Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0831800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:34939314:34941365:1 gene:Os03g0831800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-95 description:Similar to Sec13p. (Os03t0831800-01)
Sequence

ATGTCGTCAAACAAGATAGAGCTTGACCACAAGGACATGGTCCATGATTCTGCCATCGAC
TACTACGGGAAGAGCCTTGCCACAGCCTCCTCAGACTCCACCGTGCAGATCAGCAGCATT
GGAGGTGCATCCGCGCCATCCCAGCTGCTTGCAACCCTCAGCGGACACTATGGACCTGTG
TGGCGTGTTGCATGGGCCCATCCCAAGTTTGGTTCGATTCTTGCATCCTGCGGCTACGAT
GGCCGTGTCGTAGTTTGGAAGGAGGGTGCAGCTGGGCAATGGTCTCAGGCTCACGTATTC
GACAACCACAAGTCTTCACTCAACTCCATTGCTTGGGCTCCGTATGAGCTTGGCCTTTGC
CTTGCCTGTGGCTCTTCCGACGGGAGCATCTCTGTCATGACCATGCGCCCGGATGGAGGA
TGGGACTCCACAACAATTGAGCAAGCACACCCTGTTGGGGTGATGGCAGTCTCATGGGCT
CCAGCAACCGCACTCGGTTCCATTGTTGGCTCAGGGGAACTTGTCCAGAAGCTCGTCTCT
GGTGGCTTCGACTGTGTTGTCAAGGTGTGGGCTTTTGTCAATGGCAGCTGGAAGCTGGAT
AGCGTTCTGCCCTCCGACATGCACACGGACTGCGTTAGAGATGTATCCTGGGCACCTGTT
TTGGGCCTCGCAAAGTTTACAATCGCCAGTGCCTCTGAAGACGGTAAGGTTGTCATCTGG
ACCAAGGGGAAAGAGGGCGACAAATGGGAAGGGAAGGTGATGCATGACTTCGAGGCTCCG
GCATGGAGGGTGTCCTGGTCACTGACCGGAAACATACTGTCCGTGGCGGCCGGCTCCGGC
GATATCACACTGTGGAAGGAGGCATCAGATGGTCAGTGGGAGAAGGTGACCAAGGTGGAG
CCATAG

Peptide Sequence

PEP ID

Os03t0831800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:34939314:34941365:1 gene:Os03g0831800 transcript:Os03t0831800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-95 description:Similar to Sec13p. (Os03t0831800-01)
Sequence

MSSNKIELDHKDMVHDSAIDYYGKSLATASSDSTVQISSIGGASAPSQLLATLSGHYGPV
WRVAWAHPKFGSILASCGYDGRVVVWKEGAAGQWSQAHVFDNHKSSLNSIAWAPYELGLC
LACGSSDGSISVMTMRPDGGWDSTTIEQAHPVGVMAVSWAPATALGSIVGSGELVQKLVS
GGFDCVVKVWAFVNGSWKLDSVLPSDMHTDCVRDVSWAPVLGLAKFTIASASEDGKVVIW
TKGKEGDKWEGKVMHDFEAPAWRVSWSLTGNILSVAAGSGDITLWKEASDGQWEKVTKVE
P

Transcript Sequence

Transcript ID

Os03t0831800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34939314:34941365:1 gene:Os03g0831800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-95 description:Similar to Sec13p. (Os03t0831800-01)
Sequence

CCCATCTCGTCGTCTCCTCCGCTCCTTGAGCCATCTCGCGGCCGAACAGGGGAGGGGGCG
CCGATCTCCATCTGGCGAGAAGAGCAGGGGAGGGGATCCTGGTGAGGACTACAAAGGAGG
GATTCAAGTTTGAGTCTGGATTAAGTTGGCAGCATGTCGTCAAACAAGATAGAGCTTGAC
CACAAGGACATGGTCCATGATTCTGCCATCGACTACTACGGGAAGAGCCTTGCCACAGCC
TCCTCAGACTCCACCGTGCAGATCAGCAGCATTGGAGGTGCATCCGCGCCATCCCAGCTG
CTTGCAACCCTCAGCGGACACTATGGACCTGTGTGGCGTGTTGCATGGGCCCATCCCAAG
TTTGGTTCGATTCTTGCATCCTGCGGCTACGATGGCCGTGTCGTAGTTTGGAAGGAGGGT
GCAGCTGGGCAATGGTCTCAGGCTCACGTATTCGACAACCACAAGTCTTCACTCAACTCC
ATTGCTTGGGCTCCGTATGAGCTTGGCCTTTGCCTTGCCTGTGGCTCTTCCGACGGGAGC
ATCTCTGTCATGACCATGCGCCCGGATGGAGGATGGGACTCCACAACAATTGAGCAAGCA
CACCCTGTTGGGGTGATGGCAGTCTCATGGGCTCCAGCAACCGCACTCGGTTCCATTGTT
GGCTCAGGGGAACTTGTCCAGAAGCTCGTCTCTGGTGGCTTCGACTGTGTTGTCAAGGTG
TGGGCTTTTGTCAATGGCAGCTGGAAGCTGGATAGCGTTCTGCCCTCCGACATGCACACG
GACTGCGTTAGAGATGTATCCTGGGCACCTGTTTTGGGCCTCGCAAAGTTTACAATCGCC
AGTGCCTCTGAAGACGGTAAGGTTGTCATCTGGACCAAGGGGAAAGAGGGCGACAAATGG
GAAGGGAAGGTGATGCATGACTTCGAGGCTCCGGCATGGAGGGTGTCCTGGTCACTGACC
GGAAACATACTGTCCGTGGCGGCCGGCTCCGGCGATATCACACTGTGGAAGGAGGCATCA
GATGGTCAGTGGGAGAAGGTGACCAAGGTGGAGCCATAGGAAGCCTCGGCTGTGGCCTGC
AGTTTGCATCTCATATCAGATTCAGTCAGATACATGTTTCTAGTAGCAATGGAATCCACG
AGTGTACTGATAGATACTCAAATTCTCACTTGTTATCATCATCATCTTTGGATGGATGTT
GTTCTTACCTGAACAGAGTTGTGCTGTGTCTGTTTAGACCTGTAATTTACTGGTGCAATG
GTGGTTTCTTAGTACTGTCAAATGAGACATCAGACATCTATGAGACGATTATAGTCTAGT
TTCTTCCTTGCGCTTTGACATAGTTGAATAAAGCAATTTCTTATCCC