Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0833300-04
CDS Infomation	cds chromosome:IRGSP-1.0:3:35008307:35015048:-1 gene:Os03g0833300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 6 description:Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-01);Similar to Squamosa-promoter binding-like protein 8. (Os03t0833300-02);Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-03);Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-04)
Sequence	GAGGCGAGCGGCTTGGCGCTGAACAGCTCGCCGTCTTCCTCCGAGGAAGCCGGGGCCGCG TCGGTGAGAAATGTTAATGCTAGAGGTGACTCCGATAAGAGGAAGCGGGTGGTGGTCATT GATGATGATGATGTGGAGGATGACGAGCTGGTGGAGAACGGCGGCGGGTCACTGAGCTTG AGAATTGGGGGTGATGCTGTTGCCCATGGAGCAGGGGTGGGTGGTGGTGCTGATGAGGAA GACAGGAATGGCAAAAAGATCAGGGTGCAGGGAGGCAGTCCTAGTGGCCCCGCGTGCCAG GTGGAGGGCTGCACTGCGGACCTTACTGGTGTGAGGGATTACCATCGACGACACAAGGTC TGCGAGATGCATGCCAAGGCTACCACTGCTGTGGTTGGGAACACTGTCCAGCGGTTCTGC CAACAATGTAGTAGATTCCACCCTCTTCAAGAATTTGATGAAGGGAAGCGAAGTTGCCGC CGACGTTTAGCAGGCCACAACAGACGAAGGAGGAAGACCCGCCCTGAAGTTGCTGTTGGT GGTTCTGCATTTACTGAGGACAAAATTAGCAGTTATTTATTGTTGGGTCTCCTTGGAGTA TGCGCCAATTTGAATGCTGACAATGCTGAGCATTTAAGAGGTCAGGAGTTGATATCTGGT CTTTTGAGAAACCTGGGGGCAGTTGCCAAATCATTGGATCCAAAAGAACTCTGTAAACTC TTGGAGGCATGCCAAAGCATGCAAGATGGATCAAATGCTGGGACCTCTGAAACAGCTAAT GCTTTGGTAAATACTGCTGTAGCAGAGGCTGCAGGGCCATCTAACTCTAAGATGCCTTTT GTGAACGGTGATCAATGTGGCCTGGCATCATCATCTGTTGTACCAGTACAATCAAAGTCT CCCACTGTTGCAACTCCTGACCCTCCAGCATGCAAATTTAAAGATTTTGATTTGAATGAC ACTTATGGTGGCATGGAAGGTTTCGAGGATGGGTATGAAGGTTCACCTACACCAGCTTTC AAGACAACTGATTCTCCCAATTGTCCATCATGGATGCACCAAGATTCTACTCAAAGCCCA CCACAGACTAGTGGCAATTCAGATTCAACATCAGCTCAGTCACTGTCAAGCTCAAATGGA GATGCTCAGTGTCGGACTGATAAAATTGTCTTCAAGCTTTTCGAGAAAGTTCCTAGTGAT TTACCTCCAGTTTTGCGATCACAGATTCTTGGTTGGTTGTCCAGTAGCCCTACTGATATA GAGAGCTATATTAGACCTGGTTGTATTATTTTAACAGTATATCTTCGCTTAGTTGAGTCT GCATGGAAAGAGCTCTCTGATAATATGAGCTCATACCTGGATAAGCTTCTGAATAGTTCC ACCGGCAACTTTTGGGCATCTGGTTTGGTATTTGTAATGGTACGGCATCAGATAGCTTTC ATGCATAATGGTCAACTTATGTTGGACAGACCACTTGCAAACAGTGCTCATCATTACTGC AAGATTTTATGTGTGAGACCAATTGCTGCTCCTTTTTCAACAAAAGTGAATTTCAGGGTA GAAGGCTTGAACCTAGTCAGTGATTCCTCAAGGCTAATTTGCTCATTTGAAGGGAGTTGT ATATTCCAGGAAGACACCGATAATATAGTTGATGACGTTGAGCATGATGATATTGAATAT CTGAACTTCTGTTGTCCTCTCCCTAGTTCAAGAGGGAGAGGATTTGTGGAGGTTGAAGAT GGTGGATTTAGCAACGGCTTCTTCCCTTTCATAATTGCTGAGCAGGACATATGCTCTGAG GTCTGTGAGCTGGAGAGCATATTTGAGTCCTCCAGTCATGAACAGGCAGATGATGACAAT GCCAGGAACCAAGCTTTAGAGTTTCTAAATGAGCTGGGCTGGCTTCTTCATAGAGCAAAC ATAATATCTAAACAGGATAAGGTTCCTCTAGCATCCTTTAACATATGGAGATTCAGAAAT CTTGGTATATTTGCCATGGAGCGGGAATGGTGTGCTGTGACCAAACTGCTGTTAGATTTC TTATTTACTGGACTCGTTGATATCGGGTCCCAGTCTCCAGAAGAGGTGGTGTTGTCAGAA AATCTGCTACATGCTGCCGTGCGGATGAAATCTGCCCAAATGGTTAGGTTTCTGCTGGGA TACAAGCCAAATGAAAGCCTGAAGAGAACTGCAGAGACATTCCTATTCAGACCTGATGCT