGAACTGTTGTCCAGCCTTGCCACG ACAATTGGTGATCTTGAGCCGCACCAGATTCATACGTTTTATGAATCGGTTGGCCACATG ATTCAAGCTGAATCTGATAACACTAAGAGAGATGAATACCTCAAAAGACTGATGAGCCTC CCTAATCAGAAATGGGCCGAGATAATTGGACAGGCAAGCCAAAGCATTGATATCCTGAAG AACCAGGATGTTATTAGATCTGTTCTTAACATCCTGCAGACAAACACAAGTGTTGCTAGC TCACTTGGACCACACTTTTTCCCGCAAATTTCCCTAATCTTTCTTGACATGTTGACAGTT TACAGAATGTACAGTGAGCTTGTATCAAGCACCATTGCTGAAGGGGGACCTTTTGCCTCA AGGACCTCCTTTGTAAAACTCCTTAGATCTGTCAAGAGGGAAACATTGAAATTGATTGAG ACTTTTGTGGACAAAGCTGAAGATCTACCACACATTGGGAAACAGTTTGTTCCTCCTATG ATGGATCCTATTCTTGCTGACTATGCTAGAAATGTTCCCGATGCTAGGGAATCTGAAGTT CTGTCCCTGTTTGCGACGATCATAAACAAATACAAAGGTGAAATGCTTGAAGACGTGCCT CGCATATTTGAGGCTGTTTTCCAGTGCACTCTTGAGATGATCACTAAAAACTTTGAAGAT TACCCGGAGCATCGCCTCAAATTTTTCTCTTTGCTTCGTGCGATTGGCACCCATTGCTTC CAAGCATTAATTCAGCTTTCAAGTCAGCAATTGAAACTTGTGATTGACTCTATCAACTGG GCATTTAGACATACAGAGAGAAACATCGCAGAGACTGGTCTCAGTCTATTGCTGGAAATT TTAAAGAACTTTCAGGCCTCAGGATTCCAAAATCAATTCTACAAAACTTATTTTTTGAAT ATTGAACAAGAGATCTTTGCAGTTCTGACAGACACATTCCACAAGCCTGGTTTCAAGCTT CATGTTTTGGTGCTGCAGCACTTATTTTGTGTGGTTGATGGTCTGACGGAGCCTCTCTGG GATGCATCCTCAGTACCATACCAATATACTGACAACGCTATGTTTGTCCGAGATTACACA ATAAAACTTTTAGGTTCATCATTTCCCAACATGACACCTACTGAGGTTACAAAATTTGTT GATGGGCTTCTTAGTTCAAAACATGACCTTCCAAGCTTCAAAAACCATATTAGGGATTTC CTGGTGCAATCAAAGGAGTTCTCGGCTCAGGATAATAAGGATTTGTATGCTGAAGAGGCT GCTGCACAAAGAGAGAGGGAGCGTCAACGAATGCTTGCCATTCCAGGGCTTATTGCCCCA AGCGAATTACAAGATGAGATGGTTGATTCATAA

Peptide Sequence

PEP ID	Os03t0858100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:36212775:36223132:-1 gene:Os03g0858100 transcript:Os03t0858100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CRM1 protein (Fragment). (Os03t0858100-01);Similar to predicted protein. (Os03t0858100-02)
Sequence	MAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERNAADQILRDLQNNPDMWLQVVHILQNS HNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQERLYVNKL NIILVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQK IKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETL LKFFPMAAYRNLTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANG SSEEQAFIQNLALFFTSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEVFKVCLD YWNVFVLELFEAHNQMEPAASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRMLM ICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKKL SKQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAVI ASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCKRKFV