Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0852700-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:35900827:35903007:-1 gene:Os03g0852700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0852700-01);Pentatricopeptide repeat domain containing protein. (Os03t0852700-02)
Sequence	ACGACCTGCGCCATCCAGCGGCGGCGCCGCTCCACCGCGCCAGCTCGCCGACGAGGCCCA CCTTCTCGCCGCCATCCCCACTCCGGCGCGGCCCTCACCCTCCGCGCCGCGCCGCCGCCG GCCACCCAGCCCACCCTGGACCGCGTCCTCTCCGACCTCGGGTCCCACCCGCGCCTCCTC ACCCCCGACCTCCTCGACTCCCTCCTCGCCGCCCTCCCGCTCCACCCCTCCCCGCGCCGC AACCTCGCCCGCCTCCGCCGCCTCCTCTCCGTCTCCCTCCTCCGCCGCTACCCCGCGCTC GCCCGCCGCCTCCTCCACCTCCACGCCTCTCTGGGCCTCGTCTCCTACGCCCACCACCTG TTCGACCACCTGCTGCCCGCGCGCGCCCGGGAGGACGCCTTCCCGTGGAACTGCCTCATC GCCGGGTACGCGCGCCTCGGCCGCCACGAGGACGCGCTCGCGCTCTACCTCCAGATGGAG GAGGAGACCGTCCCGCGGGACCGCTTCACCTTCACGAGCGCGCTCCAGGCCTGCGCCGGC GTCGGCTCGGTCGAGCTCGGCCATGCCATCCACCGTGACGTCGTGCGCGCCGGTCTCGCG TCCGACGTGCCTGTGTGCGACGCCCTCGTGGATTTGTACGCCACATTCGGCGACGTACGG AGGGCTCTCCAGGTGTTCGATGCAATGCCGGACAGGGACGGCGTCTCATGGAACATCATG CTTGCTGGGTGCCTGCGACATGGGCTCTCCCAGCAGGCTCTGGAGCTCTGGAGAAGAATG CTGAGAGAAGAACATGAGCCCGACTCCATTACATTATCAACAATGCTGTCGATACTGCCG TTGGTTTGTGACAATGGTAAATGGGGACTGGAGATTCATGCCTGGGCAATTCGTCATGGT CTCGAGACAGAGCTGTCAGTAGCAAATGCTCTGATCAGGATGTACTCTGATAAGAACGAA CAGAGCCATGCCCTGTTGGTGTTTGAGTCAATGACGATGAGGGATCTGCAGTCCTGGAAT GCTATAATCTCTGCTCACCTCCAGGACTACAGAATTCTCATGATCTTCCGTCGAATGGTG GATTCCGGGATGCGACCAGATGAGACCACCTTTGCGTTGGTGTTCTCAGCTTGTGACAAT TTAGGGCTGGTGGAGGGTGGCATGAGATTGTTCTCTGAGATGGAGAATGAGTACAGAATT CCCCCTACTATGGAACAATATACCTGCATGGTGAACATGCTAGGCAAGGCTGGGATGATC CATGAGGCTTACGAGTTCATGTCGAAGCGGAAGCCTCTCGACAATGAACAGACTGTTTTG AGGGCTCTACTGCAGGCTTGCTTGATGCATCGCAACGCCAGGGTTGGAGAGATCATTGCG AAGAGGTTGATCGAACTGGAGCCTGACAATGAGCACAATTTTGTAAAGTTGATGGAGATC TATCAAAATGTGGGAAGGTTGGTAGAGGCTGAAAAGGTGAAGAAGACGATGAGGGATAGA GGACTGTCATGTCAAAGCTGA

Peptide Sequence

PEP ID	Os03t0852700-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:35900827:35903007:-1 gene:Os03g0852700 transcript:Os03t0852700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0852700-01);Pentatricopeptide repeat domain containing protein. (Os03t0852700-02)
Sequence	TTCAIQRRRRSTAPARRRGPPSRRHPHSGAALTLRAAPPPATQPTLDRVLSDLGSHPRLL TPDLLDSLLAALPLHPSPRRNLARLRRLLSVSLLRRYPALARRLLHLHASLGLVSYAHHL FDHLLPARAREDAFPWNCLIAGYARLGRHEDALALYLQMEEETVPRDRFTFTSALQACAG VGSVELGHAIHRDVVRAGLASDVPVCDALVDLYATFGDVRRALQVFDAMPDRDGVSWNIM LAGCLRHGLSQQALELWRRMLREEHEPDSITLSTMLSILPLVCDNGKWGLEIHAWAIRHG LETELSVANALIRMYSDKNEQSHALLVFESMTMRDLQSWNAIISAHLQDYRILMIFRRMV DSGMRPDETTFALVFSACDNLGLVEGGMRLFSEMENEYRIPPTMEQYTCMVNMLGKAGMI HEAYEFMSKRKPLDNEQTVLRALLQACLMHRNARVGEIIAKRLIELEPDNEHNFVKLMEI YQNVGRLVEAEKVKKTMRDRGLSCQS

