Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0852300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35890202:35894172:1 gene:Os03g0852300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA POLYMERASE II SUBUNIT B3-2 description:Histone-fold domain containing protein. (Os03t0852300-01)
Sequence

ATGGCCGGGAAGAAGAAGGCCCTAACAAATCCCGCCTCTCCCTCCGCCTCCGCCTCCGCT
TCCACCCCTAAGAAATCCACCGCCACCTCCAAGGACCGCTCCACGCCGAAACCCCGCAAA
AACCCCAACCCCAAGGAGGAGGCACCACCGCCGCCGCCCGCCAACAACAAGCGCCTCAAC
CCCCAAGGGGGATCCAACCGTAAGAAGAAGGCCGATGCGGGGACGCCCTCCAAGAAGCCG
AAGCGCCAGCCGCCGGAGCCCAAACCTCGGAAGCACAAGGGGGCCAAGAGCGAGAAGCCG
CACCGGGTTTCCGGCGAAGGGGAGAAGCCCACGCCCACGAAGAAGAAGAAGAAGAAGGAG
AGCAGCAAGGAGCCCAAGCGCGAGAAGCAGCAAGCGTCCGCGCCTATGTCGACTCCCTCG
AAGAAGAACAAGGAAGCCAAACGCGACACAGGAGGAGCGGGGAAGCCCACGCCCACCAAG
AGGAAGCTCGGCGACGTGGATCCCCCACAGGAGCGACCGTCCGGTGAAGGCCAGGCAAGC
TCTCCCACGCCCGCCAAGAAGCGGAAGGACAAGGCGGCGGCGGCGGAGGCGGTTGCCGAC
CACGGCGCCGGCAGCTTCCCGATGGCTCGGGTGCGGCAGATAATGCGGGCCGAGGACGCC
ACCATCCGCCCCTCCAATGAGGCTGTCTTCCTCATCAACAAGGCCACCGAGATATTCTTG
AAGAGGTTTGCAGACGATGCTTATCGAAATGCTTTGAAGGATCGGAAGAAGTCAATTGTG
TATGATAACCTTTCAACAGCAGTGTGCAACCAGAAAAGATACAAGTTTCTCTCAGATTTT
GTTCCACAGAAAGTTACAGCTGAAGATGCTTTGAAGGCTCCAGTTAGCAGCCAAGTGAAC
CAACCACAATAA

Peptide Sequence

PEP ID

Os03t0852300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35890202:35894172:1 gene:Os03g0852300 transcript:Os03t0852300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA POLYMERASE II SUBUNIT B3-2 description:Histone-fold domain containing protein. (Os03t0852300-01)
Sequence

MAGKKKALTNPASPSASASASTPKKSTATSKDRSTPKPRKNPNPKEEAPPPPPANNKRLN
PQGGSNRKKKADAGTPSKKPKRQPPEPKPRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKE
SSKEPKREKQQASAPMSTPSKKNKEAKRDTGGAGKPTPTKRKLGDVDPPQERPSGEGQAS
SPTPAKKRKDKAAAAEAVADHGAGSFPMARVRQIMRAEDATIRPSNEAVFLINKATEIFL
KRFADDAYRNALKDRKKSIVYDNLSTAVCNQKRYKFLSDFVPQKVTAEDALKAPVSSQVN
QPQ

Transcript Sequence

Transcript ID

Os03t0852300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35890202:35894172:1 gene:Os03g0852300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA POLYMERASE II SUBUNIT B3-2 description:Histone-fold domain containing protein. (Os03t0852300-01)
Sequence

TTGAGTTTCAGCATCAGCGCCCCCAAACCAAATAATTTTGAACTCTCCGGACTCCGGCCG
CCGCCTTCCAGAGGAACCTCGCGGCTGCCGGTGCCGGTGCCGGAGAAGACATGGCCGGGA
AGAAGAAGGCCCTAACAAATCCCGCCTCTCCCTCCGCCTCCGCCTCCGCTTCCACCCCTA
AGAAATCCACCGCCACCTCCAAGGACCGCTCCACGCCGAAACCCCGCAAAAACCCCAACC
CCAAGGAGGAGGCACCACCGCCGCCGCCCGCCAACAACAAGCGCCTCAACCCCCAAGGGG
GATCCAACCGTAAGAAGAAGGCCGATGCGGGGACGCCCTCCAAGAAGCCGAAGCGCCAGC
CGCCGGAGCCCAAACCTCGGAAGCACAAGGGGGCCAAGAGCGAGAAGCCGCACCGGGTTT
CCGGCGAAGGGGAGAAGCCCACGCCCACGAAGAAGAAGAAGAAGAAGGAGAGCAGCAAGG
AGCCCAAGCGCGAGAAGCAGCAAGCGTCCGCGCCTATGTCGACTCCCTCGAAGAAGAACA
AGGAAGCCAAACGCGACACAGGAGGAGCGGGGAAGCCCACGCCCACCAAGAGGAAGCTCG
GCGACGTGGATCCCCCACAGGAGCGACCGTCCGGTGAAGGCCAGGCAAGCTCTCCCACGC
CCGCCAAGAAGCGGAAGGACAAGGCGGCGGCGGCGGAGGCGGTTGCCGACCACGGCGCCG
GCAGCTTCCCGATGGCTCGGGTGCGGCAGATAATGCGGGCCGAGGACGCCACCATCCGCC
CCTCCAATGAGGCTGTCTTCCTCATCAACAAGGCCACCGAGATATTCTTGAAGAGGTTTG
CAGACGATGCTTATCGAAATGCTTTGAAGGATCGGAAGAAGTCAATTGTGTATGATAACC
TTTCAACAGCAGTGTGCAACCAGAAAAGATACAAGTTTCTCTCAGATTTTGTTCCACAGA
AAGTTACAGCTGAAGATGCTTTGAAGGCTCCAGTTAGCAGCCAAGTGAACCAACCACAAT
AAGTTGCTAGTGCTCCGCGAGGGAGGTCATCCTTTCACGAGTTATCTCCTGGGAGGGTTC
TGCAATTGTAAACGCCAGCTGTGCAGCTCATGTTGCCCTCAGGACTGGCATCTTGCGACA
TGTTCAATATGATTCTGATCAGAATCGGAGGCTTAAAAGAAGATTATAAGGGGAAACCTG
AGTAATCTACATATGAAAGAAGCATGATGAAACTTTTTGTCATGAGAATCACTTGAAATA
TGCTTGCTTAGAGCCTCAAATCAGGATCACCTTTTTGGCTGTGTAAGCTGTGGGTTGTGT
GAGGTGGATGTAGCTTAGGCTAAATGTTACTGTGTATTTTTTTTTAGATAATACGTTACT
AGTAGTATACATTTGTGAGTTCTGACTTGTTCATGTACTAGTTCATTACATATATTTTCG
CAGGTGCATGCTTTACCAATTACTTGCTGGTGC