TQQVGENEPFVSELLSSLATTIGDLEPHQIHTFYESVGHMIQAESDNTKRDEYLKRLMSL PNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLTV YRMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHIGKQFVPPM MDPILADYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFED YPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSLLLEI LKNFQASGFQNQFYKTYFLNIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPLW DASSVPYQYTDNAMFVRDYTIKLLGSSFPNMTPTEVTKFVDGLLSSKHDLPSFKNHIRDF LVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS

Transcript Sequence

Transcript ID	Os03t0858100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:36212775:36223132:-1 gene:Os03g0858100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CRM1 protein (Fragment). (Os03t0858100-01);Similar to predicted protein. (Os03t0858100-02)
Sequence	GTACTTTCCCCGCAACCCCAAACAACAAGGAAGGAAGACGCTCCTCCCCTCCCATCTCTT AAACCCCAAAAAAACCAAAATAAAAATCCTCCTCCTCCTCCGCCTCCGCTTCCCTTCCCT TCCCCGATAGAAATCCATCCCTCCCGCCGCCGCCGCCGCCGCCGCTCCTAGGGTTCCGGC ACCTCCCCGAATCCCCCCCTCACTTCGACCCCTGTTCGCTTCACCCGCCGCCGCCATGGC GGAGAAGCTGAGGGATCTGAGCCAGCCCATAGACGTCCCGCTGCTGGACGCCACTGTCGC CGCCTTCTACGGCACCGGATCTAAGGAAGAGAGGAATGCCGCTGATCAGATACTACGGGA TCTACAGAATAATCCAGATATGTGGCTGCAGGTGGTCCACATTCTGCAGAATTCTCACAA CTTGAACACCAAGTTCTTTGCCCTCCAAGTACTTGAAAGTGTTATAAAGTATAGGTGGAA TGCATTGCCAACTGAACAACGTGATGGCATCAAGAATTACATATCTGATGTTATTGTCCA GCTCTCCAGTAATGAGGCTTCTTTTCGGCAAGAGAGACTTTATGTTAATAAACTCAACAT TATACTGGTGCAGGTTCTGAAGCATGAGTGGCCAGCTAGGTGGTCATCTTTCGTTCCTGA CCTTGTTGCTGCTGCAAAGAGTAGTGAAACCATATGCGAAAATTGCATGGCTATATTGAA GCTTTTAAGCGAAGAAATTTTTGATTTTTCAAGAGGTGAAATGACACAACAGAAGATTAA AGAACTGAAGTCATCACTTAACAGTGAATTTCGTCTTATTCATGAGCTATGTTTATATGT CCTATCTGCAACACAAAGACCTGAGCTCATCCGTGCTACACTGGCTACACTTCATGCTTT CTTATCATGGATACCAGTGGGCTTCATATTTGAGTCACCTTTGCTGGAGACATTACTGAA GTTCTTTCCTATGGCTGCTTATCGGAACCTTACACTCCAGTGCCTTACAGAGGTCGCTGC TCTTCAGTTTGGTGATTTTTATAATGTGCAGTATGTGAAGATGTATACGATTTTCATGAT GCAGTTGCAGGCTATTCTTCCTCCTGGAACAATTCCTGATGCTTATGCTAATGGCTCCAG TGAAGAACAGGCATTCATACAAAATCTAGCTCTTTTTTTCACTTCTTTCTTCAAGAATCA CATGCGCATATTGGAGGCATCTCCAGAAAATAGAGCTGCATTACTTCTGGGCCTTGAGTA CCTCATTGGAATTTCATATGTTGATGACACAGAGGTTTTTAAGGTGTGTTTGGATTACTG GAATGTGTTTGTTTTAGAGCTATTTGAAGCACACAATCAAATGGAGCCTGCAGCATCTGT AAACATGATGGGACTTCAGGCTCAGATGCTCCCTGGAGTTGATGGCACCATCACAGCTGT TCAGCAGAGGCGTCAGCTTTACTCAGGCCCACTATCAAAATTACGAATGTTGATGATTTG TCGGATGGCAAAACCAGAGGAGGTACTGATTGTGGAAGATGAAAATGGGAATATTGTACG