CAAGGCCCTTCCAAATTTACCCCCCTCCATATAGCAGCTGCCACAGATGATGCAGAGGAT GTATTGGATGCACTTACTAATGATCCTGGACTGGTTGGGATCAACACGTGGAGAAACGCG CGAGACGGCGCAGGCTTCACCCCAGAAGACTACGCTCGCCAGAGGGGCAACGATGCTTAC CTGAATATGGTCGAGAAGAAGATCAATAAGCATCTTGGCAAAGGCCATGTTGTCCTCGGC GTCCCTAGCAGCATACACCCTGTAATAACCGATGGTGTGAAGCCTGGTGAAGTCAGCCTG GAGATCGGCATGACCGTGCCGCCGCCAGCACCGAGCTGCAACGCCTGCAGCCGTCAGGCC CTGATGTACCCCAACTCGACGGCGAGGACCTTCCTGTACAGGCCAGCGATGCTGACCGTG ATGGGCATCGCCGTCATCTGCGTCTGCGTCGGCCTGCTACTCCACACCTGTCCAAAGGTT TATGCAGCTCCTACATTCAGATGGGAGCTGTTAGAACGTGGACCAATGTGA

Peptide Sequence

PEP ID	Os03t0833300-04
PEP Infomation	pep chromosome:IRGSP-1.0:3:35008307:35015048:-1 gene:Os03g0833300 transcript:Os03t0833300-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 6 description:Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-01);Similar to Squamosa-promoter binding-like protein 8. (Os03t0833300-02);Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-03);Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-04)
Sequence	EASGLALNSSPSSSEEAGAASVRNVNARGDSDKRKRVVVIDDDDVEDDELVENGGGSLSL RIGGDAVAHGAGVGGGADEEDRNGKKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKV CEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSCRRRLAGHNRRRRKTRPEVAVG GSAFTEDKISSYLLLGLLGVCANLNADNAEHLRGQELISGLLRNLGAVAKSLDPKELCKL LEACQSMQDGSNAGTSETANALVNTAVAEAAGPSNSKMPFVNGDQCGLASSSVVPVQSKS PTVATPDPPACKFKDFDLNDTYGGMEGFEDGYEGSPTPAFKTTDSPNCPSWMHQDSTQSP PQTSGNSDSTSAQSLSSSNGDAQCRTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDI ESYIRPGCIILTVYLRLVESAWKELSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQIAF MHNGQLMLDRPLANSAHHYCKILCVRPIAAPFSTKVNFRVEGLNLVSDSSRLICSFEGSC IFQEDTDNIVDDVEHDDIEYLNFCCPLPSSRGRGFVEVEDGGFSNGFFPFIIAEQDICSE VCELESIFESSSHEQADDDNARNQALEFLNELGWLLHRANIISKQDKVPLASFNIWRFRN LGIFAMEREWCAVTKLLLDFLFTGLVDIGSQSPEEVVLSENLLHAAVRMKSAQMVRFLLG YKPNESLKRTAETFLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNA RDGAGFTPEDYARQRGNDAYLNMVEKKINKHLGKGHVVLGVPSSIHPVITDGVKPGEVSL EIGMTVPPPAPSCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVICVCVGLLLHTCPKV YAAPTFRWELLERGPM

Transcript Sequence

Transcript ID	Os03t0833300-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:35008307:35015048:-1 gene:Os03g0833300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 6 description:Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-01);Similar to Squamosa-promoter binding-like protein 8. (Os03t0833300-02);Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-03);Similar to Squamosa promoter-binding-like protein 6. (Os03t0833300-04)
