Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0854200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35979829:35982390:-1 gene:Os03g0854200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RRP46 description:Exoribonuclease domain containing protein. (Os03t0854200-01)
Sequence

ATGGAGGAGAGCCGCGCGGACGGGCGGAACCCGAACCAGCTCCGCCCCTTCTCCTGCACA
CGCAACCCTCTCGACCGCGCCCATGGCTCCGCGCGGTGGGCTCAGGGGGACACCATCGTG
CTCGCCGCCGTGTACGGGCCAAAGCCGGGAACCAGGAAGGGGGAGAATCCCGAGAAGGCA
TCCATTGAGGTCGTCTGGAAGCCCATGACCGGCCAGATTGGGAAGCAAGAGAAGGAGTAT
GAGATGACGCTCAAGAGGACATTGCAGAGCATTTGCCTGCTCACTGTTCATCCAAACACC
ACCACCTCTGTCATTCTTCAGGTTGTGGGCAATGATGGTTCTCTTCTTCCATGTGCAATT
AATGCTTGCTGCGCAGCCCTTGTTTTTGCTGGCATCCCCTTGAAACATCTTGCAGTTGCA
ATTGGTTGTGGAGTACTGGAGGATGGTGAAGTGATTTTGGACACAAACAAAGCAGAAGAG
CAGCAATTGAAATCATTTGCTCATTTGGTGTTCCCCAATTCACGCAAGTCTGCTAGTTCA
AAAGAACCAAACCAGAAAGAGGAGGATTCTGAGAGAGGATTGATAACTTCCATTACCCAT
GGAGTGATGTCCGAGGAAGATTATTTCAGCTGCATAGAGAGGGGCCTTGCTGCATCGTCA
CGGATCTCGGATTTTATGAGGACAACATTGCAGAAGCAGGCACCTGGAGATGTCTGA

Peptide Sequence

PEP ID

Os03t0854200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35979829:35982390:-1 gene:Os03g0854200 transcript:Os03t0854200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RRP46 description:Exoribonuclease domain containing protein. (Os03t0854200-01)
Sequence

MEESRADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPKPGTRKGENPEKA
SIEVVWKPMTGQIGKQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGNDGSLLPCAI
NACCAALVFAGIPLKHLAVAIGCGVLEDGEVILDTNKAEEQQLKSFAHLVFPNSRKSASS
KEPNQKEEDSERGLITSITHGVMSEEDYFSCIERGLAASSRISDFMRTTLQKQAPGDV

Transcript Sequence

Transcript ID

Os03t0854200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35979829:35982390:-1 gene:Os03g0854200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RRP46 description:Exoribonuclease domain containing protein. (Os03t0854200-01)
Sequence

GGGTTTCTGGAGTTCGACGACCGCCGCCGCCGTCACGCTGGTTCCCATCGCCGAAGGAGA
GAGGATGGAGGAGAGCCGCGCGGACGGGCGGAACCCGAACCAGCTCCGCCCCTTCTCCTG
CACACGCAACCCTCTCGACCGCGCCCATGGCTCCGCGCGGTGGGCTCAGGGGGACACCAT
CGTGCTCGCCGCCGTGTACGGGCCAAAGCCGGGAACCAGGAAGGGGGAGAATCCCGAGAA
GGCATCCATTGAGGTCGTCTGGAAGCCCATGACCGGCCAGATTGGGAAGCAAGAGAAGGA
GTATGAGATGACGCTCAAGAGGACATTGCAGAGCATTTGCCTGCTCACTGTTCATCCAAA
CACCACCACCTCTGTCATTCTTCAGGTTGTGGGCAATGATGGTTCTCTTCTTCCATGTGC
AATTAATGCTTGCTGCGCAGCCCTTGTTTTTGCTGGCATCCCCTTGAAACATCTTGCAGT
TGCAATTGGTTGTGGAGTACTGGAGGATGGTGAAGTGATTTTGGACACAAACAAAGCAGA
AGAGCAGCAATTGAAATCATTTGCTCATTTGGTGTTCCCCAATTCACGCAAGTCTGCTAG
TTCAAAAGAACCAAACCAGAAAGAGGAGGATTCTGAGAGAGGATTGATAACTTCCATTAC
CCATGGAGTGATGTCCGAGGAAGATTATTTCAGCTGCATAGAGAGGGGCCTTGCTGCATC
GTCACGGATCTCGGATTTTATGAGGACAACATTGCAGAAGCAGGCACCTGGAGATGTCTG
AGAGGAGGCAATCATGCGATAGAAAACGCCTCAACATTGCAGAAGCACAAGGTTGTAGCA
GCTCATGTTTTGAATATGAAACGCGTGGGGACTCTTGGTGCATTATTGATGTTTGAAATT
GGCTCATAGATGTGCATGGATGGTGGAGCGATCCGGCAGGAAATATGTAGCGCCTTGTTC
GCATTTTTTGTGAATGTTGAGCTGCTTTGGTAGTGACTAGTGAGTTCGTTTGTAGTACTA
GTAGCGAGGGAACTGTCGTTTGTTTAGATGAGCAAGGAAGAAATGCCTTTTTGTAACTCA
GGAAGAAGTCAAAGCAGTTGTGTAACAAACCACTTTGCCATGTTGCTGCACATTTTTGGT
CGCCCTG