Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0843600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:35453423:35460386:1 gene:Os03g0843600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CASTOR description:Ion channel DMI1.,Cation channen protein. (Os03t0843600-01)
Sequence	ATGCCCCTGGACCCCGACTCCTCGCCGGCGCCGCCGCACCGGGACTGGTTCTTCCCGCCG GCGCCGCCCTTCCTCCCGTCCTCCAGAGCCCGAACGCCGAGGGCCCCCTTCCCCTCCACC TCCCGCTCCTCCAATCCATACTCCTTCCCGGACCGCCGGCCGCCTCCTACCCCGCGCTCC CGCTCCCGCTCCCCCCTCCCGCCGCCGGAGCAGCAGAAGCAGCAGCAGCCGCCCCCGACG ACGCCTCCTCCCGCCCCGCGCCGTCGCGACCCCCGGTATGCTGGCGTCCGCCGTGGCGAT GTCCGAACGCTCACCGCCGAGAAAGCGGCGGCGGCGGCGGCGGTTCCTACGGCCGCGCAG GTGCACGGGAGCAAGTCAGCGGCGTCGGCGACCACCCTCCGATGGTCAGGGATGGTATCC GTGGCGGCTATTGTGCTCTGCTTCTCTTCCCTTGTCCGCAGTAACTCCTCGCTACATGAT CAGGTCCACCATTTGAAGGCTCAGCTTGCGGAAGCTACTACAAAATTGCAGTCTTGTATT ACAGAGTCCTCGATGGATATGAGTAGCATATTATCATATCAGAGCAATAACAGTACTTCG CAGAACAGAGGTCTTAAGAATTTCTCATTGCTGCTCTCGCTTTCTACGCTGTACGCCCCA TTACTCATTCTTAAGTACATGGACCTTTTCTTAAAGCTGAGGAGTTCGCAAGACTCCGAA GAAGAAGTTCCCATAAACAAGCGGTTGGCATACCGAGTTGATATATTTTTATCACTTCAA CCATATGCTAAACCCTTGGTTCTACTTGTTGCTACATTGTTACTTATTGGTCTTGGTGGC CTGGCTCTTTATGGTGTAAATGATGATAGCCTTTTAGATTGCCTCTGGCTGTCCTGGACC TTTGTTGCTGATTCGGGCAACCATGCAAACGCAGAAGGCTTTGGACCAAAGTTAGTTTCA GTTTCAATTAGTATCGGTGGGATGCTGGTTTTTGCCATGATGCTTGGGCTTGTAACAGAT TCGATCTCTGAGAAGTTTGATTCACTGAGGAAAGGAAGAAGTGAGGTCATAGAGCAAAGC CACACGCTGGTCCTTGGGTGGAGTGACAAACTGGGATCATTGCTGAACCAAATTGCTATT GCTAATGAAAGTTTGGGAGGAGGAACCATTGTAGTGATGGCTGAGAAAGACAAAGAGGAA ATGGAAGCAGACATTGCTAAAATGGAGTTTGACTTGAAAGGAACAGCTATAATTTGTAGA AGTGGAAGCCCTCTGATTCTAGCTGACTTGAAAAAGGTCTCAGTTTCTAAAGCGCGTGCA ATTGTGGTTTTAGCTGAAGAAGGAAATGCTGACCAGAGTGACGCACGCGCATTGCGAACA GTCTTGAGTTTAACTGGGGTCAAAGAAGGGCTAAGAGGTCACATAGTTGTTGAGCTTAGC GACCTTGACAATGAGGTTCTAGTCAAACTTGTTGGTGGAGACCTTGTGGAAACTGTTGTT GCACATGATGTGATAGGTCGTTTGATGATACAATGTGCACGTCAGCCAGGCCTTGCTCAG ATATGGGAAGATATCCTTGGCTTCGAAAACTGTGAGTTCTATATTAAAAGATGGCCTCAG