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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0832300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:34957024:34959386:-1 gene:Os03g0832300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to huntingtin interacting protein K. (Os03t0832300-01)
Sequence

ATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGCGGCGGCGGCGGCGGGC
GGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCAAGGACCTGCAGCAGCAGAGCAAGGCG
CTGGACAAGCTCACCGACCGCGTCGAGGACCGCCAGCTCGATTCCTCCCGCGTCCAATCC
GCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGCCATGAGATTGAGGGAA
AAAGAATTAGCTGCCATCAAGATCAACCCTGCTGATGTTGAAATTATCGCTAACGAGCTT
GAGTTGGACAAGAAGATTGCAGAGAGAACACTACGGGAGCACAAAGGCGATGCTGTAGCT
GCAGTCCGGTTCTTGCTTCGCTGA

Peptide Sequence

PEP ID

Os03t0832300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:34957024:34959386:-1 gene:Os03g0832300 transcript:Os03t0832300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to huntingtin interacting protein K. (Os03t0832300-01)
Sequence

MAAAGDESAAAAAAAAAAAGGAAAGEAAVDSKDLQQQSKALDKLTDRVEDRQLDSSRVQS
AMAALASSKEADWNAMRLREKELAAIKINPADVEIIANELELDKKIAERTLREHKGDAVA
AVRFLLR

Transcript Sequence

Transcript ID

Os03t0832300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34957024:34959386:-1 gene:Os03g0832300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to huntingtin interacting protein K. (Os03t0832300-01)
Sequence

AGATCTTCTCCTCCGTTGGATTGCGCACGGCAGAAGGGAATTTCTAGGGTTTAGGCAGCG
AGCGTGGTGGGGAGCGATGGCTGCGGCGGGCGACGAGTCGGCGGCTGCCGCTGCGGCTGC
GGCGGCGGCGGCGGGCGGTGCCGCCGCGGGGGAGGCGGCGGTTGACTCCAAGGACCTGCA
GCAGCAGAGCAAGGCGCTGGACAAGCTCACCGACCGCGTCGAGGACCGCCAGCTCGATTC
CTCCCGCGTCCAATCCGCTATGGCAGCTCTTGCTTCTTCCAAAGAAGCTGATTGGAATGC
CATGAGATTGAGGGAAAAAGAATTAGCTGCCATCAAGATCAACCCTGCTGATGTTGAAAT
TATCGCTAACGAGCTTGAGTTGGACAAGAAGATTGCAGAGAGAACACTACGGGAGCACAA
AGGCGATGCTGTAGCTGCAGTCCGGTTCTTGCTTCGCTGATTCTTACACATTTTGCAAGA
TCTATACACCATATGAAGCAGCTGTAGTTTGCTATTGCTTGCTGCTGAGAGGAATTTCTG
TATCCACAATGAAACGATCATATTTGGCATCTATGTAGAACTTTTTTTCCATGATGTTGC
AAACTGGTCTCTGTTGTCTTCTTGTAAAACTTGGTTCACTCAGGAGTTTATTGCCGTTTA
TCCAAGGTCTTTCTATACCTTCTC