Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0850400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35790044:35795425:1 gene:Os03g0850400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartokinase. (Os03t0850400-01)
Sequence

CATGGCGGTGGCGCTCCGGTTCGCGGCCGTCGCGCGGGACTCGCCGGCGGCCGCCGCTCC
CCCCAGGGTGGGGAGGGAGCAGCGGCGGCGGTTGTCCTCAACAAGGACGACGCGGCGTCG
GTGGCCGCCGCCGCCGCCTCCTCCGCGACGGGGTTCACCGTCGCCATGAAGTTCGGCGGG
TCGTCGGTGGCGTCGGCGGAGCGGATGCGGGAGGTGGCCGATCTCATACTCAGCTTCCCC
GAGGAGACTCCCGTTGTTGTTCTCTCCGCCATGGGGAAGACCACCAATAACCTCCTCCTG
GCCGGAGAGAAGGCTGTCAGCTGCGGCGCCCCGAAGGCGTCTGAAATTCCCGAGCTCGCA
GTTATCAAGGAGCTCCATGTTAGGACTATTGATGAGCTTGGATTGGATAGATCGATTGTT
TCAGGTTTATTGGAAGAATTGGAACAACTTCTTAAGGGTGTTGCTATGATGAAAGAACTA
ACTCCTAGGACACGGGATTACCTTGTTTCCTTCGGTGAATGCATGTCTACAAGAATATTT
GCTGCATATTTGAATAAACTTGGGAAAAAGGCTCGGCAGTATGATGCATTTGATATTGGC
TTTATAACTACTGATGATTTCACAAATGCGGACATTCTTGAAGCGACATATCCTGCTGTT
GCAAAGAGGTTACAGGGTGATTGGATTGACGACCCTGCTATTCCTATAGTTACTGGTTTC
CTTGGAAAAGGATGGAAATCATGTGCTGTCACCACTTTAGGCAGAGGTGGCAGCGACTTG
ACTGCTACCACCATTGGCAAAGCGTTGGGATTAAGAGAGATCCAGGTATGGAAGGATGTT
GATGGTGTGTTGACATGTGATCCTAATATTTGTGCGAACGCGATACCTGTACCCTACTTG
ACTTTTGAGGAGGCAGCTGAACTTGCCTACTTTGGTGCACAGGTTTTGCATCCCCAATCA
ATGAGACCAGCCAAAGAAGGTGATATACCAGTTAGAGTTAAGAATTCATATAACCGTCGA
GCACCTGGTACTGTTATTACTAAAACAAGAGATTTGAGCAAGAGTATATTAACCAGCATT
GTATTGAAGTCAAACATTACTATGCTGGATATAGTGAGCACAAGGATGCTTGGCCAGTAT
GGTTTTCTGGCGAAGGTTTTCTCAATATTTGAAGATTTAGGTATCTCTGTTGATTGTGTG
GCTACCAGTGAAGTCAGTATATCATTGACACTAGATCCATCAAAACTATGGTGTCGTGAA
TTGATCCAGCAGGAACTTGATCATGTAGTTGAAGAACTTGAAAAAATTGCAGTTGTTCAT
CTACTGCAGCACAGGTCTATCATCTCACTGATAGGGAATGTACAGAGATCGTCATTGATT
CTTGAGAAGGCTTTCAATGTTCTACGGAGAAATGGCGTTAACGTCCAGATGATCTCACAA
GGGGCATCCAAGGTGAACATTTCATTGGTGGTCCATGATAGCGAGGCGAAACAGTGTATA
CAGGCCCTTCATTCAGCATTCTTTGAGAACGGTTTCTTGTCAGAAGTTGAGGAAGAGGAT
CTTCAACACAATGGCTCTCCTGTGAGCCCAAATGGTGTCATTTACGGAAACTAG

Peptide Sequence

PEP ID

Os03t0850400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35790044:35795425:1 gene:Os03g0850400 transcript:Os03t0850400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartokinase. (Os03t0850400-01)
Sequence

HGGGAPVRGRRAGLAGGRRSPQGGEGAAAAVVLNKDDAASVAAAAASSATGFTVAMKFGG
SSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASEIPELA
VIKELHVRTIDELGLDRSIVSGLLEELEQLLKGVAMMKELTPRTRDYLVSFGECMSTRIF
AAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIPIVTGF
LGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAIPVPYL
TFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKSILTSI
VLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSKLWCRE
LIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNVQMISQ
GASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQHNGSPVSPNGVIYGN

Transcript Sequence

Transcript ID

Os03t0850400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35790044:35795425:1 gene:Os03g0850400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aspartokinase. (Os03t0850400-01)
Sequence

AACCACCCCCTTCGCCTCGCCGCCACCTCCGCTTCGATCCTTGGAAGAGGTGAGGAGAGG
AGAGATCTAGAAGCTTCGGTCGGTGCTGACATGGCGGTGGCGCTCCGGTTCGCGGCCGTC
GCGCGGGACTCGCCGGCGGCCGCCGCTCCCCCCAGGGTGGGGAGGGAGCAGCGGCGGCGG
TTGTCCTCAACAAGGACGACGCGGCGTCGGTGGCCGCCGCCGCCGCCTCCTCCGCGACGG
GGTTCACCGTCGCCATGAAGTTCGGCGGGTCGTCGGTGGCGTCGGCGGAGCGGATGCGGG
AGGTGGCCGATCTCATACTCAGCTTCCCCGAGGAGACTCCCGTTGTTGTTCTCTCCGCCA
TGGGGAAGACCACCAATAACCTCCTCCTGGCCGGAGAGAAGGCTGTCAGCTGCGGCGCCC
CGAAGGCGTCTGAAATTCCCGAGCTCGCAGTTATCAAGGAGCTCCATGTTAGGACTATTG
ATGAGCTTGGATTGGATAGATCGATTGTTTCAGGTTTATTGGAAGAATTGGAACAACTTC
TTAAGGGTGTTGCTATGATGAAAGAACTAACTCCTAGGACACGGGATTACCTTGTTTCCT
TCGGTGAATGCATGTCTACAAGAATATTTGCTGCATATTTGAATAAACTTGGGAAAAAGG
CTCGGCAGTATGATGCATTTGATATTGGCTTTATAACTACTGATGATTTCACAAATGCGG
ACATTCTTGAAGCGACATATCCTGCTGTTGCAAAGAGGTTACAGGGTGATTGGATTGACG
ACCCTGCTATTCCTATAGTTACTGGTTTCCTTGGAAAAGGATGGAAATCATGTGCTGTCA
CCACTTTAGGCAGAGGTGGCAGCGACTTGACTGCTACCACCATTGGCAAAGCGTTGGGAT
TAAGAGAGATCCAGGTATGGAAGGATGTTGATGGTGTGTTGACATGTGATCCTAATATTT
GTGCGAACGCGATACCTGTACCCTACTTGACTTTTGAGGAGGCAGCTGAACTTGCCTACT
TTGGTGCACAGGTTTTGCATCCCCAATCAATGAGACCAGCCAAAGAAGGTGATATACCAG
TTAGAGTTAAGAATTCATATAACCGTCGAGCACCTGGTACTGTTATTACTAAAACAAGAG
ATTTGAGCAAGAGTATATTAACCAGCATTGTATTGAAGTCAAACATTACTATGCTGGATA
TAGTGAGCACAAGGATGCTTGGCCAGTATGGTTTTCTGGCGAAGGTTTTCTCAATATTTG
AAGATTTAGGTATCTCTGTTGATTGTGTGGCTACCAGTGAAGTCAGTATATCATTGACAC
TAGATCCATCAAAACTATGGTGTCGTGAATTGATCCAGCAGGAACTTGATCATGTAGTTG
AAGAACTTGAAAAAATTGCAGTTGTTCATCTACTGCAGCACAGGTCTATCATCTCACTGA
TAGGGAATGTACAGAGATCGTCATTGATTCTTGAGAAGGCTTTCAATGTTCTACGGAGAA
ATGGCGTTAACGTCCAGATGATCTCACAAGGGGCATCCAAGGTGAACATTTCATTGGTGG
TCCATGATAGCGAGGCGAAACAGTGTATACAGGCCCTTCATTCAGCATTCTTTGAGAACG
GTTTCTTGTCAGAAGTTGAGGAAGAGGATCTTCAACACAATGGCTCTCCTGTGAGCCCAA
ATGGTGTCATTTACGGAAACTAGTCGACTTAGCATTTCCTGCTATTGTTGTATCTTTGGA
ATTTGGATAGGTTTAAAGGTGATTCAGGCATATAGTCATTTAGGCCACCTAGGTGAAATG
GTGAATTCCCTGGTGTTGTAAGAGCCCTACAAGGAGCACCCTGTGTTAATGATAATCACG
CATAGCAGGCTCACTTATAATGTTAAGTTTGCTGCAATACCAGCGGTGCGATCG