Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0852000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:35877598:35882905:-1 gene:Os03g0852000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pentatricopeptide (PPR) repeat-containing protein. (Os03t0852000-01);Similar to Hydroxyproline-rich glycoprotein. (Os03t0852000-02)
Sequence	ATGCATTCCCGCCACCAACGCCTCGCGTCGCTGACGAAGTTGCTCACTTCCCACGTCAAC GTCGGCCGTCACCGGGATGCTCTCGCCTTCTTCTCCCGCATGGTCTCCGACCCCTCCCTC CCGCCGCTCTCCGACCCCTCCTTCGCCTACGCCTTCCCGCTCGCCCTCAAGTCCTCCTCC GCCCTCCGCCTCCCCTCCGCCGCCGCCGCCGCCGACTCCCTCCACGCCCTCGCCGCCAAG TGTGGCTTCCTCTCCAGTCCATTCTTCGCCTCCGCGCTCGTCGCCTCCTACGGCGCCTGC GCCTCCCCCGCCCTCGCCCGCCGCCTGTTCGACGAATTGCCCCACCGCAACGCCATCGTC TGTAGCGCCATGATCTCCGTCCACATCCGATCGGGCGACCTCGCCGGGGCGCTGCGTGAG CTCGATCTCATGGATGTGGCGCCGACCGCCTCCTGCTTCAACTCTGTGATCGCCGCGGTT GCTGAGTCCGGGGAACATCCGGCCCGGGCCATCGATCTCTACCGACGGATGCAGAGAATG GGCGTTCTCCCGAGCCTCATTACTCTGCTGGCGCTCGTCCCCTCGTGCACGGCGCTGGGT GCGTTGAGCTCAATCAAGGAGGTTCACGGTTTTGCTACGCGGCACGGCATGTTTGCGAGC TGCCACCTAGGAAGCTCCCTCATTGAAGCATACGGGCGATGTGGTTCTCTGGCTGGCGCA CGGAACGTGTTTGACCAGGTGCAGGAGCGCGATGTGGTTGTCTGGAGCTCTATTGTATCA GCATATGCATTCCATGGCCACGCAGATGTTGCAATGTCGCTTTTCAGGCATATGGAGCTG GACAATGTCCGGCCTGATGGCATAATGTTCCTTGGCGTATTAAAGGCTTGCGGCCATGCT GGTCACGCAGATGATGCATTGAAGTATTTCGATGTTCTAACCAAAATATTTGGGGTCGAG GCCTGTGGAGATCACTATTCATGCTTGGTTGATGTCTTGGGCCGGGCAGGAAGACTACGC CAAGCTTATGATGTTATACAGACAATGCCAGTTAAGGTTACTGCGAAAGCCTGGGGTGCT CTTCTTGCTGCTTGCAGGAAATATGGGGAGGTGGGGTTGGCAGAGGTTGCAGGGAGAGCA TTGTTTGAGATTGAACCGGAGAATGCAGGTAACTTTGTTTCACTTGCGAACATCTATTCA GGCATGGGTATGCATGACAAGGCAGAACAGGTGAGAAGGGAGATGGAGCAGCGAGGTGTG CGGAGATTGCCTGGAAGCAGTTGGATGATACATTGCAAGTCAAGTGAACTGTTCTGA

Peptide Sequence

PEP ID	Os03t0852000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:35877598:35882905:-1 gene:Os03g0852000 transcript:Os03t0852000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pentatricopeptide (PPR) repeat-containing protein. (Os03t0852000-01);Similar to Hydroxyproline-rich glycoprotein. (Os03t0852000-02)
Sequence	MHSRHQRLASLTKLLTSHVNVGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPLALKSSS ALRLPSAAAAADSLHALAAKCGFLSSPFFASALVASYGACASPALARRLFDELPHRNAIV CSAMISVHIRSGDLAGALRELDLMDVAPTASCFNSVIAAVAESGEHPARAIDLYRRMQRM GVLPSLITLLALVPSCTALGALSSIKEVHGFATRHGMFASCHLGSSLIEAYGRCGSLAGA RNVFDQVQERDVVVWSSIVSAYAFHGHADVAMSLFRHMELDNVRPDGIMFLGVLKACGHA GHADDALKYFDVLTKIFGVEACGDHYSCLVDVLGRAGRLRQAYDVIQTMPVKVTAKAWGA LLAACRKYGEVGLAEVAGRALFEIEPENAGNFVSLANIYSGMGMHDKAEQVRREMEQRGV RRLPGSSWMIHCKSSELF

