Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0851000-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:35822138:35824240:1 gene:Os03g0851000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription factor BTF3b description:Similar to Transcription factor homolog BTF3-like protein. (Os03t0851000-01);Similar to Transcription factor homolog BTF3-like protein. (Os03t0851000-02)
Sequence

ATGAACAAGGAGAGGCTTATGAAGATGGCCGGCGCCGTCCGCACCGGCGGGAAAGGCACC
GTGCGCAGGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAG
AGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAGGTCAACATCTTC
AAGGATGATCTCGTCATCCAGTTCGTCAATCCCAAAGTGCAAGCTTCCATCGCCGCAAAC
ACATGGGTGGTCAGTGGCTCCCCACAGACCAAGAAGCTTCAAGATGTTCTTCCTGGGATC
ATTAACCAATTGGGTCCTGACAACATGGAGCACCTAAAGAGGATTGCTGAAGAGATGCAG
AAGCAGGTAGCTGCTGCAGGTGCCACTGCCCAGGCAAAGGAAGAGAACGATGATGATGTT
CCAGAGCTTGTTCCGGGAGAGAATTTCGAAGAGGTAGCTCAGGAGACAAAAGCCTGA

Peptide Sequence

PEP ID

Os03t0851000-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:35822138:35824240:1 gene:Os03g0851000 transcript:Os03t0851000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription factor BTF3b description:Similar to Transcription factor homolog BTF3-like protein. (Os03t0851000-01);Similar to Transcription factor homolog BTF3-like protein. (Os03t0851000-02)
Sequence

MNKERLMKMAGAVRTGGKGTVRRKKKAVHKTGTTDDKRLQSTLKRVGVNTIPAIEEVNIF
KDDLVIQFVNPKVQASIAANTWVVSGSPQTKKLQDVLPGIINQLGPDNMEHLKRIAEEMQ
KQVAAAGATAQAKEENDDDVPELVPGENFEEVAQETKA

Transcript Sequence

Transcript ID

Os03t0851000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35822138:35824240:1 gene:Os03g0851000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription factor BTF3b description:Similar to Transcription factor homolog BTF3-like protein. (Os03t0851000-01);Similar to Transcription factor homolog BTF3-like protein. (Os03t0851000-02)
Sequence

AACACCTCTCTTCTCCTGCGCCGCCGCCGCCTCCTCCTCCTCCCGCATCTCCCTCCTCGC
CTCTCGCTGCCGGCCGCGCTTCGCCAAGATGAACAAGGAGAGGCTTATGAAGATGGCCGG
CGCCGTCCGCACCGGCGGGAAAGGCACCGTGCGCAGGAAGAAGAAGGCCGTCCACAAGAC
GGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCAT
CCCCGCGATCGAGGAGGTCAACATCTTCAAGGATGATCTCGTCATCCAGTTCGTCAATCC
CAAAGTGCAAGCTTCCATCGCCGCAAACACATGGGTGGTCAGTGGCTCCCCACAGACCAA
GAAGCTTCAAGATGTTCTTCCTGGGATCATTAACCAATTGGGTCCTGACAACATGGAGCA
CCTAAAGAGGATTGCTGAAGAGATGCAGAAGCAGGTAGCTGCTGCAGGTGCCACTGCCCA
GGCAAAGGAAGAGAACGATGATGATGTTCCAGAGCTTGTTCCGGGAGAGAATTTCGAAGA
GGTAGCTCAGGAGACAAAAGCCTGATCATAGATACCACAAGTAGTGAAATGTTACTTGAC
CGCTGTTCTGAGGTCATGGTTTTCTATGACGGCCCTGTTTTGCTTCTCCTCGTAGGCCAA
TCTTTGTATTTGCAATTGGAAACTTTTAGTTTCTCCGAGTTTTTACCTAAGTTATGAATG
CTGAGATGCCATGGAGTCCTTTTTACCTGGTTTTGATGTTCACATTTCTGGTTGGTTCAG
AATATACTAGCATCAGGGTTTGC