Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0854500-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:35989220:35992240:1 gene:Os03g0854500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A1 description:Similar to Heat shock transcription factor 31 (Fragment). (Os03t0854500-01);Similar to Heat shock transcription factor 31 (Fragment). (Os03t0854500-02)
Sequence	ATGGAGGCCGCCGTTGCTGCTGCGGCTGCGGCCGCCGGGGCGGTGACGACGGCGGTCGCG CCTCCGCCCGGCGCGGCGGTCAGCAACGGGGTGGCGACCGCGCCGCCGCCGTTCCTGATG AAGACGTACGAGATGGTGGACGACCCGGCCACCGATGCCGTCGTCTCATGGGGCCCCGGG AACAACAGCTTCGTTGTGTGGAACACCCCCGAGTTCGCGCGCGACCTCCTCCCCAAGTAC TTCAAGCACAGCAACTTCTCCTCCTTCGTCAGGCAGCTCAACACCTACGGATTTAGGAAA GTTGATCCAGATAGGTGGGAGTTTGCAAACGAAGGTTTTCTTAGAGGACAAAAGCATCTA CTGAAGACCATCAACAGAAGGAAACCAACTCATGGAAACAACCAAGTTCAGCAGCCTCAG TTGCCAGCTGCTCCTGTACCTGCTTGCGTAGAAGTGGGGAAGTTTGGGATGGAAGAAGAG ATTGAGATGCTCAAAAGGGATAAAAATGTTTTAATGCAGGAACTTGTCAGGCTGAGACAA CAACAGCAGACAACAGATCATCAGCTGCAGACTTTGGGCAAGCGTCTTCAAGGAATGGAG CAACGGCAACAACAAATGATGTCTTTCCTGGCTAAGGCAATGCATAGTCCTGGCTTCCTA GCACAATTTGTACAGCAAAACGAAAACAGCAGAAGAAGAATAGTTGCTAGTAACAAAAAG AGGAGGCTACCAAAGCAGGATGGTTCGTTGGACTCTGAAAGTGCTTCATTGGATGGACAA ATAGTAAAATATCAACCTATGATCAATGAAGCAGCCAAAGCGATGCTAAGGAAGATCCTA AAGCTAGATTCTTCACATAGATTTGAATCCATGGGCAATTCAGATAATTTCCTTCTTGAG AATTATATGCCAAATGGTCAAGGTCTTGACAGCTCTTCATCAACTCGGAATTCTGGTGTT ACCCTTGCAGAGGTCCCAGCTAACTCAGGTTTGCCATATGTAGCTACAAGCTCTGGACTT TCAGCTATTTGTTCAACTTCGACTCCTCAGATTCAGTGCCCAGTTGTTTTGGACAACGGC ATACCCAAAGAAGTTCCAAACATGAGTGCGGTGCCTTCTGTTCCGAAGGCTGTGGCTCCA GGCCCAACTGATATCAATATTCTGGAATTCCCAGATTTGCAAGATATAGTAGCTGAAGAA AATGTTGATATTCCTGGAGGGGGCTTTGAAATGCCTGGTCCTGAGGGTGTATTCTCTTTG CCTGAAGAAGGTGATGATAGTGTTCCCATTGAGACTGATGAGATTTTGTACAACGATGAC ACCCAGAAACTTCCTGCTATCATTGATTCTTTCTGGGAACAGTTCCTGGTGGCTAGCCCT CTATCTGTTGATAATGATGAAGTCGATTCAGGTGTACTAGACCAAAAGGAAACACAACAG GGGAATGGATGGACCAAAGCTGAAAACATGGCTAACCTTACAGAACAGATGGGCCTCCTG TCATCACACCATACAGGATGA

Peptide Sequence

PEP ID	Os03t0854500-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:35989220:35992240:1 gene:Os03g0854500 transcript:Os03t0854500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A1 description:Similar to Heat shock transcription factor 31 (Fragment). (Os03t0854500-01);Similar to Heat shock transcription factor 31 (Fragment). (Os03t0854500-02)
Sequence	MEAAVAAAAAAAGAVTTAVAPPPGAAVSNGVATAPPPFLMKTYEMVDDPATDAVVSWGPG NNSFVVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHL LKTINRRKPTHGNNQVQQPQLPAAPVPACVEVGKFGMEEEIEMLKRDKNVLMQELVRLRQ QQQTTDHQLQTLGKRLQGMEQRQQQMMSFLAKAMHSPGFLAQFVQQNENSRRRIVASNKK RRLPKQDGSLDSESASLDGQIVKYQPMINEAAKAMLRKILKLDSSHRFESMGNSDNFLLE NYMPNGQGLDSSSSTRNSGVTLAEVPANSGLPYVATSSGLSAICSTSTPQIQCPVVLDNG IPKEVPNMSAVPSVPKAVAPGPTDINILEFPDLQDIVAEENVDIPGGGFEMPGPEGVFSL PEEGDDSVPIETDEILYNDDTQKLPAIIDSFWEQFLVASPLSVDNDEVDSGVLDQKETQQ GNGWTKAENMANLTEQMGLLSSHHTG