Transcript Sequence

Transcript ID	Os03t0852700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35900827:35903007:-1 gene:Os03g0852700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0852700-01);Pentatricopeptide repeat domain containing protein. (Os03t0852700-02)
Sequence	ACGACCTGCGCCATCCAGCGGCGGCGCCGCTCCACCGCGCCAGCTCGCCGACGAGGCCCA CCTTCTCGCCGCCATCCCCACTCCGGCGCGGCCCTCACCCTCCGCGCCGCGCCGCCGCCG GCCACCCAGCCCACCCTGGACCGCGTCCTCTCCGACCTCGGGTCCCACCCGCGCCTCCTC ACCCCCGACCTCCTCGACTCCCTCCTCGCCGCCCTCCCGCTCCACCCCTCCCCGCGCCGC AACCTCGCCCGCCTCCGCCGCCTCCTCTCCGTCTCCCTCCTCCGCCGCTACCCCGCGCTC GCCCGCCGCCTCCTCCACCTCCACGCCTCTCTGGGCCTCGTCTCCTACGCCCACCACCTG TTCGACCACCTGCTGCCCGCGCGCGCCCGGGAGGACGCCTTCCCGTGGAACTGCCTCATC GCCGGGTACGCGCGCCTCGGCCGCCACGAGGACGCGCTCGCGCTCTACCTCCAGATGGAG GAGGAGACCGTCCCGCGGGACCGCTTCACCTTCACGAGCGCGCTCCAGGCCTGCGCCGGC GTCGGCTCGGTCGAGCTCGGCCATGCCATCCACCGTGACGTCGTGCGCGCCGGTCTCGCG TCCGACGTGCCTGTGTGCGACGCCCTCGTGGATTTGTACGCCACATTCGGCGACGTACGG AGGGCTCTCCAGGTGTTCGATGCAATGCCGGACAGGGACGGCGTCTCATGGAACATCATG CTTGCTGGGTGCCTGCGACATGGGCTCTCCCAGCAGGCTCTGGAGCTCTGGAGAAGAATG CTGAGAGAAGAACATGAGCCCGACTCCATTACATTATCAACAATGCTGTCGATACTGCCG TTGGTTTGTGACAATGGTAAATGGGGACTGGAGATTCATGCCTGGGCAATTCGTCATGGT CTCGAGACAGAGCTGTCAGTAGCAAATGCTCTGATCAGGATGTACTCTGATAAGAACGAA CAGAGCCATGCCCTGTTGGTGTTTGAGTCAATGACGATGAGGGATCTGCAGTCCTGGAAT GCTATAATCTCTGCTCACCTCCAGGACTACAGAATTCTCATGATCTTCCGTCGAATGGTG GATTCCGGGATGCGACCAGATGAGACCACCTTTGCGTTGGTGTTCTCAGCTTGTGACAAT TTAGGGCTGGTGGAGGGTGGCATGAGATTGTTCTCTGAGATGGAGAATGAGTACAGAATT CCCCCTACTATGGAACAATATACCTGCATGGTGAACATGCTAGGCAAGGCTGGGATGATC CATGAGGCTTACGAGTTCATGTCGAAGCGGAAGCCTCTCGACAATGAACAGACTGTTTTG AGGGCTCTACTGCAGGCTTGCTTGATGCATCGCAACGCCAGGGTTGGAGAGATCATTGCG AAGAGGTTGATCGAACTGGAGCCTGACAATGAGCACAATTTTGTAAAGTTGATGGAGATC TATCAAAATGTGGGAAGGTTGGTAGAGGCTGAAAAGGTGAAGAAGACGATGAGGGATAGA GGACTGTCATGTCAAAGCTGATGAATTCAAATGATCATAGTAGCTTTTGAACCATATTTC AGAGCTCTTTTGTTTAGTGGTGGTGAACATAGAACTAACCCCAGTTCATTGTCAAACGGT TGTACTTTGTACAGGCCAGTATCAGGTGCAAAAACAATTCTTTAATTAATGCTGTACAAT GGAGTATTGTGTATACAACAATTGTAAGGTACAATATTGTATATACAACAATTTTAAGAT ACAACTACTCTTCTTTGATCCATGGCTCCAACTTTTGGACAGAAAAAGTTATGCGGCTCC CCCGGGAGTGACTAAACAATTGAAATTGCTACATCAAAATATCATTGGCATGCAAAAGAA CAAAATTTTAAAACCTGGAGCAGAAGTTCACCAAAGACTAAATATATTGATATCAATGTT GAATGGATTACAGGATTCAAGAAATTCATCCACTTCATACTTAAAAGAATCCAGGAACAA TCCAAGTGTAAGGCCAGCTTTCCAGTAATTGAATATGGTAATCATCTTCCTTATCCTACC AAGAAACGCAAACGAAGCCCTATACATCAGAGCCCCGATACCCTCCACAATGGCAACAGC AAGTCCAGCAGACAATATGTCCCAGTCACCTGTTTGCCCGATGACAGTAGCAAATGCCGT AGCACAATAAAATCCGATGAG