Transcript Sequence

Transcript ID	Os03t0852000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35877598:35882905:-1 gene:Os03g0852000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pentatricopeptide (PPR) repeat-containing protein. (Os03t0852000-01);Similar to Hydroxyproline-rich glycoprotein. (Os03t0852000-02)
Sequence	GTGCATCTTCCCCGTCTTGACTTGCTCCGGTTCAATTCAAATCACCTCGCTCGCCGTCCG TCTTCGTGGAGCTTTCGAATACGAGGCGGCGATCGATGCATTCCCGCCACCAACGCCTCG CGTCGCTGACGAAGTTGCTCACTTCCCACGTCAACGTCGGCCGTCACCGGGATGCTCTCG CCTTCTTCTCCCGCATGGTCTCCGACCCCTCCCTCCCGCCGCTCTCCGACCCCTCCTTCG CCTACGCCTTCCCGCTCGCCCTCAAGTCCTCCTCCGCCCTCCGCCTCCCCTCCGCCGCCG CCGCCGCCGACTCCCTCCACGCCCTCGCCGCCAAGTGTGGCTTCCTCTCCAGTCCATTCT TCGCCTCCGCGCTCGTCGCCTCCTACGGCGCCTGCGCCTCCCCCGCCCTCGCCCGCCGCC TGTTCGACGAATTGCCCCACCGCAACGCCATCGTCTGTAGCGCCATGATCTCCGTCCACA TCCGATCGGGCGACCTCGCCGGGGCGCTGCGTGAGCTCGATCTCATGGATGTGGCGCCGA CCGCCTCCTGCTTCAACTCTGTGATCGCCGCGGTTGCTGAGTCCGGGGAACATCCGGCCC GGGCCATCGATCTCTACCGACGGATGCAGAGAATGGGCGTTCTCCCGAGCCTCATTACTC TGCTGGCGCTCGTCCCCTCGTGCACGGCGCTGGGTGCGTTGAGCTCAATCAAGGAGGTTC ACGGTTTTGCTACGCGGCACGGCATGTTTGCGAGCTGCCACCTAGGAAGCTCCCTCATTG AAGCATACGGGCGATGTGGTTCTCTGGCTGGCGCACGGAACGTGTTTGACCAGGTGCAGG AGCGCGATGTGGTTGTCTGGAGCTCTATTGTATCAGCATATGCATTCCATGGCCACGCAG ATGTTGCAATGTCGCTTTTCAGGCATATGGAGCTGGACAATGTCCGGCCTGATGGCATAA TGTTCCTTGGCGTATTAAAGGCTTGCGGCCATGCTGGTCACGCAGATGATGCATTGAAGT ATTTCGATGTTCTAACCAAAATATTTGGGGTCGAGGCCTGTGGAGATCACTATTCATGCT TGGTTGATGTCTTGGGCCGGGCAGGAAGACTACGCCAAGCTTATGATGTTATACAGACAA TGCCAGTTAAGGTTACTGCGAAAGCCTGGGGTGCTCTTCTTGCTGCTTGCAGGAAATATG GGGAGGTGGGGTTGGCAGAGGTTGCAGGGAGAGCATTGTTTGAGATTGAACCGGAGAATG CAGGTAACTTTGTTTCACTTGCGAACATCTATTCAGGCATGGGTATGCATGACAAGGCAG AACAGGTGAGAAGGGAGATGGAGCAGCGAGGTGTGCGGAGATTGCCTGGAAGCAGTTGGA TGATACATTGCAAGTCAAGTGAACTGTTCTGAAAGGGGAAACACACTTTGAGAACTGCAT CACAGACTCACAAGAAAATTTTATCAAGATATTCAAATCGTTTCGTATCCATGAAAGACA GGCAGTGAGATCAGCATCAAGCACTACCAGCGGGCACCAGCAGATGCATGTGGGCCACAG CACTAGCCAGTACCACGGATGGTTCCGTCTTCCTGGCCGTGCAAGCCAGTCCACTTCTCA TCATCCTCTGTCCGTGCAAGGTGCCCTGGCTGCAAGTATAAATACCCAGTCTCCTTACCT TGCAAGTCTGGGCTCTTAACCAAATGAGCAGGAGCCAACTGATGCATATGTATAAGCTTG GAGATCTGACGCCTGCTCCATCCATGACGATTCCAATGGCACATTCCTCAAGGCCAACTC TGGGTTTTCCCCTAGGGACGGCGCTCCTGATCTTTGTTATCTTCTCCCTCAGTGGCATCT TCTCATGTTGCTACCACTGGGACAAGCTCCGTGCCTTCCTCTGGTCTCGGCATCCTGATG TGATACTCCAAGAAGGCCAGCACACCGTCATCTCCATTGCGTCTCCGAGCAAGACAACAT CTGATCACAAGAACGAGAAAGCAGAGAAAGAGTGTGGTTTGCCCGTTATTATGCCTGGGG ACAGGATCCCCAAATTCTTCGCCAGGCCGTGCCCGCATGAGAAGTGTTTGCCTGCAGCAG AGGAGGAGGAAGCTGAGGTGCAAGTCAAATGTTCTGTTCCACAATCTAGTTAGTAGCTGT AAATGAAGCCATACAGAGTGGGTGTATATAAGCTTTTATTAGAACCTCTAAAAAAAATTC CATTTCCTCTTTGGTCCTATGAAAATATTCAATTTCTTC