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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0857500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:36184687:36186335:-1 gene:Os03g0857500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF303, acetylesterase putative domain containing protein. (Os03t0857500-01);Similar to H0201G08.9 protein. (Os03t0857500-02)
Sequence

TTGCTGCTGCTTCCGGCGGCGGCGGCGGCTGTGTCCCTCCCTCCGTCGAACAAGGTGGTG
TTCATCCTGGGAGGGCAGTCGAACATGGCGGGGCGCGGGGGCGTGGTGGGGTCCCACTGG
GACGGCATGGTTCCCCCGGAGTGCGCCCCCAACCCCTCCATCCTCCGCCTCTCCCCGCAG
CTCCGATGGGAGGAGGCCCACGAGCCGCTCCACAACGGCATCGACTCCAACCGCACCTGC
GGCGTCGGTCCCGGGATGTCCTTCGCTAACGCCCTCCTTCGCTCCGGCCAGTTCCCTGTC
ATCGGCCTCGTCCCCTGCGCCGTCGGCGGCACCAGGATGGCCGACTGGGCCAAGGGCACC
GACCTCTACTCCGATCTCGTCCGCCGCTCCAGGGTCGCCCTCGAGACCGGCGGCCGCATC
GGCGCTGTCCTCTGGTACCAGGGGGAGAGCGACACCGTGCGCTGGGCCGACGCCAACGAG
TACGCCCGCCGGATGGCCATGCTCGTCCGCAACCTGCGCGCCGATCTCGCCATGCCACAC
CTTCTCCTCATCCAGGTAGGACTAGCATCAGGGCTTGGGCAATATACTGAAGTAGTAAGG
GAAGCTCAGAAAGGGATCAAACTTCGAAACGTGAGATTTGTTGATGCAAAGGGTTTGCCA
CTAGAAGATGGCCATCTGCACCTTAGCACCCAAGCGCAAGTCCAGCTTGGACATATGTTG
GCTCAAGCCTATTTGAACTATGGTACTTCCACGCTCTAG

Peptide Sequence

PEP ID

Os03t0857500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:36184687:36186335:-1 gene:Os03g0857500 transcript:Os03t0857500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF303, acetylesterase putative domain containing protein. (Os03t0857500-01);Similar to H0201G08.9 protein. (Os03t0857500-02)
Sequence

LLLLPAAAAAVSLPPSNKVVFILGGQSNMAGRGGVVGSHWDGMVPPECAPNPSILRLSPQ
LRWEEAHEPLHNGIDSNRTCGVGPGMSFANALLRSGQFPVIGLVPCAVGGTRMADWAKGT
DLYSDLVRRSRVALETGGRIGAVLWYQGESDTVRWADANEYARRMAMLVRNLRADLAMPH
LLLIQVGLASGLGQYTEVVREAQKGIKLRNVRFVDAKGLPLEDGHLHLSTQAQVQLGHML
AQAYLNYGTSTL

Transcript Sequence

Transcript ID

Os03t0857500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:36184687:36186335:-1 gene:Os03g0857500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF303, acetylesterase putative domain containing protein. (Os03t0857500-01);Similar to H0201G08.9 protein. (Os03t0857500-02)
Sequence

GTTGCTGCTGCTTCCGGCGGCGGCGGCGGCTGTGTCCCTCCCTCCGTCGAACAAGGTGGT
GTTCATCCTGGGAGGGCAGTCGAACATGGCGGGGCGCGGGGGCGTGGTGGGGTCCCACTG
GGACGGCATGGTTCCCCCGGAGTGCGCCCCCAACCCCTCCATCCTCCGCCTCTCCCCGCA
GCTCCGATGGGAGGAGGCCCACGAGCCGCTCCACAACGGCATCGACTCCAACCGCACCTG
CGGCGTCGGTCCCGGGATGTCCTTCGCTAACGCCCTCCTTCGCTCCGGCCAGTTCCCTGT
CATCGGCCTCGTCCCCTGCGCCGTCGGCGGCACCAGGATGGCCGACTGGGCCAAGGGCAC
CGACCTCTACTCCGATCTCGTCCGCCGCTCCAGGGTCGCCCTCGAGACCGGCGGCCGCAT
CGGCGCTGTCCTCTGGTACCAGGGGGAGAGCGACACCGTGCGCTGGGCCGACGCCAACGA
GTACGCCCGCCGGATGGCCATGCTCGTCCGCAACCTGCGCGCCGATCTCGCCATGCCACA
CCTTCTCCTCATCCAGGTAGGACTAGCATCAGGGCTTGGGCAATATACTGAAGTAGTAAG
GGAAGCTCAGAAAGGGATCAAACTTCGAAACGTGAGATTTGTTGATGCAAAGGGTTTGCC
ACTAGAAGATGGCCATCTGCACCTTAGCACCCAAGCGCAAGTCCAGCTTGGACATATGTT
GGCTCAAGCCTATTTGAACTATGGTACTTCCACGCTCTAGTCCTCTCTGTGTTGTTTTTC
TTTTATCAGATAAATAGCTAAGAGACTACGCACCTTATGTTCTACTTTTCTTATTTAGTT
TCATGGACCACTCATTCTTATGATTATTGAATTGGCTTGGTATAATTAAATTTTCC