Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0838900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35252892:35255136:-1 gene:Os03g0838900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochodrial transcription termination factor-related domain containing protein. (Os03t0838900-01)
Sequence

ATGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGC
CTCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATAT
GGAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACT
CAGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGT
GACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAA
GACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCACCATACTGGAGTGAA
GAGAGAAAGAAGGAGGTTCCAAATGCTGAGGTGGTTAGTGGAGTACTGAACTACATTAGA
ACTCTTGGGCTCTCCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCAGAAGTACTT
GGATGTGATCTTGACAGCGAGGTGAAACTGAATGTAGGCAAGCTGGACAGTGACTGGGGA
ATAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAAT
GTGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAG

Peptide Sequence

PEP ID

Os03t0838900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35252892:35255136:-1 gene:Os03g0838900 transcript:Os03t0838900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochodrial transcription termination factor-related domain containing protein. (Os03t0838900-01)
Sequence

MLAKSPSLPFLTATETAAISLSPSCDLFSSPNARFSKKKYGGRLTIQPNIEFGKTQNSRT
QRKWRTFSADQAQATVVDAGDNKTWEEAKQILTSLDYSIEDADKMLKKAFGWIHSPYWSE
ERKKEVPNAEVVSGVLNYIRTLGLSDDDLRKLLKKFPEVLGCDLDSEVKLNVGKLDSDWG
INGKTLRSLLLRNPKVLGYNVDCRGDCMAQCTRCWVRF

Transcript Sequence

Transcript ID

Os03t0838900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35252892:35255136:-1 gene:Os03g0838900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochodrial transcription termination factor-related domain containing protein. (Os03t0838900-01)
Sequence

ACAGACACAACTCGTCTTCTCCTCGAGGAGCTAGCAACCGGCTAGCGGAGCAAGAGCAAA
GCCTTCAGGAATCAGGAGGCGGCCAGATTCGCGCGCGGTTCCTCCCTCCTGTGCGTGCGA
TGTTGGCGAAATCCCCATCATTGCCTTTCTTAACTGCTACTGAAACTGCTGCGATCAGCC
TCTCTCCAAGCTGTGATCTCTTTAGTTCACCAAATGCGAGATTTTCCAAGAAGAAATATG
GAGGAAGATTAACTATCCAGCCAAACATTGAATTTGGAAAAACTCAAAATAGTAGGACTC
AGAGAAAATGGAGGACATTCTCCGCTGATCAAGCTCAAGCTACCGTTGTCGATGCTGGTG
ACAACAAAACATGGGAAGAAGCCAAACAGATACTAACATCACTGGATTACTCCATTGAAG
ACGCCGACAAAATGCTGAAGAAGGCATTTGGATGGATTCATTCACCATACTGGAGTGAAG
AGAGAAAGAAGGAGGTTCCAAATGCTGAGGTGGTTAGTGGAGTACTGAACTACATTAGAA
CTCTTGGGCTCTCCGATGATGACCTTCGCAAATTGCTGAAGAAATTCCCAGAAGTACTTG
GATGTGATCTTGACAGCGAGGTGAAACTGAATGTAGGCAAGCTGGACAGTGACTGGGGAA
TAAATGGAAAAACACTCCGGAGTCTTCTTTTAAGGAATCCAAAAGTTTTGGGGTACAATG
TGGACTGCCGAGGGGACTGCATGGCGCAGTGCACCCGTTGCTGGGTTAGGTTCTAGTTCT
GCTCTACGTTAATGTGCAGAACTTACAGTTGAATTATAGGTTCCCAGCTATTTGTCTATT
TCTATATCGGTTACTCAAAACCTCTCTTAACATAAACAAAACACATTTATAGTAGATGGA
TTAGCCTCAGCATGTTAGTTTTGTTTACATCTTGAACAGCACCTTTTCCATACTATCTGT
ATCAGGGATGTAAAAACAAATATATCAGATACCTGAATTTCTGTGAGTGCTTCAACGT