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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0839000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35255869:35258649:-1 gene:Os03g0839000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0839000-01)
Sequence

ATGAGCTCCTCGTCGGCGTCGGCTGTGCCGCCGGAGGACGACGTCTGCTCGGTCTGCCAC
GACCGCTTCCGGATCCCCTGCCAGGCCAACTGCTCCCATTGGTTCTGCGGAGAGTGCATT
ATCCGTGTTTGGAATCATGGACCTTCTGTACAGCCTTGCAAGTGTCCCATTTGCCGTCGC
CTTATTAATCTTCTGGTACCAGCAAATGTATCAATAGATAATGATGATGATCCGCAAATT
CAGCATGTTCTAGGAGAGGTTCAGCATTACAACCGCATATTTGGTGGAACACCCCGCAAC
CTGACTCAGAGGTTGCAAGACCTACCCTTTTTCATCAGAAGACTGTTCAGGGAACTACTG
GATCCCCAGAGGACCCTCCCACTTGTCTTCAGGGCGAGGATGGTCATGATGGTAGCCCTG
AGTGCAATTTATGTCCTGAGCCCCATCGACATTCTTCCTGAAAACGTGCTGGGGCTGTTT
GGATTCTTCGATGACTTCCTCGTGCTGCTGATCGTGTTCCTCCACCTTGCTGCTGTCTAC
CGTTCTCTGCTGCTCTACCGCCACGGAGGCCACTGA

Peptide Sequence

PEP ID

Os03t0839000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35255869:35258649:-1 gene:Os03g0839000 transcript:Os03t0839000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0839000-01)
Sequence

MSSSSASAVPPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVWNHGPSVQPCKCPICRR
LINLLVPANVSIDNDDDPQIQHVLGEVQHYNRIFGGTPRNLTQRLQDLPFFIRRLFRELL
DPQRTLPLVFRARMVMMVALSAIYVLSPIDILPENVLGLFGFFDDFLVLLIVFLHLAAVY
RSLLLYRHGGH

Transcript Sequence

Transcript ID

Os03t0839000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35255869:35258649:-1 gene:Os03g0839000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0839000-01)
Sequence

CTCTTGCCGACGACTCGGAAAAAAACCGCGGACACCGCGTCCGCTCGACGGAGGGAAGGG
GATGAGCTCCTCGTCGGCGTCGGCTGTGCCGCCGGAGGACGACGTCTGCTCGGTCTGCCA
CGACCGCTTCCGGATCCCCTGCCAGGCCAACTGCTCCCATTGGTTCTGCGGAGAGTGCAT
TATCCGTGTTTGGAATCATGGACCTTCTGTACAGCCTTGCAAGTGTCCCATTTGCCGTCG
CCTTATTAATCTTCTGGTACCAGCAAATGTATCAATAGATAATGATGATGATCCGCAAAT
TCAGCATGTTCTAGGAGAGGTTCAGCATTACAACCGCATATTTGGTGGAACACCCCGCAA
CCTGACTCAGAGGTTGCAAGACCTACCCTTTTTCATCAGAAGACTGTTCAGGGAACTACT
GGATCCCCAGAGGACCCTCCCACTTGTCTTCAGGGCGAGGATGGTCATGATGGTAGCCCT
GAGTGCAATTTATGTCCTGAGCCCCATCGACATTCTTCCTGAAAACGTGCTGGGGCTGTT
TGGATTCTTCGATGACTTCCTCGTGCTGCTGATCGTGTTCCTCCACCTTGCTGCTGTCTA
CCGTTCTCTGCTGCTCTACCGCCACGGAGGCCACTGAATTGCTGCTGCACATTACGTGAT
GGCAGATGGAGTACTTGCGTCCCTGGCTGACGTTCTGAGACAAGAGATATTTCATTTGTG
CTGGAAGAGATTGCTAGCTAAAGTCGATGATGATTGATGGTACGAATGATGGCGGCAGTA
GTTTCTCTCCCCCTGTGTATTCTATTTCGCTATGCTATGCCTTGTTTGGTGATATTCACA
TGGTGGATTTAATGAGACC