TTGGATGGTATGCAATTTGAAGATGTGCTCATTAGCTTTCCTGATGCCATTCCATGTGGC ATAAAGGTGGCATCTTATGGTGGCAAGATTATTTTAAATCCGGATGACTTTTATGTCTTG CAAGAGGGTGATGAGGTGCTAGTAATTGCAGAAGATGATGACACATATGCCCCAGCGCCA TTACCCAAGGTTATGAGAGGTTACCTACCTAAAGATTTTGTTGTTCCCAAGTCTCCTGAA AGAATATTGTTTTGTGGTTGGCGGCGTGATATGGAAGATATGATAATGGTACTCGATGCT TTTCTAGCGCCAGGGTCAGAGTTGTGGATGTTCAATGACGTTCCTGAGATGGACAGAGAA AGAAAGCTGATAGACGGAGGCCTGGACTTCAGTCGTCTAGAAAATATTACTTTGGTTCAC CGTGAAGGAAATGCTGTTATTCGCCGTCACTTGGAGAGCCTCCCTTTAGAATCATTTGAT TCTATACTGATTCTGGCAGATGAATCTGTTGAGGATTCAGCAATCCAAGCTGATTCAAGG TCGCTTGCAACACTACTGCTGATCAGGGATATCCAGGCAAAGCGACTTCCATTCAGGGAG GCGATGGTTTCACATGTTACTCGAGGAAGCTTCTGTGAAGGTTCTTGGATTGGGGAGATG CAACAAGCATCTGATAAATCTGTCATAATCAGTGAGATTCTGGATCCTAGGACAAAAAAT TTATTGTCAGTGTCAAAAATCAGTGACTATGTTCTATCAAATGAACTAGTGAGCATGGCA TTGGCAATGGTTGCTGAAGATAGACAAATAAATGATGTCTTGGAGGAGCTATTTGCGGAG CAGGGGAACGAGATGCAAATACGACCAGCTGATCTCTACCTTCGAGAAGATGAGGAGTTA AATTTCTTTGAGGTCATGCTACGTGGTAGGCAGAGAAAAGAGATTGTCATTGGCTACCGT CTTGTGGATGCTGAACGCGCCATAATCAATCCACCAGACAAAGTTTCAAGGCGGAGATGG TCGGCCAAAGATGTTTTTGTTGTAATTACCGAGAAAGAATGA

Peptide Sequence

PEP ID	Os03t0843600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:35453423:35460386:1 gene:Os03g0843600 transcript:Os03t0843600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CASTOR description:Ion channel DMI1.,Cation channen protein. (Os03t0843600-01)
Sequence	MPLDPDSSPAPPHRDWFFPPAPPFLPSSRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRS RSRSPLPPPEQQKQQQPPPTTPPPAPRRRDPRYAGVRRGDVRTLTAEKAAAAAAVPTAAQ VHGSKSAASATTLRWSGMVSVAAIVLCFSSLVRSNSSLHDQVHHLKAQLAEATTKLQSCI TESSMDMSSILSYQSNNSTSQNRGLKNFSLLLSLSTLYAPLLILKYMDLFLKLRSSQDSE EEVPINKRLAYRVDIFLSLQPYAKPLVLLVATLLLIGLGGLALYGVNDDSLLDCLWLSWT FVADSGNHANAEGFGPKLVSVSISIGGMLVFAMMLGLVTDSISEKFDSLRKGRSEVIEQS HTLVLGWSDKLGSLLNQIAIANESLGGGTIVVMAEKDKEEMEADIAKMEFDLKGTAIICR SGSPLILADLKKVSVSKARAIVVLAEEGNADQSDARALRTVLSLTGVKEGLRGHIVVELS DLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQ LDGMQFEDVLISFPDAIPCGIKVASYGGKIILNPDDFYVLQEGDEVLVIAEDDDTYAPAP LPKVMRGYLPKDFVVPKSPERILFCGWRRDMEDMIMVLDAFLAPGSELWMFNDVPEMDRE RKLIDGGLDFSRLENITLVHREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSR SLATLLLIRDIQAKRLPFREAMVSHVTRGSFCEGSWIGEMQQASDKSVIISEILDPRTKN LLSVSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEQGNEMQIRPADLYLREDEEL NFFEVMLRGRQRKEIVIGYRLVDAERAIINPPDKVSRRRWSAKDVFVVITEKE

Transcript Sequence

Transcript ID	Os03t0843600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35453423:35460386:1 gene:Os03g0843600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CASTOR description:Ion channel DMI1.,Cation channen protein. (Os03t0843600-01)
Sequence	ACTCGTCAGAAGCATCCGCCGCCTACCTGCCAACCCCTAGAATTCCGAAAATGCCCCTGG ACCCCGACTCCTCGCCGGCGCCGCCGCACCGGGACTGGTTCTTCCCGCCGGCGCCGCCCT TCCTCCCGTCCTCCAGAGCCCGAACGCCGAGGGCCCCCTTCCCCTCCACCTCCCGCTCCT CCAATCCATACTCCTTCCCGGACCGCCGGCCGCCTCCTACCCCGCGCTCCCGCTCCCGCT CCCCCCTCCCGCCGCCGGAGCAGCAGAAGCAGCAGCAGCCGCCCCCGACGACGCCTCCTC CCGCCCCGCGCCGTCGCGACCCCCGGTATGCTGGCGTCCGCCGTGGCGATGTCCGAACGC TCACCGCCGAGAAAGCGGCGGCGGCGGCGGCGGTTCCTACGGCCGCGCAGGTGCACGGGA GCAAGTCAGCGGCGTCGGCGACCACCCTCCGATGGTCAGGGATGGTATCCGTGGCGGCTA TTGTGCTCTGCTTCTCTTCCCTTGTCCGCAGTAACTCCTCGCTACATGATCAGGTCCACC ATTTGAAGGCTCAGCTTGCGGAAGCTACTACAAAATTGCAGTCTTGTATTACAGAGTCCT CGATGGATATGAGTAGCATATTATCATATCAGAGCAATAACAGTACTTCGCAGAACAGAG GTCTTAAGAATTTCTCATTGCTGCTCTCGCTTTCTACGCTGTACGCCCCATTACTCATTC TTAAGTACATGGACCTTTTCTTAAAGCTGAGGAGTTCGCAAGACTCCGAAGAAGAAGTTC CCATAAACAAGCGGTTGGCATACCGAGTTGATATATTTTTATCACTTCAACCATATGCTA AACCCTTGGTTCTACTTGTTGCTACATTGTTACTTATTGGTCTTGGTGGCCTGGCTCTTT ATGGTGTAAATGATGATAGCCTTTTAGATTGCCTCTGGCTGTCCTGGACCTTTGTTGCTG ATTCGGGCAACCATGCAAACGCAGAAGGCTTTGGACCAAAGTTAGTTTCAGTTTCAATTA GTATCGGTGGGATGCTGGTTTTTGCCATGATGCTTGGGCTTGTAACAGATTCGATCTCTG AGAAGTTTGATTCACTGAGGAAAGGAAGAAGTGAGGTCATAGAGCAAAGCCACACGCTGG TCCTTGGGTGGAGTGACAAACTGGGATCATTGCTGAACCAAATTGCTATTGCTAATGAAA GTTTGGGAGGAGGAACCATTGTAGTGATGGCTGAGAAAGACAAAGAGGAAATGGAAGCAG