Sequence	CGGAGGCGAGCGGCTTGGCGCTGAACAGCTCGCCGTCTTCCTCCGAGGAAGCCGGGGCCG CGTCGGTGAGAAATGTTAATGCTAGAGGTGACTCCGATAAGAGGAAGCGGGTGGTGGTCA TTGATGATGATGATGTGGAGGATGACGAGCTGGTGGAGAACGGCGGCGGGTCACTGAGCT TGAGAATTGGGGGTGATGCTGTTGCCCATGGAGCAGGGGTGGGTGGTGGTGCTGATGAGG AAGACAGGAATGGCAAAAAGATCAGGGTGCAGGGAGGCAGTCCTAGTGGCCCCGCGTGCC AGGTGGAGGGCTGCACTGCGGACCTTACTGGTGTGAGGGATTACCATCGACGACACAAGG TCTGCGAGATGCATGCCAAGGCTACCACTGCTGTGGTTGGGAACACTGTCCAGCGGTTCT GCCAACAATGTAGTAGATTCCACCCTCTTCAAGAATTTGATGAAGGGAAGCGAAGTTGCC GCCGACGTTTAGCAGGCCACAACAGACGAAGGAGGAAGACCCGCCCTGAAGTTGCTGTTG GTGGTTCTGCATTTACTGAGGACAAAATTAGCAGTTATTTATTGTTGGGTCTCCTTGGAG TATGCGCCAATTTGAATGCTGACAATGCTGAGCATTTAAGAGGTCAGGAGTTGATATCTG GTCTTTTGAGAAACCTGGGGGCAGTTGCCAAATCATTGGATCCAAAAGAACTCTGTAAAC TCTTGGAGGCATGCCAAAGCATGCAAGATGGATCAAATGCTGGGACCTCTGAAACAGCTA ATGCTTTGGTAAATACTGCTGTAGCAGAGGCTGCAGGGCCATCTAACTCTAAGATGCCTT TTGTGAACGGTGATCAATGTGGCCTGGCATCATCATCTGTTGTACCAGTACAATCAAAGT CTCCCACTGTTGCAACTCCTGACCCTCCAGCATGCAAATTTAAAGATTTTGATTTGAATG ACACTTATGGTGGCATGGAAGGTTTCGAGGATGGGTATGAAGGTTCACCTACACCAGCTT TCAAGACAACTGATTCTCCCAATTGTCCATCATGGATGCACCAAGATTCTACTCAAAGCC CACCACAGACTAGTGGCAATTCAGATTCAACATCAGCTCAGTCACTGTCAAGCTCAAATG GAGATGCTCAGTGTCGGACTGATAAAATTGTCTTCAAGCTTTTCGAGAAAGTTCCTAGTG ATTTACCTCCAGTTTTGCGATCACAGATTCTTGGTTGGTTGTCCAGTAGCCCTACTGATA TAGAGAGCTATATTAGACCTGGTTGTATTATTTTAACAGTATATCTTCGCTTAGTTGAGT CTGCATGGAAAGAGCTCTCTGATAATATGAGCTCATACCTGGATAAGCTTCTGAATAGTT CCACCGGCAACTTTTGGGCATCTGGTTTGGTATTTGTAATGGTACGGCATCAGATAGCTT TCATGCATAATGGTCAACTTATGTTGGACAGACCACTTGCAAACAGTGCTCATCATTACT GCAAGATTTTATGTGTGAGACCAATTGCTGCTCCTTTTTCAACAAAAGTGAATTTCAGGG TAGAAGGCTTGAACCTAGTCAGTGATTCCTCAAGGCTAATTTGCTCATTTGAAGGGAGTT GTATATTCCAGGAAGACACCGATAATATAGTTGATGACGTTGAGCATGATGATATTGAAT ATCTGAACTTCTGTTGTCCTCTCCCTAGTTCAAGAGGGAGAGGATTTGTGGAGGTTGAAG ATGGTGGATTTAGCAACGGCTTCTTCCCTTTCATAATTGCTGAGCAGGACATATGCTCTG AGGTCTGTGAGCTGGAGAGCATATTTGAGTCCTCCAGTCATGAACAGGCAGATGATGACA ATGCCAGGAACCAAGCTTTAGAGTTTCTAAATGAGCTGGGCTGGCTTCTTCATAGAGCAA ACATAATATCTAAACAGGATAAGGTTCCTCTAGCATCCTTTAACATATGGAGATTCAGAA ATCTTGGTATATTTGCCATGGAGCGGGAATGGTGTGCTGTGACCAAACTGCTGTTAGATT TCTTATTTACTGGACTCGTTGATATCGGGTCCCAGTCTCCAGAAGAGGTGGTGTTGTCAG AAAATCTGCTACATGCTGCCGTGCGGATGAAATCTGCCCAAATGGTTAGGTTTCTGCTGG GATACAAGCCAAATGAAAGCCTGAAGAGAACTGCAGAGACATTCCTATTCAGACCTGATG CTCAAGGCCCTTCCAAATTTACCCCCCTCCATATAGCAGCTGCCACAGATGATGCAGAGG ATGTATTGGATGCACTTACTAATGATCCTGGACTGGTTGGGATCAACACGTGGAGAAACG CGCGAGACGGCGCAGGCTTCACCCCAGAAGACTACGCTCGCCAGAGGGGCAACGATGCTT ACCTGAATATGGTCGAGAAGAAGATCAATAAGCATCTTGGCAAAGGCCATGTTGTCCTCG GCGTCCCTAGCAGCATACACCCTGTAATAACCGATGGTGTGAAGCCTGGTGAAGTCAGCC TGGAGATCGGCATGACCGTGCCGCCGCCAGCACCGAGCTGCAACGCCTGCAGCCGTCAGG CCCTGATGTACCCCAACTCGACGGCGAGGACCTTCCTGTACAGGCCAGCGATGCTGACCG TGATGGGCATCGCCGTCATCTGCGTCTGCGTCGGCCTGCTACTCCACACCTGTCCAAAGG TTTATGCAGCTCCTACATTCAGATGGGAGCTGTTAGAACGTGGACCAATGTGAGGAGGAG CTTAGAATGGAATAAGTGTAGTTGTGTTTTACGTAAGTCGAGAGCTTAGTGTGCTGGCTA AGATCAAAATAACAGTACTATGTGAGGAGGATGATCCTTTGTATTTAAAGCAGGATCGTT TCGTTTATATAAAAGCTTACATACCGTCATTATTAATTATTATTGATTAGTTATTATT