Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0849900-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:35766994:35768986:1 gene:Os03g0849900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-diphospho-sugar transferase domain containing protein. (Os03t0849900-01);Nucleotide-diphospho-sugar transferase domain containing protein. (Os03t0849900-02)
Sequence

ATGGCGCCCAAGGTGGCGGTCACGGAGGCGACGGGGCGGCAGGCGGCGTCGTTCGTGCTC
GGCTGCGTGGCCACGCTCACCGTCATGCTGCTCTTCCAGTACCAGGCGCCGCCGGACTAC
GGCCGCGCCGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCAC
TGCGGCGGCAATGGAACGGCGCCGCCGCCGCCGGTGATCGCACGTGGCGGCGAGGAGGCT
AACATCACCGGCAAGCCTCCGACGACTGCTACTGCTGTCGCCGAGGAGCAGCCGCCAACC
AAGCCTCCTGCGACCTCTACTGCATCTTCACCAACTCATCATATTCCAGCAACCAGTACA
GATCTTGAAGAAGAGGGCGGCGAGTTCCGGGGGTTGGCGGCGGCGGTGGCGCGGGCGGCG
ACGGATGACCGGACGGTGATCATCACGTGCGTGAACCACGCGTTCGCGGCGCCCGACTCG
CTCCTGGACATCTTCCTCCAGGGCTTCCGCGTCGGCGACGGCACGCCGGAGCTCCTCCGC
CACGTCCTCGTCGTCGCCATGGATCCCACCGCGCTCACCCGGTGCCGCGCCGTCCACCCC
CACTGCTACCTCTACACCATGCCCGGCCTCGACGTCGACTTCACCTCCGAGAAGTTCTTC
GCCTCCAAGGACTACCTCGAGCTCGTCTGGAGCAAGCTCAAGCTCCAGCGCCGAATTCTC
CAGCTCGGCTACAACTTCCTCTTCACGGACGTTGACATTGTGTGGCTGAGGAATCCGTTC
AAGCACGTGGCGGTGTACGCGGACATGGCGATCTCGAGCGACGTGTTCTTCGGTGACCCG
GACAACATCGACAACTTCCCAAACACGGGCTTCTTCTACGTGAAGCCGAGCGCGAGGACG
ATCGCCATGACCAAGGAGTGGCACGAGGCGAGGAGCTCGCACCCGGGGCTCAACGAGCAG
CCGGTGTTCAACCACATCAAGAAGAAGCTGGTGAAGAAGCTGAAGCTCAAGGTTCAGTAC
CTGGACACGGCCTACATCGGCGGATTCTGCAGCTACGGCAAGGATCTGAGCAAGATCTGC
ACCATGCACGCCAACTGCTGCATCGGCCTCCAATCCAAGATCAGTGATCTCAAGGGTGTT
CTTGCTGACTGGAAGAACTACACCAGGTTGCCACCCTGGGCAAAGCCCAATGCCAGGTGG
ACTGTGCCTGGTAAATGCATCCATTGA

Peptide Sequence

PEP ID

Os03t0849900-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:35766994:35768986:1 gene:Os03g0849900 transcript:Os03t0849900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-diphospho-sugar transferase domain containing protein. (Os03t0849900-01);Nucleotide-diphospho-sugar transferase domain containing protein. (Os03t0849900-02)
Sequence

MAPKVAVTEATGRQAASFVLGCVATLTVMLLFQYQAPPDYGRAARSPVQFSTSRDQLLLH
CGGNGTAPPPPVIARGGEEANITGKPPTTATAVAEEQPPTKPPATSTASSPTHHIPATST
DLEEEGGEFRGLAAAVARAATDDRTVIITCVNHAFAAPDSLLDIFLQGFRVGDGTPELLR
HVLVVAMDPTALTRCRAVHPHCYLYTMPGLDVDFTSEKFFASKDYLELVWSKLKLQRRIL
QLGYNFLFTDVDIVWLRNPFKHVAVYADMAISSDVFFGDPDNIDNFPNTGFFYVKPSART
IAMTKEWHEARSSHPGLNEQPVFNHIKKKLVKKLKLKVQYLDTAYIGGFCSYGKDLSKIC
TMHANCCIGLQSKISDLKGVLADWKNYTRLPPWAKPNARWTVPGKCIH

