Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0839200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:35266207:35269744:1 gene:Os03g0839200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os03t0839200-01)
Sequence	ATGGCCATCCCGCTGCAGGGGAAGGCGCAGCAGCAGCAAGGGGAGGGCGGCAAGGGCGAC GGCGCGGTGGATGACGACGGGGACGACCAGCCGTCGGTGGCGTCGGAGCTGCGTGAGCTG TGGGGGATGGCGGCGCCGATCACGGCGCTCAACTGCGTCGTCTACCTGCGCGCGATGGTG TCCGTGCTCTGCCTCGGCCGCCTCGGCCCGCTCGACCTCGCCGGCGGCGCGCTCGCCATC GGCCTCACCAACATCACCGGCCACAGCGTCCTCTTCGGCCTCGCCTCCGGCCTCGAGCCG CTCTGCGCCCAGGCGTTCGGCTCCAAGAACTACGACCTCCTCACGCTCTCGCTCCAGCGC GCCGTCCTGCTGCTCACCCTCGCCGCGCTGCCCATCGCGCTGCTCTGGCTTCACGTCGGC CCCATCCTCGTCGCGCTCGGCCAGGACCCCACCATCTCCGCCTCCGCCGCCGCGTACGCC GCCTACGCGCTCCCGGACCTCGCCGCCAGCGCCGTGCTCCAGCCGCTGCGCGTCTACCTC CGCTCGCAGGGGATCACCAAGCCCATGGCCGCCTGCTCCGCCATCGCCGTCGCGCTCCAC GTCCCGCTCAACGTGCTCCTCGTGTTCGGCCTCGGCTTCGGCGTGCGCGGCGTCGCGGCC GCGCAGGCGCTCACCAACACCAACATGGTCCTCTTCCTCCTCGCCTACATCCGCTGGTCG CGCGCCTGCGACGCCACGTGGAAGGGCTGGGCGCGCCCCGCCGCCGTGGCGAGCGGCCTC GCCGGCCTCGTCCGCCTCGCCGTGCCCAGCTGCGTCGGCGTCTGCCTCGAGTGGTGGTGG TACGAGGTGGTCACCGTGCTCGCCGGGTACCTGCCGGACCCCGCCGCCGCGGTCGGCGCC GCCGGCGTGCTCATCCAGACCACGAGCCTCATGTACACCGTGCCCATGGCGCTCGCCGCC TGTGTCTCTACTCGGGTGGGGAATGAACTGGGGGGAGGGAAGCCGAGGAGGGCGAGGATG GCGGCGATGGTGGCGCTGGGGTGCGCGGTGGTGATCGGGGTGGTGCACGTGGCGTGGACG GCGGCGTTCAGCCGGGAGTGGGTGGAGCTGTTCACGCGGGAGGCGGCGGTGGTGAGGCTG GCGGCGGCGGCGATGCCCATCCTGGGGCTGTGCGAGCTGGGCAACTGCCCGCAGACCACG GGCTGCGGCGTGCTGCGCGGCACGGCGAGGCCGGCCGTCGGCGCGCGCATCAACCTGCTC TCCTTCTACCTCGTCGGCACCCCCGTCGCCGTCACCCTGGCGTTCGGCGCCCGCGTCGGC TTCGGCGGCCTCTGGTACGGCCTCCTCTCCGCGCAGGCCGCCTGCGTCGCGCTGGTCCTC CTCGCCGTCGTGTGGCGCACCGACTGGCACCTCGAGGCCCTCCGCGCCAAGAAGCTCACC GGCCTCGAGATGATCGCCGCCGCCGCCGAAGGCGACGACGACGAGTGCAAGCGCCTCATC GCGCCGCTGCCGCCGCCCGATGGTCACGATGTCGCCGTCGACGTCGTGTAG

Peptide Sequence

PEP ID	Os03t0839200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:35266207:35269744:1 gene:Os03g0839200 transcript:Os03t0839200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os03t0839200-01)
Sequence	MAIPLQGKAQQQQGEGGKGDGAVDDDGDDQPSVASELRELWGMAAPITALNCVVYLRAMV SVLCLGRLGPLDLAGGALAIGLTNITGHSVLFGLASGLEPLCAQAFGSKNYDLLTLSLQR AVLLLTLAALPIALLWLHVGPILVALGQDPTISASAAAYAAYALPDLAASAVLQPLRVYL RSQGITKPMAACSAIAVALHVPLNVLLVFGLGFGVRGVAAAQALTNTNMVLFLLAYIRWS RACDATWKGWARPAAVASGLAGLVRLAVPSCVGVCLEWWWYEVVTVLAGYLPDPAAAVGA AGVLIQTTSLMYTVPMALAACVSTRVGNELGGGKPRRARMAAMVALGCAVVIGVVHVAWT AAFSREWVELFTREAAVVRLAAAAMPILGLCELGNCPQTTGCGVLRGTARPAVGARINLL SFYLVGTPVAVTLAFGARVGFGGLWYGLLSAQAACVALVLLAVVWRTDWHLEALRAKKLT GLEMIAAAAEGDDDECKRLIAPLPPPDGHDVAVDVV

