Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0837800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35208499:35211344:-1 gene:Os03g0837800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoplasmic reticulum ERp29-type, C-terminal domain containing protein. (Os03t0837800-01)
Sequence

ATGTCGGCGGCGGCGAAGGCGAAGGCGAGCGGCGGCGGGAGGCGGGGAGGAGCCAAGGAC
CCAACCGACGCGCTCCGCTCCGACAAGAAGCGCCGCGACATGGACGACTCCGACGACGCC
GAGCTCGACAGTGACATGAAGGAGATCGTGTTGCTGCTGCGCCAGATCAAGGACAAGGCT
CACAAGGATGGCCAGAAGAAGACCGAGCAAACCCTCTCCAGTGTTGCTACAGAAATTCAG
ACTATCGTACAGGATGCCAAGGGCAAGTTTGAGAAGGAAAGGCAAAATTATCTGAAAGTT
CTATCAAAGACTTCAAAAGAGTGTGAAGGTTTACTGAAGAACGAGTACACCAAGTTTCAA
GCAACACATGATAAATTCTGCAAAGAAAAAGCTGCACACATGCAAACTCTCAAAGACCTT
TTCTCAAAGTTCGAAGATGCAAAGGAGAAATTACTTATCCAGTATGAACTGCAAAGGAAG
AAGGAGAAGGCTACTCTGTCTGAACTCGAGAAAACATTTTCAGAGAAGATAACTAATGCA
GAAGAATCTCTGAAGAAGATGAAGCAGGATGACAAATCCATTGTCAACCTTCGCAAGTCC
ATTGGCTCATTCCTGGACCCGGATGATGAGTTTGGAGCAGACGATGACTGA

Peptide Sequence

PEP ID

Os03t0837800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35208499:35211344:-1 gene:Os03g0837800 transcript:Os03t0837800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoplasmic reticulum ERp29-type, C-terminal domain containing protein. (Os03t0837800-01)
Sequence

MSAAAKAKASGGGRRGGAKDPTDALRSDKKRRDMDDSDDAELDSDMKEIVLLLRQIKDKA
HKDGQKKTEQTLSSVATEIQTIVQDAKGKFEKERQNYLKVLSKTSKECEGLLKNEYTKFQ
ATHDKFCKEKAAHMQTLKDLFSKFEDAKEKLLIQYELQRKKEKATLSELEKTFSEKITNA
EESLKKMKQDDKSIVNLRKSIGSFLDPDDEFGADDD

Transcript Sequence

Transcript ID

Os03t0837800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35208499:35211344:-1 gene:Os03g0837800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoplasmic reticulum ERp29-type, C-terminal domain containing protein. (Os03t0837800-01)
Sequence

ACACTCGCACACCGCACCAGCGATGTCGGCGGCGGCGAAGGCGAAGGCGAGCGGCGGCGG
GAGGCGGGGAGGAGCCAAGGACCCAACCGACGCGCTCCGCTCCGACAAGAAGCGCCGCGA
CATGGACGACTCCGACGACGCCGAGCTCGACAGTGACATGAAGGAGATCGTGTTGCTGCT
GCGCCAGATCAAGGACAAGGCTCACAAGGATGGCCAGAAGAAGACCGAGCAAACCCTCTC
CAGTGTTGCTACAGAAATTCAGACTATCGTACAGGATGCCAAGGGCAAGTTTGAGAAGGA
AAGGCAAAATTATCTGAAAGTTCTATCAAAGACTTCAAAAGAGTGTGAAGGTTTACTGAA
GAACGAGTACACCAAGTTTCAAGCAACACATGATAAATTCTGCAAAGAAAAAGCTGCACA
CATGCAAACTCTCAAAGACCTTTTCTCAAAGTTCGAAGATGCAAAGGAGAAATTACTTAT
CCAGTATGAACTGCAAAGGAAGAAGGAGAAGGCTACTCTGTCTGAACTCGAGAAAACATT
TTCAGAGAAGATAACTAATGCAGAAGAATCTCTGAAGAAGATGAAGCAGGATGACAAATC
CATTGTCAACCTTCGCAAGTCCATTGGCTCATTCCTGGACCCGGATGATGAGTTTGGAGC
AGACGATGACTGAAACTGCTGTTGCCAAAATGGTCCTTTTAGAACGCCGTGGATAGTATT
TGAGAATATCGATAGTATATATATGAACAGAAGTTACAAAGTTCTGTAGAGATTTGGTAG
CATCATACAGTTAGGTACCACATCATCCGTTATTTTGTTTTAAGTTCATTGGGTTAGGCG
GTTCCATCATCTGTTTTAAATGCATCTTGGTCGATTCAACAGCAAGAGGCTCAAGATTGT
TTAACCTCTTTGGCCTGATTTTCCTTCTTATATAGGAGTAAGTCATAACCAGTAGCTCGC
TAAACTTACTTGTCAATATATTTGTATATTTGCAACAAATTATTCATATACAGTATCAGA
TTTGTATATCAACAGCATAGAATTGCAATGAATCTTCCTTCTAATTTAC