Transcript Sequence

Transcript ID	Os03t0854500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35989220:35992240:1 gene:Os03g0854500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A1 description:Similar to Heat shock transcription factor 31 (Fragment). (Os03t0854500-01);Similar to Heat shock transcription factor 31 (Fragment). (Os03t0854500-02)
Sequence	GACCCTCACCACGCCTCCCCATACGGATCGCCTCATGGAGGCCGCCGTTGCTGCTGCGGC TGCGGCCGCCGGGGCGGTGACGACGGCGGTCGCGCCTCCGCCCGGCGCGGCGGTCAGCAA CGGGGTGGCGACCGCGCCGCCGCCGTTCCTGATGAAGACGTACGAGATGGTGGACGACCC GGCCACCGATGCCGTCGTCTCATGGGGCCCCGGGAACAACAGCTTCGTTGTGTGGAACAC CCCCGAGTTCGCGCGCGACCTCCTCCCCAAGTACTTCAAGCACAGCAACTTCTCCTCCTT CGTCAGGCAGCTCAACACCTACGGATTTAGGAAAGTTGATCCAGATAGGTGGGAGTTTGC AAACGAAGGTTTTCTTAGAGGACAAAAGCATCTACTGAAGACCATCAACAGAAGGAAACC AACTCATGGAAACAACCAAGTTCAGCAGCCTCAGTTGCCAGCTGCTCCTGTACCTGCTTG CGTAGAAGTGGGGAAGTTTGGGATGGAAGAAGAGATTGAGATGCTCAAAAGGGATAAAAA TGTTTTAATGCAGGAACTTGTCAGGCTGAGACAACAACAGCAGACAACAGATCATCAGCT GCAGACTTTGGGCAAGCGTCTTCAAGGAATGGAGCAACGGCAACAACAAATGATGTCTTT CCTGGCTAAGGCAATGCATAGTCCTGGCTTCCTAGCACAATTTGTACAGCAAAACGAAAA CAGCAGAAGAAGAATAGTTGCTAGTAACAAAAAGAGGAGGCTACCAAAGCAGGATGGTTC GTTGGACTCTGAAAGTGCTTCATTGGATGGACAAATAGTAAAATATCAACCTATGATCAA TGAAGCAGCCAAAGCGATGCTAAGGAAGATCCTAAAGCTAGATTCTTCACATAGATTTGA ATCCATGGGCAATTCAGATAATTTCCTTCTTGAGAATTATATGCCAAATGGTCAAGGTCT TGACAGCTCTTCATCAACTCGGAATTCTGGTGTTACCCTTGCAGAGGTCCCAGCTAACTC AGGTTTGCCATATGTAGCTACAAGCTCTGGACTTTCAGCTATTTGTTCAACTTCGACTCC TCAGATTCAGTGCCCAGTTGTTTTGGACAACGGCATACCCAAAGAAGTTCCAAACATGAG TGCGGTGCCTTCTGTTCCGAAGGCTGTGGCTCCAGGCCCAACTGATATCAATATTCTGGA ATTCCCAGATTTGCAAGATATAGTAGCTGAAGAAAATGTTGATATTCCTGGAGGGGGCTT TGAAATGCCTGGTCCTGAGGGTGTATTCTCTTTGCCTGAAGAAGGTGATGATAGTGTTCC CATTGAGACTGATGAGATTTTGTACAACGATGACACCCAGAAACTTCCTGCTATCATTGA TTCTTTCTGGGAACAGTTCCTGGTGGCTAGCCCTCTATCTGTTGATAATGATGAAGTCGA TTCAGGTGTACTAGACCAAAAGGAAACACAACAGGGGAATGGATGGACCAAAGCTGAAAA CATGGCTAACCTTACAGAACAGATGGGCCTCCTGTCATCACACCATACAGGATGATGAGG TACAATAGGACATACTTAGCCACCATTTGTCAAGGTACCCTGGGATCTCGGTAATAAACT CCCACATCATCACCT