Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0856200-04
CDS Infomation	cds chromosome:IRGSP-1.0:3:36114048:36118468:1 gene:Os03g0856200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of Ku80 description:Similar to KAP-2. (Os03t0856200-01);Similar to Longin-like. (Os03t0856200-02);Similar to KAP-2. (Os03t0856200-03);Similar to KAP-2. (Os03t0856200-04)
Sequence	ATGGCTCGCAACAAGGAAGCATTGGTTTTGCTATTGGATGTTGGCCCATCCATGCATGGC GTTCTGCAAGAAGTTGAGAATATCTGCTCCACCCTTGTGCATAAGAAGCTAGTTTATAAT AGGAGTGATGAGATCGGTGTTGTCCTTTTTGGAACTAAAGAAACAAGCAACGAACTCGCC AAGGAGCTTGGGGGCTATAAGCATGTGGTGGTTGCTCGTGATATTAAAGTTGTTGATGAA GAAACAACAAATGCTCTGCAAAACCTTCCAAGGGGAACTTCCCCTGGTGACTTTTTGGAT GCTATTGTTGTTGGTTTGGATATGCTGATAAGAAAATTTGGAAATATCAAAGGAAAACAG CGTATGTGTCTAGTCACTGATGCACAACATCCATTAAGAGATCCACCCCAAGGGACAAAA AAGGATCAGGTGGACACTATTGCAGACCAGATGAAAAGACACGAAATCAAGATGGACTGC ATTATTTTCAGAGAATCTGGAGTTCGTCACAATGCTGTAATGGATGAAAACGACCAATTA TTATACCACTTCAGAGAGAGGTCAGTAACAAAGGTAGTTCATGTTGACAGCCCAACGTCA CTCTTAGGTGCTCTCAGGACTAGAAATGTACTTCCAGTTACTGTCTTCAGGGGAGACTTG GAAGTGAGCTCTAGCTTTAAAATAAAGGTGTGGGTCTATAAGAAAACATCTGAGGAGAAA TTCCCCACTTTGAAGAAGTATTCTGATAAGGCTCCTGCAAGTGATAAATTTGCATCTCAT GAAGTCAAAGTGGATTATGAGTACAAAAGTGTTCTAGAACCAGACACAGTCGTTCCACCA GATCAAAGAATTAAAGGATATCTTTATGGTCCACAAGTTGTTCCTATATCATCCGCTGAA TGGGAAGCTGTCAAGTTCAAACCTGAGAAAGGTGTGAAGCTTCTAGGTTTTACAGATAGA TCCAGCATATCTCGGCACTATTTTATGAAAGATGTGTTCTCCTTTGTTCCGGAACCAGGA AACACAAAAGCAGTTGCTGCCGTTTCTGCCTTAGCTAGAGCAATGAGTGAAATGAACAAG GTTGCAATTTTACGATGCGTGTGGAGGCAAGGTCAAGGGAATGTTGCTTTGGGTGTATTG ACACCAAACATATCATCAGCAAAAAATGTTCTGGATTCCTTTTACTTCAATATACTTCCA TTTGCTGAGGACATCAGAGAGTTTCAGTTTCGGTCCTTCAGCAGCCTGCCATCATCATCT CAGCCTACCAAGGAACAGCAGGAAGCTGCAGATAACCTGGTAAAGATGTTAGATCTTGCA CCACCTGGAAGGGAAGAGATCCTTAAGCCTGATTTCACTCCGAATCCCATGTTGGAGAGA TTCTACAGGTACCTTGATCTCAAGTCAAAGCAGCCGGATGCAAATGTCCCACCCCTCGAC AAATGTCTAAAGAAGATAACTGAACCTGATCCTGATGTCATTGATTATCAAGCACCGCTA ATAAAAAAATTAGGCAATGTATTTGAGCTGAAGGAGAACCCC

Peptide Sequence

PEP ID	Os03t0856200-04
PEP Infomation	pep chromosome:IRGSP-1.0:3:36114048:36118468:1 gene:Os03g0856200 transcript:Os03t0856200-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of Ku80 description:Similar to KAP-2. (Os03t0856200-01);Similar to Longin-like. (Os03t0856200-02);Similar to KAP-2. (Os03t0856200-03);Similar to KAP-2. (Os03t0856200-04)
Sequence	MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNIKGKQ RMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRESGVRHNAVMDENDQL LYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTSEEK FPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPISSAE WEAVKFKPEKGVKLLGFTDRSSISRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSEMNK VAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLPSSS QPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVPPLD KCLKKITEPDPDVIDYQAPLIKKLGNVFELKENP

