Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0852900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:35908721:35911694:-1 gene:Os03g0852900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit). (Os03t0852900-01)
Sequence	ATGGCGTCGTCCGTCGCCGCCGCCGCCGCACCGACCGCCGGGGGGCCGCCGGGGAAGCGG CAGGCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGCTGGGCGCCGGCAAC GAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCGTCCTCTTCGATTGC GGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCGATGAGATCGATCCC TCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATGCTGCCTCTCTTCCC TACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCCATGCCACAAAGGCC ATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTTCTGTGGAGGATATG CTGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGGTCATAGACTTCCAC CAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTGGCCATGTACTTGGC GCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACACTGGTGACTACTCC CGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAGTTCTCCCCTGATATTTGC ATTATCGAGTCAACTTATGGCGTGCAGCAGCACCAACCCCGCCATGTACGAGAGAAGCGC TTCACTGATGTAATACACACGACCGTCTCGCAGGGTGGTCGCGTTCTTATCCCAGCCTTT GCTCTTGGAAGAGCTCAAGAGCTGCTACTTATCCTGGATGAGTATTGGGCCAACCACCCA GAGCTCCATAAGATTCCAATCTATTATGCCTCCCCTCTTGCCAAGAAATGCATGGCTGTC TACCAGACATACATCAACTCCATGAATGAAAGGATTAGGAACCAGTTTGCACAATCTAAT CCCTTCCATTTCAAGCATATTGAGTCTTTGAATAGCATAGATAACTTTCATGATGTGGGT CCATCAGTGGTTATGGCAAGCCCAGGTGGTCTCCAGAGTGGCCTCTCCAGGCAGCTCTTT GACAAATGGTGCACAGATAAGAAGAATTCATGTGTTATTCCAGGTTATGTTGTGGAAGGC ACCCTTGCAAAGACCATTATTAACGAGCCAAGAGAAGTGACACTGGCGAATGGGCTCACT GCTCCTCTTCATATGCAGGTCCACTATATTTCCTTTTCTGCTCATGCTGATTTCCCTCAG ACAAGCACCTTCTTGGATGAGCTCCAGCCACCCAACATTGTTCTTGTACACGGGGAAGCA AATGAGATGTCAAGACTTAAGCAGAAGCTTATTTCTCAGTTTGATGGGACAAATATAAAA GTTGTTAACCCCAAGAATTGCCAATCAGTGGAGATGTATTTCAGTTCTGAGAAAATGGCC AAGACAATTGGCAGGTTGGCTGAAAAGGTACCGGAAGCTGGAGAATCAGTTAATGGCTTG CTTGTAAAGAAGGGATTCACATATCAAATTATGGCTCCTGAGGATCTCCGTGTGTACACG CAGCTATCTACAGCTAACATTACCCAAAGGATTGCCGTCCCATATTCTGGTTCTTTTGAA GTCATAAAGTACAGACTGAAGCAAATATATGAGAGCGTGGAGTCATCAACAGAGGAGTCT GATGTTCCAACATTGATTGTGCATGAGAGAGTGACCATTCGCCTGGAATCAGAAAGCTAT GTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTGGTCGCC ATGGTCTTGAACATAGGCCGTGAAGGTCCCAAAGTTGTCCCAGTTGAAGAAGCAGTGAAG ACACAGGAAGAGACGGAAAGGGTGGCCCAGAAGGTAGTTTATGCTCTTATGGTGTCACTT TTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGACAAGTA GCACACTTGGATGGGAGGAGTGGTGGTGTTGAATGTGAAAATGCTACACTGAGAGAAAGG ATCAAGACTGCATTCCGTCGTATACAGGGTGCTGTGAGACCAATCCCGCTTATATCTTCT TGA

Peptide Sequence

PEP ID	Os03t0852900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:35908721:35911694:-1 gene:Os03g0852900 transcript:Os03t0852900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit). (Os03t0852900-01)
Sequence	MASSVAAAAAPTAGGPPGKRQASGGREGDQLIITPLGAGNEVGRSCVYMSFKGRTVLFDC GIHPAYSGMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKA IYRLLLSDYVKVSKVSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLG AAMFMVDIAGVRVLYTGDYSREEDRHLKAAELPQFSPDICIIESTYGVQQHQPRHVREKR FTDVIHTTVSQGGRVLIPAFALGRAQELLLILDEYWANHPELHKIPIYYASPLAKKCMAV YQTYINSMNERIRNQFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLSRQLF DKWCTDKKNSCVIPGYVVEGTLAKTIINEPREVTLANGLTAPLHMQVHYISFSAHADFPQ TSTFLDELQPPNIVLVHGEANEMSRLKQKLISQFDGTNIKVVNPKNCQSVEMYFSSEKMA KTIGRLAEKVPEAGESVNGLLVKKGFTYQIMAPEDLRVYTQLSTANITQRIAVPYSGSFE VIKYRLKQIYESVESSTEESDVPTLIVHERVTIRLESESYVTLQWSSDPISDMVSDSVVA MVLNIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAEEGKLVISVDGQV AHLDGRSGGVECENATLRERIKTAFRRIQGAVRPIPLISS