Transcript Sequence

Transcript ID

Os03t0849900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35766994:35768986:1 gene:Os03g0849900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-diphospho-sugar transferase domain containing protein. (Os03t0849900-01);Nucleotide-diphospho-sugar transferase domain containing protein. (Os03t0849900-02)
Sequence

ATGGCGCCCAAGGTGGCGGTCACGGAGGCGACGGGGCGGCAGGCGGCGTCGTTCGTGCTC
GGCTGCGTGGCCACGCTCACCGTCATGCTGCTCTTCCAGTACCAGGCGCCGCCGGACTAC
GGCCGCGCCGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCAC
TGCGGCGGCAATGGAACGGCGCCGCCGCCGCCGGTGATCGCACGTGGCGGCGAGGAGGCT
AACATCACCGGCAAGCCTCCGACGACTGCTACTGCTGTCGCCGAGGAGCAGCCGCCAACC
AAGCCTCCTGCGACCTCTACTGCATCTTCACCAACTCATCATATTCCAGCAACCAGTACA
GATCTTGAAGAAGAGGGCGGCGAGTTCCGGGGGTTGGCGGCGGCGGTGGCGCGGGCGGCG
ACGGATGACCGGACGGTGATCATCACGTGCGTGAACCACGCGTTCGCGGCGCCCGACTCG
CTCCTGGACATCTTCCTCCAGGGCTTCCGCGTCGGCGACGGCACGCCGGAGCTCCTCCGC
CACGTCCTCGTCGTCGCCATGGATCCCACCGCGCTCACCCGGTGCCGCGCCGTCCACCCC
CACTGCTACCTCTACACCATGCCCGGCCTCGACGTCGACTTCACCTCCGAGAAGTTCTTC
GCCTCCAAGGACTACCTCGAGCTCGTCTGGAGCAAGCTCAAGCTCCAGCGCCGAATTCTC
CAGCTCGGCTACAACTTCCTCTTCACGGACGTTGACATTGTGTGGCTGAGGAATCCGTTC
AAGCACGTGGCGGTGTACGCGGACATGGCGATCTCGAGCGACGTGTTCTTCGGTGACCCG
GACAACATCGACAACTTCCCAAACACGGGCTTCTTCTACGTGAAGCCGAGCGCGAGGACG
ATCGCCATGACCAAGGAGTGGCACGAGGCGAGGAGCTCGCACCCGGGGCTCAACGAGCAG
CCGGTGTTCAACCACATCAAGAAGAAGCTGGTGAAGAAGCTGAAGCTCAAGGTTCAGTAC
CTGGACACGGCCTACATCGGCGGATTCTGCAGCTACGGCAAGGATCTGAGCAAGATCTGC
ACCATGCACGCCAACTGCTGCATCGGCCTCCAATCCAAGATCAGTGATCTCAAGGGTGTT
CTTGCTGACTGGAAGAACTACACCAGGTTGCCACCCTGGGCAAAGCCCAATGCCAGGTGG
ACTGTGCCTGGTAAATGCATCCATTGATTTTGATTGTCGATCGGGCAGTATCTGGTGTTG
TAGGCTACGTACAGTCAGGAAGATAGCTTTATTTGCACATGAAAGGGCGAATTTTGTTTT
TTTTGGTTTGTTGTAGATTGATGGGTCGATTTCAAGTTATATTACTGTATACCTGACGGC
AGACAAGTATACGCATGATGGGCAAACTATATGATATGATATGATATGATAGT