Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0835400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:35100372:35103525:1 gene:Os03g0835400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETFA description:Similar to Uvs101. (Os03t0835400-01)
Sequence

ATGGCGGCGATGGTGGTGGGAGCGTTGAGGAGGGGAACGGCCACCGCCGGGGGGAGCTCG
CGGTCCTTCGCCCGATCGCTCCCTAGACCTGTGAGCACGCTGGTCGTAGCGGAGCACGAA
GGTGGGTTCGTGAAGCCCTCATCTCTGAGCGCATTGGCGGCCGCAGAAGCAATCGGCAAG
GATGATAATAGGGTTTCTCTTCTGTTGGGCGGATCCGGGCCGGGGCTTCACAAGGCTGCC
GAGCATGCTGCGTCCAGCCATCCATTGGTATCCGAGGTTCTTGTTGCTGATTCAGATGTC
TTTGCGCATCCATTGGCTGAGCCTTGGGCCGAGCTACTTCGTTCTGTTCAGCACAAAGGT
GGATACTCACATGTTATAGCGTCATCAACCTCGTTCGGGAAGAATTTGCTTCCACGTGCT
GCTGCCCTTCTTGATGTGTCCCCTGTTACGGATGTCACTTCAATATCTGAGCCACGAGTC
TTTGTGAGGCCCATTTATGCTGGAAATGCGCTTTGTACTGTGCGATATACTGGAGAGGAT
CCATGTATGATGAGCATTAGGTCAACATCATTTTCCCCAACTGAGGCTATGTCAGAAGCA
AAAGTTGCACCTATCACCCAGGTTGATCTCTCTTTCCTCAGTGAAGGAAGCTCTGGGAAA
TCTGCATGGGTGAATCTGAAATCCCAAGATACAGAACGGCCCGATCTTGCAAATGCACCC
GTAGTAGTAACTGGAGGCAGAGGTTTAAAAAGTGCTGAGAATTTCAAAGTATTGGAGCAG
CTTGCTGAGAAACTTGGAGCAGCAGTGGGTGCGACCAGAGCTGCCGTAGATGCAGGATTT
GTTCCCAATGAACTTCAGGTTGGTCAGACTGGGAAAATAGTTGCGCCTGAGCTCTATATG
GCATTTGGAGTATCCGGAGCAATACAACACTTGGCAGGAATGAGAGATTCCAAGGTTATC
GTGGCTGTCAACAAAGATGCAGATGCTCCCATATTTCAGGTTGCGGACTATGGCATTGTT
GCTGATCTATTCGAAGTTCTTGACGAACTGTTAAAGAAGCTACCTGACAAGAAATGA

Peptide Sequence

PEP ID

Os03t0835400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:35100372:35103525:1 gene:Os03g0835400 transcript:Os03t0835400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETFA description:Similar to Uvs101. (Os03t0835400-01)
Sequence

MAAMVVGALRRGTATAGGSSRSFARSLPRPVSTLVVAEHEGGFVKPSSLSALAAAEAIGK
DDNRVSLLLGGSGPGLHKAAEHAASSHPLVSEVLVADSDVFAHPLAEPWAELLRSVQHKG
GYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTSISEPRVFVRPIYAGNALCTVRYTGED
PCMMSIRSTSFSPTEAMSEAKVAPITQVDLSFLSEGSSGKSAWVNLKSQDTERPDLANAP
VVVTGGRGLKSAENFKVLEQLAEKLGAAVGATRAAVDAGFVPNELQVGQTGKIVAPELYM
AFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGIVADLFEVLDELLKKLPDKK

Transcript Sequence

Transcript ID

Os03t0835400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:35100372:35103525:1 gene:Os03g0835400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETFA description:Similar to Uvs101. (Os03t0835400-01)
Sequence

GATGCAACACTGACGTGGCCATCAATTTGATCCCGTCACGTCTCCGCCCTCTTCTCCTCG
CTTCTTCTCGCCGCCGCGCCCGCGCGCTGCTGCTCTTCGCTTCTTCTCGGCTTCCCTCCG
ATCTGAGAGAGCAAGCATAGCAGGAGATCGGGAGACCTGTGTTGCGCGCCATGGCGGCGA
TGGTGGTGGGAGCGTTGAGGAGGGGAACGGCCACCGCCGGGGGGAGCTCGCGGTCCTTCG
CCCGATCGCTCCCTAGACCTGTGAGCACGCTGGTCGTAGCGGAGCACGAAGGTGGGTTCG
TGAAGCCCTCATCTCTGAGCGCATTGGCGGCCGCAGAAGCAATCGGCAAGGATGATAATA
GGGTTTCTCTTCTGTTGGGCGGATCCGGGCCGGGGCTTCACAAGGCTGCCGAGCATGCTG
CGTCCAGCCATCCATTGGTATCCGAGGTTCTTGTTGCTGATTCAGATGTCTTTGCGCATC
CATTGGCTGAGCCTTGGGCCGAGCTACTTCGTTCTGTTCAGCACAAAGGTGGATACTCAC
ATGTTATAGCGTCATCAACCTCGTTCGGGAAGAATTTGCTTCCACGTGCTGCTGCCCTTC
TTGATGTGTCCCCTGTTACGGATGTCACTTCAATATCTGAGCCACGAGTCTTTGTGAGGC
CCATTTATGCTGGAAATGCGCTTTGTACTGTGCGATATACTGGAGAGGATCCATGTATGA
TGAGCATTAGGTCAACATCATTTTCCCCAACTGAGGCTATGTCAGAAGCAAAAGTTGCAC
CTATCACCCAGGTTGATCTCTCTTTCCTCAGTGAAGGAAGCTCTGGGAAATCTGCATGGG
TGAATCTGAAATCCCAAGATACAGAACGGCCCGATCTTGCAAATGCACCCGTAGTAGTAA
CTGGAGGCAGAGGTTTAAAAAGTGCTGAGAATTTCAAAGTATTGGAGCAGCTTGCTGAGA
AACTTGGAGCAGCAGTGGGTGCGACCAGAGCTGCCGTAGATGCAGGATTTGTTCCCAATG
AACTTCAGGTTGGTCAGACTGGGAAAATAGTTGCGCCTGAGCTCTATATGGCATTTGGAG
TATCCGGAGCAATACAACACTTGGCAGGAATGAGAGATTCCAAGGTTATCGTGGCTGTCA
ACAAAGATGCAGATGCTCCCATATTTCAGGTTGCGGACTATGGCATTGTTGCTGATCTAT
TCGAAGTTCTTGACGAACTGTTAAAGAAGCTACCTGACAAGAAATGAGCGTGCTAACATG
ATGATCCGTGTCCATGTCATATTTGTTCTAGTGTTCTTAATAATATGAAGCGCCCTTGTA
ATGTGATTCTGCAAAAATAAGTGTCATTTCATATGATCACACAAGCAC