Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0854400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35986017:35986872:-1 gene:Os03g0854400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os03t0854400-01)
Sequence

ATGGGCATGGCTCACGTCCTCAGCCTCCTCGTCGTCATCCTCGTCGCAATCCCCTCTTCT
CGCTCGCACGCCTTGCCGTCCTCCTCATCCCCCTTCGACGCCGCGCTCGCCACGCTCCAG
AACCAGATCGCCTACCGCTTCCATGCCCCGGACCTCCTGCGCCGCGCCATGACGCACGCC
TCCTACTCCCGCGAGAACGGACGCGCGCTCGCCGTCCTCGGCCTCGCCGCCTCGCAGTCC
GCCGCCGCGCTCCGCGCCCTCGCGGCCGACCACGACGCCTCCGCCTCCGCCGTCTCCCGC
CGCGCCCGCGACGCGTCCGGGGAGGCCGCCTGCGTCGCGGCCGCGGCCCGCGTCGGCATC
CCCTCGATCGTGCGCGTCGCCGCCGGGACCAAACCGACCGCCCCACCCGTCGTTTGCGGC
GCCCTCCGCGCCCTCATCGGCGCCGTCGCCGTCGACGCCAACAGCACCCACGCCGCCGAG
GAGGTCTTCTGGAAGCTGCACGTGCTCACCGCCGCATCAGCCAAAGCCGCAATGTGA

Peptide Sequence

PEP ID

Os03t0854400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35986017:35986872:-1 gene:Os03g0854400 transcript:Os03t0854400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os03t0854400-01)
Sequence

MGMAHVLSLLVVILVAIPSSRSHALPSSSSPFDAALATLQNQIAYRFHAPDLLRRAMTHA
SYSRENGRALAVLGLAASQSAAALRALAADHDASASAVSRRARDASGEAACVAAAARVGI
PSIVRVAAGTKPTAPPVVCGALRALIGAVAVDANSTHAAEEVFWKLHVLTAASAKAAM

Transcript Sequence

Transcript ID

Os03t0854400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35986017:35986872:-1 gene:Os03g0854400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease III domain containing protein. (Os03t0854400-01)
Sequence

CTCTTCTTCACTTTACCAATTTCCTTGGGATCAATCAAGGGTCAGTGAGCAGATAGATGG
GCATGGCTCACGTCCTCAGCCTCCTCGTCGTCATCCTCGTCGCAATCCCCTCTTCTCGCT
CGCACGCCTTGCCGTCCTCCTCATCCCCCTTCGACGCCGCGCTCGCCACGCTCCAGAACC
AGATCGCCTACCGCTTCCATGCCCCGGACCTCCTGCGCCGCGCCATGACGCACGCCTCCT
ACTCCCGCGAGAACGGACGCGCGCTCGCCGTCCTCGGCCTCGCCGCCTCGCAGTCCGCCG
CCGCGCTCCGCGCCCTCGCGGCCGACCACGACGCCTCCGCCTCCGCCGTCTCCCGCCGCG
CCCGCGACGCGTCCGGGGAGGCCGCCTGCGTCGCGGCCGCGGCCCGCGTCGGCATCCCCT
CGATCGTGCGCGTCGCCGCCGGGACCAAACCGACCGCCCCACCCGTCGTTTGCGGCGCCC
TCCGCGCCCTCATCGGCGCCGTCGCCGTCGACGCCAACAGCACCCACGCCGCCGAGGAGG
TCTTCTGGAAGCTGCACGTGCTCACCGCCGCATCAGCCAAAGCCGCAATGTGATTCACAA
ATCAGACTGATCGTTAATTTAAATTAGTGCTAATGCTGCTGCCTGCTGCAATATCATCAC
ACTAGATCGTTAAATGTACTCCTACTACTTAGTACTATCAACTAGTAGTATGAACTGTAT
CAGTTGCTTCTAATTTCCAGTTTGAACTGGAGTATATTAGATTATGTAAGTTGGTATTAT
GCATCCTAATATCCAGTCCACGAATGTGCATCTGCTTACATACTCGAGTTATTATCTGGA
ATATATGAGATGAATC