ACATTGCTAAAATGGAGTTTGACTTGAAAGGAACAGCTATAATTTGTAGAAGTGGAAGCC CTCTGATTCTAGCTGACTTGAAAAAGGTCTCAGTTTCTAAAGCGCGTGCAATTGTGGTTT TAGCTGAAGAAGGAAATGCTGACCAGAGTGACGCACGCGCATTGCGAACAGTCTTGAGTT TAACTGGGGTCAAAGAAGGGCTAAGAGGTCACATAGTTGTTGAGCTTAGCGACCTTGACA ATGAGGTTCTAGTCAAACTTGTTGGTGGAGACCTTGTGGAAACTGTTGTTGCACATGATG TGATAGGTCGTTTGATGATACAATGTGCACGTCAGCCAGGCCTTGCTCAGATATGGGAAG ATATCCTTGGCTTCGAAAACTGTGAGTTCTATATTAAAAGATGGCCTCAGTTGGATGGTA TGCAATTTGAAGATGTGCTCATTAGCTTTCCTGATGCCATTCCATGTGGCATAAAGGTGG CATCTTATGGTGGCAAGATTATTTTAAATCCGGATGACTTTTATGTCTTGCAAGAGGGTG ATGAGGTGCTAGTAATTGCAGAAGATGATGACACATATGCCCCAGCGCCATTACCCAAGG TTATGAGAGGTTACCTACCTAAAGATTTTGTTGTTCCCAAGTCTCCTGAAAGAATATTGT TTTGTGGTTGGCGGCGTGATATGGAAGATATGATAATGGTACTCGATGCTTTTCTAGCGC CAGGGTCAGAGTTGTGGATGTTCAATGACGTTCCTGAGATGGACAGAGAAAGAAAGCTGA TAGACGGAGGCCTGGACTTCAGTCGTCTAGAAAATATTACTTTGGTTCACCGTGAAGGAA ATGCTGTTATTCGCCGTCACTTGGAGAGCCTCCCTTTAGAATCATTTGATTCTATACTGA TTCTGGCAGATGAATCTGTTGAGGATTCAGCAATCCAAGCTGATTCAAGGTCGCTTGCAA CACTACTGCTGATCAGGGATATCCAGGCAAAGCGACTTCCATTCAGGGAGGCGATGGTTT CACATGTTACTCGAGGAAGCTTCTGTGAAGGTTCTTGGATTGGGGAGATGCAACAAGCAT CTGATAAATCTGTCATAATCAGTGAGATTCTGGATCCTAGGACAAAAAATTTATTGTCAG TGTCAAAAATCAGTGACTATGTTCTATCAAATGAACTAGTGAGCATGGCATTGGCAATGG TTGCTGAAGATAGACAAATAAATGATGTCTTGGAGGAGCTATTTGCGGAGCAGGGGAACG AGATGCAAATACGACCAGCTGATCTCTACCTTCGAGAAGATGAGGAGTTAAATTTCTTTG AGGTCATGCTACGTGGTAGGCAGAGAAAAGAGATTGTCATTGGCTACCGTCTTGTGGATG CTGAACGCGCCATAATCAATCCACCAGACAAAGTTTCAAGGCGGAGATGGTCGGCCAAAG ATGTTTTTGTTGTAATTACCGAGAAAGAATGAGTTACATCATTTAGCAAACCATGAGAAA TCACCACTAGTAAGGCAAAATTGACAGCAGTGCACGTAAGAGATCAACACGAGCAGACGA CTGTTGCATTGCAGAATTGACATCCGGAAGAAGGCCAAGCACTAACTGCGTCAGCGCGAG AGAGCAATGCATAACCAGATTTTGGGATCAATCTCGGGCTATGACTTGCCAATTGCAATG TACATAAGTGCGGAATGATCCATGCCATTGCGCAGAAAGGATGAGAAGAGAAACACCAAG CACGATTTGCTTAGATCAGTTTTGTTTTTTTAGAGAGGGGCTTCGATCCTGTTTATTGTA TAGTATTACATCTTTTTTGTGTACTCTGTTAGAAACTTCCAAATACTCCGTTGGCTCCGA TTGCTGTACACGCGAACAACAAATTCGTATCTTACACTAATGTATGACAAAAGATGGCAA AGTAACCTGGTACAATTGGTC