Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0854600-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:35994445:35995865:-1 gene:Os03g0854600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 24 description:Concanavalin A-like lectin/glucanase domain containing protein. (Os03t0854600-01);Concanavalin A-like lectin/glucanase domain containing protein. (Os03t0854600-02)
Sequence	ATGGCGGCGGCGGTGCTGGCGGTGCTGTGGGCGTGCATGATGATGATGAGCCTAGCTCCG GCGAGCTTGGCGGCGTCGGGGTTCGAGGAGGTGCCGACGATCGCGTTCGACGAGGGGTTC TCGCCGCTGTTCGGGGAGGACAACATGGTGAAGTCGGCCGACGGGCGCACGGTGAGCATC ACCCTCAACCGCTACACCGGCTCCGGCTTCATCTCCTCCGACTACTACCACCATGGCTTC TTCAGCGCCTCCATCAAGCTCCCCAAGGACCACACCGCCGGCGTAGTCGTCGCCTTCTAC CTGTCTAATGGAGATGTGTTCGAGAAGACGCACGACGAGCTGGACTTCGAGTTCTTGGGC AACAGGTACAGGCACGAGTGGAAGATGCAGACGAACGTGTACGGCAATGGCAGCACGGAC CGTGGGCGGGAGGAGAGGTATCTGATGCCGTTCGACCCAACCGCCGACGCCCACCGCTTC TCCATCCTCTGGCACTCCCGCCTCATCGTCTTCTACGTCGACGGCGTCCCCATCCGCGAG GTCCCGCGCACCGCCGCCATGGGCGCCGACTACCCCTCCAAGCCCATGGCGCTCTACGTC ACCATCTGGGACGGCTCCACCTGGGCCACCGACAACGGCAAGTACAAGGTCAACTACAAG CGCGGGCCCTTCACCGCCGTCTTCTCCGACCTCGTCCTCCGCGGCTGCACCGCCCGCTCC GACATCCGCCTCGCCACCACCGCCGACGACCAGGACAGGTGCGCCGCGGCGGAGGAGGAC CTCATGGAGAGCGACGAGTACTCCTCGACCATGGCCATGACGGCGAGGAAGCGGATGGCG ATGCGGCGGTTCAGGCAGCGGCAGATGCTCTACACCGTGTGCTACGACACCAACAGGTAC CCGGAGCCGTTCCCGGAGTGCGACGTCAACATGGCGGAGCGGCAGATGTACTGGCAGTGG GGGGAGTCCAAGGTGGTTCGCCCCCGCGTCCGACCACGACCCGGCCGCCGCTCCAAGCGC CGCCCCTCGCCGGAGGCCACGGCCATCCCGCCGCCCGTGCTCGTCTCCTTGCAGCAAGCT GACTAG

Peptide Sequence

PEP ID	Os03t0854600-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:35994445:35995865:-1 gene:Os03g0854600 transcript:Os03t0854600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 24 description:Concanavalin A-like lectin/glucanase domain containing protein. (Os03t0854600-01);Concanavalin A-like lectin/glucanase domain containing protein. (Os03t0854600-02)
Sequence	MAAAVLAVLWACMMMMSLAPASLAASGFEEVPTIAFDEGFSPLFGEDNMVKSADGRTVSI TLNRYTGSGFISSDYYHHGFFSASIKLPKDHTAGVVVAFYLSNGDVFEKTHDELDFEFLG NRYRHEWKMQTNVYGNGSTDRGREERYLMPFDPTADAHRFSILWHSRLIVFYVDGVPIRE VPRTAAMGADYPSKPMALYVTIWDGSTWATDNGKYKVNYKRGPFTAVFSDLVLRGCTARS DIRLATTADDQDRCAAAEEDLMESDEYSSTMAMTARKRMAMRRFRQRQMLYTVCYDTNRY PEPFPECDVNMAERQMYWQWGESKVVRPRVRPRPGRRSKRRPSPEATAIPPPVLVSLQQA D

Transcript Sequence

Transcript ID	Os03t0854600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35994445:35995865:-1 gene:Os03g0854600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 24 description:Concanavalin A-like lectin/glucanase domain containing protein. (Os03t0854600-01);Concanavalin A-like lectin/glucanase domain containing protein. (Os03t0854600-02)
Sequence	ACTCTTGTTGCTTAGCTACCTAGCTAGCTAGCTTTCCTCTCCACTCCATCCACCCACGCA CCTCAATCGATCGATCCTCCATGGCGGCGGCGGTGCTGGCGGTGCTGTGGGCGTGCATGA TGATGATGAGCCTAGCTCCGGCGAGCTTGGCGGCGTCGGGGTTCGAGGAGGTGCCGACGA TCGCGTTCGACGAGGGGTTCTCGCCGCTGTTCGGGGAGGACAACATGGTGAAGTCGGCCG ACGGGCGCACGGTGAGCATCACCCTCAACCGCTACACCGGCTCCGGCTTCATCTCCTCCG ACTACTACCACCATGGCTTCTTCAGCGCCTCCATCAAGCTCCCCAAGGACCACACCGCCG GCGTAGTCGTCGCCTTCTACCTGTCTAATGGAGATGTGTTCGAGAAGACGCACGACGAGC TGGACTTCGAGTTCTTGGGCAACAGGTACAGGCACGAGTGGAAGATGCAGACGAACGTGT ACGGCAATGGCAGCACGGACCGTGGGCGGGAGGAGAGGTATCTGATGCCGTTCGACCCAA CCGCCGACGCCCACCGCTTCTCCATCCTCTGGCACTCCCGCCTCATCGTCTTCTACGTCG ACGGCGTCCCCATCCGCGAGGTCCCGCGCACCGCCGCCATGGGCGCCGACTACCCCTCCA AGCCCATGGCGCTCTACGTCACCATCTGGGACGGCTCCACCTGGGCCACCGACAACGGCA AGTACAAGGTCAACTACAAGCGCGGGCCCTTCACCGCCGTCTTCTCCGACCTCGTCCTCC GCGGCTGCACCGCCCGCTCCGACATCCGCCTCGCCACCACCGCCGACGACCAGGACAGGT GCGCCGCGGCGGAGGAGGACCTCATGGAGAGCGACGAGTACTCCTCGACCATGGCCATGA CGGCGAGGAAGCGGATGGCGATGCGGCGGTTCAGGCAGCGGCAGATGCTCTACACCGTGT GCTACGACACCAACAGGTACCCGGAGCCGTTCCCGGAGTGCGACGTCAACATGGCGGAGC GGCAGATGTACTGGCAGTGGGGGGAGTCCAAGGTGGTTCGCCCCCGCGTCCGACCACGAC CCGGCCGCCGCTCCAAGCGCCGCCCCTCGCCGGAGGCCACGGCCATCCCGCCGCCCGTGC TCGTCTCCTTGCAGCAAGCTGACTAGTCTTTGATTAGAATATTCTATTCTATGATGAGGC TCTAGCTCCATCATAATTCTTTGATTAATTTTGCTTCCTTCACATGCGTACATCGATCAT ACTGTAATTAGTACCCCCTGATGATAGAGATTAATTTATTGTTACTGCTGCTTCTTCACG ACGAAC