Transcript Sequence

Transcript ID	Os03t0856200-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:36114048:36118468:1 gene:Os03g0856200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice homolog of Ku80 description:Similar to KAP-2. (Os03t0856200-01);Similar to Longin-like. (Os03t0856200-02);Similar to KAP-2. (Os03t0856200-03);Similar to KAP-2. (Os03t0856200-04)
Sequence	AAGTCGCCATTCGTCTTCTCTCTCTCTCTCTCCGCGCCGGCAAAGCGGCCGGTGGCGGCG CCGACGAGTCAGCAAGCGGCAGCGCGGAAGTCGACGGCCGCGAGAGTGGGAGGCGGCCGG TCGGTGATCGAGTGCGGAAGTCTTGGTGAAGGCCCACCGCGTCGCGTCCGTGTCCTCCTC GAGCCGCGTCGTCGTCGACCTCCTTCAATTCCCTCATGGCTCGCAACAAGGAAGCATTGG TTTTGCTATTGGATGTTGGCCCATCCATGCATGGCGTTCTGCAAGAAGTTGAGAATATCT GCTCCACCCTTGTGCATAAGAAGCTAGTTTATAATAGGAGTGATGAGATCGGTGTTGTCC TTTTTGGAACTAAAGAAACAAGCAACGAACTCGCCAAGGAGCTTGGGGGCTATAAGCATG TGGTGGTTGCTCGTGATATTAAAGTTGTTGATGAAGAAACAACAAATGCTCTGCAAAACC TTCCAAGGGGAACTTCCCCTGGTGACTTTTTGGATGCTATTGTTGTTGGTTTGGATATGC TGATAAGAAAATTTGGAAATATCAAAGGAAAACAGCGTATGTGTCTAGTCACTGATGCAC AACATCCATTAAGAGATCCACCCCAAGGGACAAAAAAGGATCAGGTGGACACTATTGCAG ACCAGATGAAAAGACACGAAATCAAGATGGACTGCATTATTTTCAGAGAATCTGGAGTTC GTCACAATGCTGTAATGGATGAAAACGACCAATTATTATACCACTTCAGAGAGAGGTCAG TAACAAAGGTAGTTCATGTTGACAGCCCAACGTCACTCTTAGGTGCTCTCAGGACTAGAA ATGTACTTCCAGTTACTGTCTTCAGGGGAGACTTGGAAGTGAGCTCTAGCTTTAAAATAA AGGTGTGGGTCTATAAGAAAACATCTGAGGAGAAATTCCCCACTTTGAAGAAGTATTCTG ATAAGGCTCCTGCAAGTGATAAATTTGCATCTCATGAAGTCAAAGTGGATTATGAGTACA AAAGTGTTCTAGAACCAGACACAGTCGTTCCACCAGATCAAAGAATTAAAGGATATCTTT ATGGTCCACAAGTTGTTCCTATATCATCCGCTGAATGGGAAGCTGTCAAGTTCAAACCTG AGAAAGGTGTGAAGCTTCTAGGTTTTACAGATAGATCCAGCATATCTCGGCACTATTTTA TGAAAGATGTGTTCTCCTTTGTTCCGGAACCAGGAAACACAAAAGCAGTTGCTGCCGTTT CTGCCTTAGCTAGAGCAATGAGTGAAATGAACAAGGTTGCAATTTTACGATGCGTGTGGA GGCAAGGTCAAGGGAATGTTGCTTTGGGTGTATTGACACCAAACATATCATCAGCAAAAA ATGTTCTGGATTCCTTTTACTTCAATATACTTCCATTTGCTGAGGACATCAGAGAGTTTC AGTTTCGGTCCTTCAGCAGCCTGCCATCATCATCTCAGCCTACCAAGGAACAGCAGGAAG CTGCAGATAACCTGGTAAAGATGTTAGATCTTGCACCACCTGGAAGGGAAGAGATCCTTA AGCCTGATTTCACTCCGAATCCCATGTTGGAGAGATTCTACAGGTACCTTGATCTCAAGT CAAAGCAGCCGGATGCAAATGTCCCACCCCTCGACAAATGTCTAAAGAAGATAACTGAAC CTGATCCTGATGTCATTGATTATCAAGCACCGCTAATAAAAAAATTAGGCAATGTATTTG AGCTGAAGGAGAACCCC