Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0847500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35625641:35629619:1 gene:Os03g0847500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alternative oxidase. (Os03t0847500-01)
Sequence

ATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGC
TCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCG
ATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTC
AGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAG
CTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTG
TACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTAT
TTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTC
ACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAA

Peptide Sequence

PEP ID

Os03t0847500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35625641:35629619:1 gene:Os03g0847500 transcript:Os03t0847500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alternative oxidase. (Os03t0847500-01)
Sequence

MVAVASASPLTAAAAPSMCCSPPAFLPLRAHRRRIFRAEAMKTQQEKKQTEVAVEESFPF
RETAPPDEPLVTAEESWVVKLEQSVNIFLTESVITILDGLYRDRNYARFFVLETIARVPY
FGEDLVVHARYSLQRLSLCFTCMKHLAGGGELII

Transcript Sequence

Transcript ID

Os03t0847500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35625641:35629619:1 gene:Os03g0847500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alternative oxidase. (Os03t0847500-01)
Sequence

GGCGGCGGACGGAGGGAGGGACGGCGCCGCTCGGGAGAGGGAGCGGGAGCGCGTGCGTCG
CCGGTGGCCGAGCCGAGCCGAGCTGCGTCGCGGTGGTGCTCTCCGCGGGCGGCGAGATTC
AGCCCTGACCCGAGGAAGGTGAGGGGAATTCTTCCTCGGGGGTGGGTTTGGTGCATTCCG
TGGTGTGAGATGCGGGGGATGAACAAGGCTTTCGGGGTTTGGGATGTCGCGGGGATTTGG
GGGCGGTGGGTGGTTTTCGGCTGGGAATTTGCGGATTTCGTGGCTGCTAGTGGTGTTCCC
GTGGCTTTACGAACAGATGTATATGCTTGATCTCGTGCGGCTTTCCCTTCTATCCCTCTC
TCCATGGTTTGCTCGCGTTGGGGGGTTTCGAAAAATTTTCCCTACTGTTAGTCCTCGATT
CTGGTCGTCGGCATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCC
TCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTC
CGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAG
TCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGC
TGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATA
CTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCT
AGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTA
TCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAAAGG
TGCACTTTGCTGAGAGCTGGAATGAGTTCCATCACCTCTTAATCATGGAAGTACGTCTCT
AGCTCTTTCTGTCTGCACATCAGTGCATTTATATATGCTGTTTCTTCCTGTTTTGATGTC
CTTTTAGATTATGTTAGCTGTTAGCATATCCCGTTTTCTTTAACTGAATATAATCTTTAA
AGGAATTCAACCTACTGCTTATTGACACATTATCTGTTTTTTTTTAATATTTTGGTTATG
GTCTTTGATGTTCTGACTTTATTCCTCATCTTGGTTCATATTAGGAATTGGGTGGCAACT
CTTTATGAGTTGATCGTTTTCTTGCATGGTTTGCTGCATTTTTTTACTACTTCATGACTG
TTGCGATGTCACGAGCCCCGGCGTAAGAACGTATGGGATATGAATGTGTGATTGGCGGTG
GACGAGGGGGTTTGGTGGAACGACGACCCGTGATGAACAGCAAGGGATGAGCAAATAGAG
AATAGGAGATGAGAGAACTAGAGATTGAATCTGCTTAATTAAACGCCACCGAAACTGTGC
CTCTAAATAGGCGTACACGAATTAACCAATGTGCTAAAAACAAGCTAACAAACTGATAAA
CAGACTAACAATCTGAACTCATCCAATCGCCGCACTGTAGTCATCCGGCACGCAGCTTCC
GCGCGCTACTCCGCCGTTCCGCCCGGCGACGCTTGCGGAACCACACGCCCTCTGCGACGA
TACGTAATCCCGACCATGACATGCGATGTACATGGTGAGCCCAAGAATGGCATGTAAGTG
TGCACCTATGCCAATTATGAAGTAAAACACTTCATTTTTATTTCCATGCCTTTTATGTAA
TGATAACGCTTGGAATTGTTTATCTTATATACATACCGCTTTTCTGAATGTGTTGAGAGG
CATGCGTACTCAACCTATGACAAGTTTATTAAGCTCCATGAAGGTAATAAAACGTTGATG
GATTTGACATCTCTCCTGTCGTGCAAAATTTTATCATGACAACTAGACATCTCAAAATTT
TTGTTGCTTTATCTAGGTTGGACAGACTTTGTAAACCAAAGTGGAAATGAGGGGACCGGG
AAAACTAAGTATTTACTTTTTTTATAGGGATAAGTTTATGCCTACCTTTTGTCACAGATT
GCCCTTGTGTGAATAATTTGATACATGCGCCAGTGAACTTATGTTATATCAGCTATTTAC
TTCAATTATTGGCAATCAGGATTCAGGCATGGTGTTTATTTTAGTTTTATAGGTATCGTG
TGCATAAATTCAAAAACATGTATTATTCTTCCATTTTTGATTAAGATGTCGGCTCTGGTA
TCCTTTTATGATGTACTATATTTAGATTTTTTTTCCGTCCTACATAGTGGTTACTTGAAT
TGTGGGAGAGTTGAAACATACCTGAAAAAATTAGCAAAGCTAGATCCCCTAAGGTCTGAA
CACCAAACTGGTAGACTCTTTGCATTACTATCCATTCAGAAGTTGATGCATTGTACATTT
TAAAGGGTGCATTTTAATAAACCAAAATGTTGAACACTGCAACCAATAACACCATGTCTA
CCCGACCTGTCCACCAACTAGAAATTTACAGGAACATCACACTCTGTCAATTATATTTAC
GTATTTCTTGGCAAAATAACATCCTGATCTGACCTTTGACTGCAGAAATGTAGCTGATGC
CATGCCTGCATGCCACCCATGAGTGGCATACCTAATATCAATATCAAGGAATGACTTCCT
GTAGTGCTCTTCTTCCTTGAGAGCACACGCAATAAGCTATCAAAGAGTATACAGCTTTTC
CAAGAAAACGAAAGGGAACGACAGAGAATTGCCACTCTCTAACCCAAGAAATATCACAGT
TGCAAGATCTTGGCAGCACACTTATTGAGTTGTGGAACCTAATGGACACACCAACTGCTG
AACAGAAATGCTTTGACCATGTTACGTCTTTGATTTCAGTCTCACCAAATACAAAAATGC
CCCAAGGATGCCTTGCACGTGAACTTATTGAGAAGTTTACAATTGATCGACCATTTTATG
TTCTTTTGCTTTATTTGGATTGTCATTGAAGCTAACTTAATTTTTCTGTAAAATCCGGTT
GAGGTTAAGAGGTTGAATTCTTCTGATCATTGTCAATACAACTATAGCGATTCATTGAGG
GTAAGAGCTCACATAACTTTTATGTGCTTTACT