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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0852500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35897331:35899388:-1 gene:Os03g0852500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NIR3. (Os03t0852500-01)
Sequence

ATGCAGTTCCTCCGAGGAGGCGGCGGCGGTAGCGGTGGCGGCGGAGCTGGAGGGATGGCG
TGGGAGGTGCTGAAGAGGCACTTCTCGCGGAAGCGGGCGGTGGACGTGCGGCGGATCAAC
CCCAAGGTGCCCAAGGAGGAGGCCGTCGCCATCTCCGGTCGCCTCCTCCAGATCTTCACC
GACCATGGCCCCCTCACCGTCGGCAACACATGGAACCACGCCAAGGATGCTGGTATCAGT
GGCCTGAATAGCAAGACTCACATGAAGATCCTGCTGAAATGGATGACGGGGAGAAGGATC
GTGAAGCTGAACTGCGTTGGCACGGGCAACTCAAAGAAGTTCCTGTATTCCCCGTATTCT
GCAGATGCAGATAAATCCGAAGAAGCAGCAGCAGAAGAGCTGAGTAAGGCTGCTGCTTCA
CAAGGGGGAAAAGCTACAAAAGGGCAACAGAAGAAACGTGCCACAGCCCTACACTGA

Peptide Sequence

PEP ID

Os03t0852500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35897331:35899388:-1 gene:Os03g0852500 transcript:Os03t0852500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NIR3. (Os03t0852500-01)
Sequence

MQFLRGGGGGSGGGGAGGMAWEVLKRHFSRKRAVDVRRINPKVPKEEAVAISGRLLQIFT
DHGPLTVGNTWNHAKDAGISGLNSKTHMKILLKWMTGRRIVKLNCVGTGNSKKFLYSPYS
ADADKSEEAAAEELSKAAASQGGKATKGQQKKRATALH

Transcript Sequence

Transcript ID

Os03t0852500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35897331:35899388:-1 gene:Os03g0852500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NIR3. (Os03t0852500-01)
Sequence

GCTGAACTGAACCCCAGCCAGCGAACCAAGGCGGCGGCGGCGGCGGCGGCGACATGCAGT
TCCTCCGAGGAGGCGGCGGCGGTAGCGGTGGCGGCGGAGCTGGAGGGATGGCGTGGGAGG
TGCTGAAGAGGCACTTCTCGCGGAAGCGGGCGGTGGACGTGCGGCGGATCAACCCCAAGG
TGCCCAAGGAGGAGGCCGTCGCCATCTCCGGTCGCCTCCTCCAGATCTTCACCGACCATG
GCCCCCTCACCGTCGGCAACACATGGAACCACGCCAAGGATGCTGGTATCAGTGGCCTGA
ATAGCAAGACTCACATGAAGATCCTGCTGAAATGGATGACGGGGAGAAGGATCGTGAAGC
TGAACTGCGTTGGCACGGGCAACTCAAAGAAGTTCCTGTATTCCCCGTATTCTGCAGATG
CAGATAAATCCGAAGAAGCAGCAGCAGAAGAGCTGAGTAAGGCTGCTGCTTCACAAGGGG
GAAAAGCTACAAAAGGGCAACAGAAGAAACGTGCCACAGCCCTACACTGATTGTCGCTCA
TCACAATCTTATTGTTACGCTTCTGGGATTATTTTTGTTTTTAATCTTAGTGGTTAGGCA
GGGCGAAATTCTGTTAAGATGATTCCATCCAAAACTGTGATGAACCTTTCTCATTGATGA
TGCAGTTATGCTGGCAGGCCAGCATTTTGTTGTAGTAGCACTGTCTGTATGTTCGCTAAG
GAGCAGCAATAATTTGATGATGCTTCTATAGTTTGAGCTACGGCTAATAAGCCCTAGAAG
ATATGAAGCAACTAAGTTATATTTATGTGTAAAACTTTTATACATGTG