Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0830900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:34896339:34900928:-1 gene:Os03g0830900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os03t0830900-01)
Sequence	ATGCCCGCCGCCGTCGCCGCCGCGGGGGCGGCGGCAGCCTCGGGCACCGCGCTGCTCGCC TACATACTCCTCGCATGCTGCCGGCCGCAGCCGGCGCCGGAGGCCGGCGAGGAGGAGGAG GAGGAGTCGCGGCTGTTGTCGTCCGGGGCGGAGGCGCGGGGGAGGGAGGCGGGGGATGGC GGCGAGGAGGAGGAGGAGTGGCCGTACAGGCCGCCGTCAACGTGCTGCGAGGCGGCGGCG GTGGCCGCGCGCACGGCGCGGCGCACGTGGGACCTCACCGTCGGGCGCTGGGGCCTCCAC GGCATCGCCTTCGGGATCAAGCGCCACATGAAGCGCCAGGGTGATTTGCAGCATGAGTAT AGTGGAAATGATTGCCTTCAACTAAAAGGTCACGACGCACACACTGAAGTAGCTTATCTA CTTGAGCACTTGAAGATTTGCATGTTCTACTCAAAGAAAACATTTTCAGCGTTTCTTCAG TTTGGTGGGTACAATCAAGAAGACATTCTTATTCACAAGGCTAGGGCGAGGCTTATGCAA CCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAAGTGCTTTCTGCTTTTCATTCGGGGT GCTATCAGTACTAAGGAGCGCCTAACAGCCGCAACTGCTGCTGAGGTTCCTTTTCACCAT ATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGTTTTAGGATATGCACATTGTGGGATG CTTGCTGCAGCTCGTTGGATTGCTAACCTTGCCAAGCCCCATCTTCACAAGGCAGTACAA GAATTCCCTGATTATCAAATAAAGGTCATTGGGCATTCAATGGGAGCAGGTATCGGAGCA ATTCTGACATACATTCTTCATGAGCATCATGAGTTCTCATCGTGCACGTGTCTGGCATTT GCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGAGTCGGGCAAAGAATTTGTCACTTCT CTCATCAACAGAAATGATGTGGTCCCGGCCTTTTCAAAAGTTTCTGCTGAGAACCTGCGA GCTGAGGTAATGGTATCATCAAAGCTAGATGATGAGCAGGATCAAGCTCACTTTAGCTTA TTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAAGTCTCATATGCTGTCAGTATCTCAT CCAACAGAGAAGAACACAGATCCTGATTCTAGCATATCTGAGCCCTTGCTCAAACATGTC CCCGAAATCACGCAGCCTGTAACAAATGGGCTAAGCACAGACTGCAACCAGCATCAAACG GACCTCGTTGCTAATACAGAGCAGGACTTTTCAGCTGTATCAGTTGTTACCTCTGAAGAA AAGATTGTACTATCTAGCAACGATAATGTTATCAGTACAAAGTCTGTTGCTGGATCAGGC TTTGCAGCACAAGGGGATGTGAACATCAATGGATCACTGGACACTGAACAAGAACAATCA TCCTTGACAGGGCAGGAGGAACCAGAATCACTGAAGCAGAACTGTGATATCAAAGACAAG CTGAAAGAACCGCTACCAACCTGCAGTTCGCGCCAGTTTTTCCCTCCTGGAAGAATTATT CACATGGTTGCAATGGCCTCACCTGACCCAAATCCTGGTGAGGGATCCAGCAGCAATGAG ATCATTAGCATTTATGAAACGCCAAGAGATTTGTATGGGAAAATAAGGCTAGCTCCAAAC ATGATAAAGGAGCATTACATGCCTAGTTACATAAGCACAATGGAATCATTATTGGAACAG CTGCTCAAAGACGATAATGTAGATACAATAACAAATGATTTGTAA