Transcript Sequence

Transcript ID	Os03t0852900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35908721:35911694:-1 gene:Os03g0852900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit). (Os03t0852900-01)
Sequence	AAGTGAAGGGGAAAATGGCGTCGTCCGTCGCCGCCGCCGCCGCACCGACCGCCGGGGGGC CGCCGGGGAAGCGGCAGGCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGC TGGGCGCCGGCAACGAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCG TCCTCTTCGATTGCGGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCG ATGAGATCGATCCCTCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATG CTGCCTCTCTTCCCTACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCC ATGCCACAAAGGCCATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTT CTGTGGAGGATATGCTGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGG TCATAGACTTCCACCAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTG GCCATGTACTTGGCGCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACA CTGGTGACTACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAGTTCT CCCCTGATATTTGCATTATCGAGTCAACTTATGGCGTGCAGCAGCACCAACCCCGCCATG TACGAGAGAAGCGCTTCACTGATGTAATACACACGACCGTCTCGCAGGGTGGTCGCGTTC TTATCCCAGCCTTTGCTCTTGGAAGAGCTCAAGAGCTGCTACTTATCCTGGATGAGTATT GGGCCAACCACCCAGAGCTCCATAAGATTCCAATCTATTATGCCTCCCCTCTTGCCAAGA AATGCATGGCTGTCTACCAGACATACATCAACTCCATGAATGAAAGGATTAGGAACCAGT TTGCACAATCTAATCCCTTCCATTTCAAGCATATTGAGTCTTTGAATAGCATAGATAACT TTCATGATGTGGGTCCATCAGTGGTTATGGCAAGCCCAGGTGGTCTCCAGAGTGGCCTCT CCAGGCAGCTCTTTGACAAATGGTGCACAGATAAGAAGAATTCATGTGTTATTCCAGGTT ATGTTGTGGAAGGCACCCTTGCAAAGACCATTATTAACGAGCCAAGAGAAGTGACACTGG CGAATGGGCTCACTGCTCCTCTTCATATGCAGGTCCACTATATTTCCTTTTCTGCTCATG CTGATTTCCCTCAGACAAGCACCTTCTTGGATGAGCTCCAGCCACCCAACATTGTTCTTG TACACGGGGAAGCAAATGAGATGTCAAGACTTAAGCAGAAGCTTATTTCTCAGTTTGATG GGACAAATATAAAAGTTGTTAACCCCAAGAATTGCCAATCAGTGGAGATGTATTTCAGTT CTGAGAAAATGGCCAAGACAATTGGCAGGTTGGCTGAAAAGGTACCGGAAGCTGGAGAAT CAGTTAATGGCTTGCTTGTAAAGAAGGGATTCACATATCAAATTATGGCTCCTGAGGATC TCCGTGTGTACACGCAGCTATCTACAGCTAACATTACCCAAAGGATTGCCGTCCCATATT CTGGTTCTTTTGAAGTCATAAAGTACAGACTGAAGCAAATATATGAGAGCGTGGAGTCAT CAACAGAGGAGTCTGATGTTCCAACATTGATTGTGCATGAGAGAGTGACCATTCGCCTGG AATCAGAAAGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTG ATTCTGTGGTCGCCATGGTCTTGAACATAGGCCGTGAAGGTCCCAAAGTTGTCCCAGTTG AAGAAGCAGTGAAGACACAGGAAGAGACGGAAAGGGTGGCCCAGAAGGTAGTTTATGCTC TTATGGTGTCACTTTTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTG TGGATGGACAAGTAGCACACTTGGATGGGAGGAGTGGTGGTGTTGAATGTGAAAATGCTA CACTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACAGGGTGCTGTGAGACCAATCC CGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTCC TAGATGAACTTAGTAGCATTACCTGTCTGCACATGATGAGCAGGCATTTTCATCCTGCTT CAAATGCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATCTTAGTG CCGTTGAAATAAACTCCAGCTGTAACATTTTGATTTTGTAGCCATTTCTAACTGTTACTC ATTTCCTGTGAAATTGTTCTTAGCTTCTC