Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0843800-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:35467632:35469813:1 gene:Os03g0843800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HARMLESS TO OZONE LAYER 1 description:Methyl chloride transferase. (Os03t0843800-00)
Sequence

ATGGCGTCGGCGATCGTCGACGTCGCCGGAGGCGGCCGGCAGCAAGCCCTCGACGGCTCG
AACCCGGCGGTGGCACGGCTGCGTCAGCTCATCGGCGGCGGCCAAGAATCGTCGGATGGG
TGGAGCAGGTGCTGGGAGGAAGGCGTGACGCCGTGGGATCTCGGCCAGCGGACGCCGGCC
GTTGTCGAGCTGGTGCACTCCGGGACCCTCCCCGCCGGCGACGCCACCACCGTCCTCGTC
CCCGGCTGCGGCGCCGGATACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTC
GGCCTCGATATCTGTGACACGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCG
GCGGCGGCTGACGGCGGCGACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTC
TTCACGTGGGAGCCGCCGGAGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCT
CTGCATCCGTCGATGAGGCCAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGAC
GGAGAGCTCATCACCCTCATGTATTTGGCTGAAGGACAAGAGGCCGGGCCACCATTCAAT
ACAACAGTGCTCGATTACAAGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATC
GAGGACAATGAAGTCGCAGTTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAG
AGGATGACAAAATCCGACTAA

Peptide Sequence

PEP ID

Os03t0843800-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:35467632:35469813:1 gene:Os03g0843800 transcript:Os03t0843800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HARMLESS TO OZONE LAYER 1 description:Methyl chloride transferase. (Os03t0843800-00)
Sequence

MASAIVDVAGGGRQQALDGSNPAVARLRQLIGGGQESSDGWSRCWEEGVTPWDLGQRTPA
VVELVHSGTLPAGDATTVLVPGCGAGYDVVALSGPGRFVVGLDICDTAIQKAKQLSAAAA
AAADGGDGSSSFFAFVADDFFTWEPPEPFHLIFDYTFFCALHPSMRPAWAKRMADLLRPD
GELITLMYLAEGQEAGPPFNTTVLDYKEVLNPLGLVITSIEDNEVAVEPRKGMEKIARWK
RMTKSD

Transcript Sequence

Transcript ID

Os03t0843800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35467632:35469813:1 gene:Os03g0843800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HARMLESS TO OZONE LAYER 1 description:Methyl chloride transferase. (Os03t0843800-00)
Sequence

GTGCGTGTAGCTAGCTGATCAGTGACTCGAGGCCGGGGCACATGGCGTCGGCGATCGTCG
ACGTCGCCGGAGGCGGCCGGCAGCAAGCCCTCGACGGCTCGAACCCGGCGGTGGCACGGC
TGCGTCAGCTCATCGGCGGCGGCCAAGAATCGTCGGATGGGTGGAGCAGGTGCTGGGAGG
AAGGCGTGACGCCGTGGGATCTCGGCCAGCGGACGCCGGCCGTTGTCGAGCTGGTGCACT
CCGGGACCCTCCCCGCCGGCGACGCCACCACCGTCCTCGTCCCCGGCTGCGGCGCCGGAT
ACGATGTGGTTGCACTGTCCGGCCCCGGCCGCTTCGTCGTCGGCCTCGATATCTGTGACA
CGGCCATCCAGAAGGCGAAGCAGCTGTCGGCGGCGGCGGCGGCGGCGGCTGACGGCGGCG
ACGGGAGCAGCAGCTTCTTCGCCTTCGTCGCCGACGATTTCTTCACGTGGGAGCCGCCGG
AGCCGTTCCATCTCATCTTCGACTACACATTCTTCTGTGCTCTGCATCCGTCGATGAGGC
CAGCATGGGCGAAGAGAATGGCCGACCTGCTACGACCGGACGGAGAGCTCATCACCCTCA
TGTATTTGGCTGAAGGACAAGAGGCCGGGCCACCATTCAATACAACAGTGCTCGATTACA
AGGAGGTGCTGAACCCGTTGGGTTTAGTCATTACTTCTATCGAGGACAATGAAGTCGCAG
TTGAACCACGAAAGGGGATGGAGAAAATCGCAAGGTGGAAGAGGATGACAAAATCCGACT
AATAAGATAGTGGAGGACGCGCGCACTCCTTGTTCGCAGCATAATATGTCTACGTCACCC
GCACATGTCTCTAATAAAAAGAAGGAAAGAAGGAAAAATGAATTTAATGGGCCTGATTCG
AGCTTGTGCATCCGTGTAAATACATAATATAGTGTAATTATTCTATACATCTCTATGCAA
AATGTATGGCGTGGCTTAATTGTTACAGTAAATTAATTACTTTTGTCTTCT