Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0831500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:34923939:34926673:-1 gene:Os03g0831500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5). (Os03t0831500-01)
Sequence	ATGGCCGCCGCCGCCGACCGCCTCCTCCACCTCCTCCGCGCCGCGCCTGCTTCCCCGGCC CCCGCCGCCGTCCCGTCGTCCCGCACCCGAGCCACCTTCTACCACCAGCCGCGGAGCCTC CGCCTGGCGGCAGGGGCATCCGGTATGCGCCGCGTTGCCGTGGCCTGCAGCTCCGCGGGC GCGGGCGGGAGCGGGGTCGAGGGCGATGAGGAGGGGATGACGTACAAGGGCGCCGGCGTG GATATCGACGCCGGGACGGAGCTCGTCCGCCGCATCGGCAGGTTGGCTCCAGCGATAGGC GGCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTGTTGCTGGAACCGATGGAGTC GGGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGACACAATTGGGATTGATCTG GTGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCTTCCTAGAC TACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGGGGATTGTC GATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAATGCCTGAT TTCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGTGGGTGCTGTTAAGAAGGAT AAGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTCCTTCTAGT GGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCG TTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATG GCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAA GGAATAGCCCATATTACTGGTGGTGGCTTCACCGATAATATCCCAAGAGTATTTCCTTCT GGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATT CAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGA ATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCG AACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGA

Peptide Sequence

PEP ID	Os03t0831500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:34923939:34926673:-1 gene:Os03g0831500 transcript:Os03t0831500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5). (Os03t0831500-01)
Sequence	MAAAADRLLHLLRAAPASPAPAAVPSSRTRATFYHQPRSLRLAAGASGMRRVAVACSSAG AGGSGVEGDEEGMTYKGAGVDIDAGTELVRRIGRLAPAIGGFGGLFPFGDQFLVAGTDGV GTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYYATSKLDVDLAEKVIKGIV DGCRQSDCALLGGETAEMPDFYKEGEYDLSGFAVGAVKKDKVIDGKNIMEGDIIIGLPSS GVHSNGFSLARRVLEKSGLSLNDQLPRNDGMITTVGEALMAPTVIYVKQVLEIINKGGVK GIAHITGGGFTDNIPRVFPSGLGAKIFTAAWEVPPVFRWIQEVGKIEDAEMRRTFNMGIG MVLVVSKEAADGILEGTHGPNHAYRIGEVISGEGVHYV

Transcript Sequence

Transcript ID	Os03t0831500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34923939:34926673:-1 gene:Os03g0831500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5). (Os03t0831500-01)
Sequence	GGCCGCCGCTCGCGTCCCATCTCTCCCTCTCTCCTCCCACCCATGGCCGCCGCCGCCGAC CGCCTCCTCCACCTCCTCCGCGCCGCGCCTGCTTCCCCGGCCCCCGCCGCCGTCCCGTCG TCCCGCACCCGAGCCACCTTCTACCACCAGCCGCGGAGCCTCCGCCTGGCGGCAGGGGCA TCCGGTATGCGCCGCGTTGCCGTGGCCTGCAGCTCCGCGGGCGCGGGCGGGAGCGGGGTC GAGGGCGATGAGGAGGGGATGACGTACAAGGGCGCCGGCGTGGATATCGACGCCGGGACG GAGCTCGTCCGCCGCATCGGCAGGTTGGCTCCAGCGATAGGCGGCTTCGGTGGCCTCTTC CCCTTCGGTGACCAATTTCTTGTTGCTGGAACCGATGGAGTCGGGACGAAGCTCAAGCTT GCGTTTGAAACTGGTATCCATGACACAATTGGGATTGATCTGGTGGCTATGAGTGTTAAT GACATTGTGACTTCGGGTGCAAAACCACTGTTCTTCCTAGACTACTATGCTACGAGCAAG CTCGACGTTGATCTAGCAGAGAAGGTTATCAAGGGGATTGTCGATGGATGCCGGCAATCA GATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAATGCCTGATTTCTATAAAGAAGGTGAA TATGATCTAAGTGGCTTTGCTGTGGGTGCTGTTAAGAAGGATAAGGTCATCGATGGTAAA AATATCATGGAGGGAGATATCATCATTGGTCTTCCTTCTAGTGGGGTTCATTCTAACGGG TTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGTTGAATGACCAGCTCCCC AGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTAT GTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAGGAATAGCCCATATTACT GGTGGTGGCTTCACCGATAATATCCCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATT TTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATT GAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGC AAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATT GGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAA TGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTGTAATC GCATAACATAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGA AAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCCAAACGGCAGAACCT ATTATTTGGACTTGCATCT