Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0845000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:35524251:35526214:-1 gene:Os03g0845000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os03t0845000-01)
Sequence	ATGATGACGAGGAGCATGATGAAGTTTTTCTCTCCCTCCTCCTCCGCTATTTATACCACC CTCTCCTCTCGTCTCGCCAGGATCAACGCCACTCGCCACACACCGCCACCACCACCAAAG AGCAGCAGAGCAGCAAGATCACTAACCTCTTTCTTGCTGATTCGAGCAACCATGTCTTCT TCGTCTTCGTCGTCGGATGCTGTCGCCGCGGCGGCGGCGGCGACTTTTGAGAAGCCGAGG ACGGTGGTGAAGAAGCTCCTGGCGGAGTCCCAGCCCGAGGGCGACGGCGCCACCGTGCGA AGGAGCATCGGCAGGTACGAGCTCAGGAACCTGGATCCTTTCCTCATGCTCGATGAATTC TCTGTTTCCAAGCCTGCTGGATTTCCCGACCATCCGCATAGAGGATTCGAGACAGTCACC TACATGCTCGAAGGGGCGTTCACCCACCAAGACTTTGCAGGCCACAAGGGCACCATCGGC ACGGGAGATGTCCAGTGGATGACGGCTGGCCGCGGCATCGTGCACTCGGAGATGCCGGCA GCGGACGGTGTGCAGAAGGGCCTCCAGCTCTGGATCAACCTCTCTTCCAAGGACAAAATG ATTGAGCCGAGGTACCAGGAGCTTATGAGCAAGGACATCAGCTGCGCCGAGAAGGACGGC GTGGAGGTGAAGATCATCGCCGGCGAGGCCTTCGGGGTGCGTTCGCCGGTGTACACGCGG ACGCCGACGATGTACATGGACTTCACGATGCAGCCGGGGTCGCAGCTGCACCAGCCCATC CCGGAGGCCTGGAACGCCTTCGTCTACATCATCGACGGCGAGGGCGTGTTCGGGAGGGAG AAGGCGTCGCCGGCGACCGCCCACCACTGCCTCGTTCTCGGCCCCGGCGACGGCCTGAGC GTCTGGAATAAGTCCGGCGAGCCGCTCCGGTTCGCGCTCGTCGGCGGGCAGCCGCTCAAC GAGCCCGTGGTGCAGCATGGCCCCTTCGTGATGAACACCCGCGCCGAGATCCAGCAGGCC ATGGAGGATTACTACTATGGCAGGAATGGCTTCGAGAAGGCCCGCCATTGGAGCTCCACA GCATGA

Peptide Sequence

PEP ID	Os03t0845000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:35524251:35526214:-1 gene:Os03g0845000 transcript:Os03t0845000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os03t0845000-01)
Sequence	MMTRSMMKFFSPSSSAIYTTLSSRLARINATRHTPPPPPKSSRAARSLTSFLLIRATMSS SSSSSDAVAAAAAATFEKPRTVVKKLLAESQPEGDGATVRRSIGRYELRNLDPFLMLDEF SVSKPAGFPDHPHRGFETVTYMLEGAFTHQDFAGHKGTIGTGDVQWMTAGRGIVHSEMPA ADGVQKGLQLWINLSSKDKMIEPRYQELMSKDISCAEKDGVEVKIIAGEAFGVRSPVYTR TPTMYMDFTMQPGSQLHQPIPEAWNAFVYIIDGEGVFGREKASPATAHHCLVLGPGDGLS VWNKSGEPLRFALVGGQPLNEPVVQHGPFVMNTRAEIQQAMEDYYYGRNGFEKARHWSST A

Transcript Sequence

Transcript ID	Os03t0845000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35524251:35526214:-1 gene:Os03g0845000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os03t0845000-01)
Sequence	GCTAGTATTTATCCTCCTAGAGAGGGACATGGGGAGAGGAGGAGTGGATCCACGATGATG ACGAGGAGCATGATGAAGTTTTTCTCTCCCTCCTCCTCCGCTATTTATACCACCCTCTCC TCTCGTCTCGCCAGGATCAACGCCACTCGCCACACACCGCCACCACCACCAAAGAGCAGC AGAGCAGCAAGATCACTAACCTCTTTCTTGCTGATTCGAGCAACCATGTCTTCTTCGTCT TCGTCGTCGGATGCTGTCGCCGCGGCGGCGGCGGCGACTTTTGAGAAGCCGAGGACGGTG GTGAAGAAGCTCCTGGCGGAGTCCCAGCCCGAGGGCGACGGCGCCACCGTGCGAAGGAGC ATCGGCAGGTACGAGCTCAGGAACCTGGATCCTTTCCTCATGCTCGATGAATTCTCTGTT TCCAAGCCTGCTGGATTTCCCGACCATCCGCATAGAGGATTCGAGACAGTCACCTACATG CTCGAAGGGGCGTTCACCCACCAAGACTTTGCAGGCCACAAGGGCACCATCGGCACGGGA GATGTCCAGTGGATGACGGCTGGCCGCGGCATCGTGCACTCGGAGATGCCGGCAGCGGAC GGTGTGCAGAAGGGCCTCCAGCTCTGGATCAACCTCTCTTCCAAGGACAAAATGATTGAG CCGAGGTACCAGGAGCTTATGAGCAAGGACATCAGCTGCGCCGAGAAGGACGGCGTGGAG GTGAAGATCATCGCCGGCGAGGCCTTCGGGGTGCGTTCGCCGGTGTACACGCGGACGCCG ACGATGTACATGGACTTCACGATGCAGCCGGGGTCGCAGCTGCACCAGCCCATCCCGGAG GCCTGGAACGCCTTCGTCTACATCATCGACGGCGAGGGCGTGTTCGGGAGGGAGAAGGCG TCGCCGGCGACCGCCCACCACTGCCTCGTTCTCGGCCCCGGCGACGGCCTGAGCGTCTGG AATAAGTCCGGCGAGCCGCTCCGGTTCGCGCTCGTCGGCGGGCAGCCGCTCAACGAGCCC GTGGTGCAGCATGGCCCCTTCGTGATGAACACCCGCGCCGAGATCCAGCAGGCCATGGAG GATTACTACTATGGCAGGAATGGCTTCGAGAAGGCCCGCCATTGGAGCTCCACAGCATGA TTTCATCATCCTCCCTTCATACCATGACACACCATCACCATACATAATGCTGCTGAGCTG AACATGATGCTGTTTTTAGGCATATTAGTATATCATTTGATTCAGTAATAATAAATAGGT TTATTGTCATAAATTTTTCCTTGATTGGCTGTGTAATAAAACGATATCTGTGCAATGAAA ATGGTAGTAATATGATTGGATTTT