TGAAACAATGAAAGACAACGATGTTCTTGTCCAGTATAAGATTATGAGGGAAACACTGAT CTACTTGTCTCATCTTGATCATGAGGATACAGAGCAGCAAATGCTGAAGAAATTGAGTAA GCAATTAAATGGAGAAGACTGGAGTTGGAATAACCTCAATACTCTCTGCTGGGCAATCGG ATCAATATCTGGTTCTATGGTGGAGGAACAGGAAAATAGGTTCTTGGTAATGGTTATTCG CGATTTATTAAATCTCTGTGAAATCACAAAGGGGAAGGATAATAAAGCTGTGATTGCCAG TAACATCATGTATGTTGTTGGTCAGTACCCAAGATTTCTCAGGGCTCATTGGAAGTTCTT GAAAACGGTGGTTAACAAACTATTTGAGTTCATGCATGAGATGCATCCTGGAGTTCAGGA TATGGCGTGTGATACTTTTCTGAAAATTGTTCAGAAATGCAAGCGCAAATTTGTCACACA ACAGGTGGGCGAGAACGAACCATTTGTTTCTGAACTGTTGTCCAGCCTTGCCACGACAAT TGGTGATCTTGAGCCGCACCAGATTCATACGTTTTATGAATCGGTTGGCCACATGATTCA AGCTGAATCTGATAACACTAAGAGAGATGAATACCTCAAAAGACTGATGAGCCTCCCTAA TCAGAAATGGGCCGAGATAATTGGACAGGCAAGCCAAAGCATTGATATCCTGAAGAACCA GGATGTTATTAGATCTGTTCTTAACATCCTGCAGACAAACACAAGTGTTGCTAGCTCACT TGGACCACACTTTTTCCCGCAAATTTCCCTAATCTTTCTTGACATGTTGACAGTTTACAG AATGTACAGTGAGCTTGTATCAAGCACCATTGCTGAAGGGGGACCTTTTGCCTCAAGGAC CTCCTTTGTAAAACTCCTTAGATCTGTCAAGAGGGAAACATTGAAATTGATTGAGACTTT TGTGGACAAAGCTGAAGATCTACCACACATTGGGAAACAGTTTGTTCCTCCTATGATGGA TCCTATTCTTGCTGACTATGCTAGAAATGTTCCCGATGCTAGGGAATCTGAAGTTCTGTC CCTGTTTGCGACGATCATAAACAAATACAAAGGTGAAATGCTTGAAGACGTGCCTCGCAT ATTTGAGGCTGTTTTCCAGTGCACTCTTGAGATGATCACTAAAAACTTTGAAGATTACCC GGAGCATCGCCTCAAATTTTTCTCTTTGCTTCGTGCGATTGGCACCCATTGCTTCCAAGC ATTAATTCAGCTTTCAAGTCAGCAATTGAAACTTGTGATTGACTCTATCAACTGGGCATT TAGACATACAGAGAGAAACATCGCAGAGACTGGTCTCAGTCTATTGCTGGAAATTTTAAA GAACTTTCAGGCCTCAGGATTCCAAAATCAATTCTACAAAACTTATTTTTTGAATATTGA ACAAGAGATCTTTGCAGTTCTGACAGACACATTCCACAAGCCTGGTTTCAAGCTTCATGT TTTGGTGCTGCAGCACTTATTTTGTGTGGTTGATGGTCTGACGGAGCCTCTCTGGGATGC ATCCTCAGTACCATACCAATATACTGACAACGCTATGTTTGTCCGAGATTACACAATAAA ACTTTTAGGTTCATCATTTCCCAACATGACACCTACTGAGGTTACAAAATTTGTTGATGG GCTTCTTAGTTCAAAACATGACCTTCCAAGCTTCAAAAACCATATTAGGGATTTCCTGGT GCAATCAAAGGAGTTCTCGGCTCAGGATAATAAGGATTTGTATGCTGAAGAGGCTGCTGC ACAAAGAGAGAGGGAGCGTCAACGAATGCTTGCCATTCCAGGGCTTATTGCCCCAAGCGA ATTACAAGATGAGATGGTTGATTCATAATTCTGTGATTCAGCCTTGCTAATCCAGTTCCA TTTCTTGCTTTGGCCTCCAAACCTCTGGAGCCCTCAACACCCCATTGCCCAAGTTCTCTT CCAGGGTGGTGAAAGAAGGTGCCTGCTGTAATTTTATTTTCGGTTACCTCCACTTGGTGC TGATTGCGAGATTTCTGCTAGTCAATAGGAAAGGCCAACTCAATTTTGTCGCAAGAGCTG TTTTGGACTGCCATTGGTTTGCAGTATGAGCTGTCAGGTTAATGTGATGACAGCAGCTCT TGTGCTCCTGTATTTTGCTAACATTGCTGCGTGTGCGGGGCCATCATATAGTATGATCAC GGTACAACATTGTATCATGATTTTTAGTTTAGTTTATAGATCGGCCGCATTCTGTATTGT GGACAAGATTCAGGATAGAAACTTATATTCGTAGTGTAC