Transcript Sequence

Transcript ID	Os03t0839200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35266207:35269744:1 gene:Os03g0839200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os03t0839200-01)
Sequence	GAGGCAGCATAGCTCGGAGACAGCAAAGCTACAAAGTAGAATCAAAGACATCCAAGATTT GCCATGGCCATCCCGCTGCAGGGGAAGGCGCAGCAGCAGCAAGGGGAGGGCGGCAAGGGC GACGGCGCGGTGGATGACGACGGGGACGACCAGCCGTCGGTGGCGTCGGAGCTGCGTGAG CTGTGGGGGATGGCGGCGCCGATCACGGCGCTCAACTGCGTCGTCTACCTGCGCGCGATG GTGTCCGTGCTCTGCCTCGGCCGCCTCGGCCCGCTCGACCTCGCCGGCGGCGCGCTCGCC ATCGGCCTCACCAACATCACCGGCCACAGCGTCCTCTTCGGCCTCGCCTCCGGCCTCGAG CCGCTCTGCGCCCAGGCGTTCGGCTCCAAGAACTACGACCTCCTCACGCTCTCGCTCCAG CGCGCCGTCCTGCTGCTCACCCTCGCCGCGCTGCCCATCGCGCTGCTCTGGCTTCACGTC GGCCCCATCCTCGTCGCGCTCGGCCAGGACCCCACCATCTCCGCCTCCGCCGCCGCGTAC GCCGCCTACGCGCTCCCGGACCTCGCCGCCAGCGCCGTGCTCCAGCCGCTGCGCGTCTAC CTCCGCTCGCAGGGGATCACCAAGCCCATGGCCGCCTGCTCCGCCATCGCCGTCGCGCTC CACGTCCCGCTCAACGTGCTCCTCGTGTTCGGCCTCGGCTTCGGCGTGCGCGGCGTCGCG GCCGCGCAGGCGCTCACCAACACCAACATGGTCCTCTTCCTCCTCGCCTACATCCGCTGG TCGCGCGCCTGCGACGCCACGTGGAAGGGCTGGGCGCGCCCCGCCGCCGTGGCGAGCGGC CTCGCCGGCCTCGTCCGCCTCGCCGTGCCCAGCTGCGTCGGCGTCTGCCTCGAGTGGTGG TGGTACGAGGTGGTCACCGTGCTCGCCGGGTACCTGCCGGACCCCGCCGCCGCGGTCGGC GCCGCCGGCGTGCTCATCCAGACCACGAGCCTCATGTACACCGTGCCCATGGCGCTCGCC GCCTGTGTCTCTACTCGGGTGGGGAATGAACTGGGGGGAGGGAAGCCGAGGAGGGCGAGG ATGGCGGCGATGGTGGCGCTGGGGTGCGCGGTGGTGATCGGGGTGGTGCACGTGGCGTGG ACGGCGGCGTTCAGCCGGGAGTGGGTGGAGCTGTTCACGCGGGAGGCGGCGGTGGTGAGG CTGGCGGCGGCGGCGATGCCCATCCTGGGGCTGTGCGAGCTGGGCAACTGCCCGCAGACC ACGGGCTGCGGCGTGCTGCGCGGCACGGCGAGGCCGGCCGTCGGCGCGCGCATCAACCTG CTCTCCTTCTACCTCGTCGGCACCCCCGTCGCCGTCACCCTGGCGTTCGGCGCCCGCGTC GGCTTCGGCGGCCTCTGGTACGGCCTCCTCTCCGCGCAGGCCGCCTGCGTCGCGCTGGTC CTCCTCGCCGTCGTGTGGCGCACCGACTGGCACCTCGAGGCCCTCCGCGCCAAGAAGCTC ACCGGCCTCGAGATGATCGCCGCCGCCGCCGAAGGCGACGACGACGAGTGCAAGCGCCTC ATCGCGCCGCTGCCGCCGCCCGATGGTCACGATGTCGCCGTCGACGTCGTGTAGGACGAC GTCGTTTACGATCGTGCACGTACGCTTTTGGTTTTGGGTACACGGCGACGCATGGCGCGG ACACATGCATCGATCGATCGTTGATCGTACGGACCGAATTGGCCTAGCTATATGCTGCTG ATCATACGCTACGCGCTGCAAGTTGGGGCGTCAGTGGCTGAAGCTGCGTGCGTGCGTGGT TGGAAAATGACAGGGGCTGAATTAGATTAAGTGGGCTAGCAATATCAGGATCAACAAGCT ATATATAGCTACAAGCACTGGTGAGGTGGGTTTGTTTTGTGTGTACATGTGCGTGTTTGT GTGAGTGTTGACAAGTTGAGATCGATGGCGATGGAACATGCAACGTGTACTGCTAGATGA TCAGGAGCTAGCTAGGCCTGCCTGAATGATGATCATGGAGTATGATATTGCA