Peptide Sequence

PEP ID	Os03t0830900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:34896339:34900928:-1 gene:Os03g0830900 transcript:Os03t0830900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os03t0830900-01)
Sequence	MPAAVAAAGAAAASGTALLAYILLACCRPQPAPEAGEEEEEESRLLSSGAEARGREAGDG GEEEEEWPYRPPSTCCEAAAVAARTARRTWDLTVGRWGLHGIAFGIKRHMKRQGDLQHEY SGNDCLQLKGHDAHTEVAYLLEHLKICMFYSKKTFSAFLQFGGYNQEDILIHKARARLMQ PSFALVCDKKSKCFLLFIRGAISTKERLTAATAAEVPFHHIVLSEGQISNVVLGYAHCGM LAAARWIANLAKPHLHKAVQEFPDYQIKVIGHSMGAGIGAILTYILHEHHEFSSCTCLAF APPACMSWELAESGKEFVTSLINRNDVVPAFSKVSAENLRAEVMVSSKLDDEQDQAHFSL FTAISKRVAFIKSHMLSVSHPTEKNTDPDSSISEPLLKHVPEITQPVTNGLSTDCNQHQT DLVANTEQDFSAVSVVTSEEKIVLSSNDNVISTKSVAGSGFAAQGDVNINGSLDTEQEQS SLTGQEEPESLKQNCDIKDKLKEPLPTCSSRQFFPPGRIIHMVAMASPDPNPGEGSSSNE IISIYETPRDLYGKIRLAPNMIKEHYMPSYISTMESLLEQLLKDDNVDTITNDL

Transcript Sequence

Transcript ID	Os03t0830900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34896339:34900928:-1 gene:Os03g0830900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os03t0830900-01)
Sequence	CTTCTCCACTTCGTCCCACACTTCAACGCCTCGCGATCGATCGCCCCAAATCCCCGCCGC CGCCGCCGCCGCCGCGAATCGCCGGATGCCCGCCGCCGTCGCCGCCGCGGGGGCGGCGGC AGCCTCGGGCACCGCGCTGCTCGCCTACATACTCCTCGCATGCTGCCGGCCGCAGCCGGC GCCGGAGGCCGGCGAGGAGGAGGAGGAGGAGTCGCGGCTGTTGTCGTCCGGGGCGGAGGC GCGGGGGAGGGAGGCGGGGGATGGCGGCGAGGAGGAGGAGGAGTGGCCGTACAGGCCGCC GTCAACGTGCTGCGAGGCGGCGGCGGTGGCCGCGCGCACGGCGCGGCGCACGTGGGACCT CACCGTCGGGCGCTGGGGCCTCCACGGCATCGCCTTCGGGATCAAGCGCCACATGAAGCG CCAGGGTGATTTGCAGCATGAGTATAGTGGAAATGATTGCCTTCAACTAAAAGGTCACGA CGCACACACTGAAGTAGCTTATCTACTTGAGCACTTGAAGATTTGCATGTTCTACTCAAA GAAAACATTTTCAGCGTTTCTTCAGTTTGGTGGGTACAATCAAGAAGACATTCTTATTCA CAAGGCTAGGGCGAGGCTTATGCAACCTTCTTTCGCGCTTGTGTGTGACAAAAAATCCAA GTGCTTTCTGCTTTTCATTCGGGGTGCTATCAGTACTAAGGAGCGCCTAACAGCCGCAAC TGCTGCTGAGGTTCCTTTTCACCATATAGTTTTAAGTGAAGGACAAATCAGCAACGTGGT TTTAGGATATGCACATTGTGGGATGCTTGCTGCAGCTCGTTGGATTGCTAACCTTGCCAA GCCCCATCTTCACAAGGCAGTACAAGAATTCCCTGATTATCAAATAAAGGTCATTGGGCA TTCAATGGGAGCAGGTATCGGAGCAATTCTGACATACATTCTTCATGAGCATCATGAGTT CTCATCGTGCACGTGTCTGGCATTTGCTCCTCCTGCCTGTATGTCATGGGAGCTGGCGGA GTCGGGCAAAGAATTTGTCACTTCTCTCATCAACAGAAATGATGTGGTCCCGGCCTTTTC AAAAGTTTCTGCTGAGAACCTGCGAGCTGAGGTAATGGTATCATCAAAGCTAGATGATGA GCAGGATCAAGCTCACTTTAGCTTATTTACGGCAATAAGTAAGCGTGTAGCTTTCATAAA GTCTCATATGCTGTCAGTATCTCATCCAACAGAGAAGAACACAGATCCTGATTCTAGCAT ATCTGAGCCCTTGCTCAAACATGTCCCCGAAATCACGCAGCCTGTAACAAATGGGCTAAG CACAGACTGCAACCAGCATCAAACGGACCTCGTTGCTAATACAGAGCAGGACTTTTCAGC TGTATCAGTTGTTACCTCTGAAGAAAAGATTGTACTATCTAGCAACGATAATGTTATCAG TACAAAGTCTGTTGCTGGATCAGGCTTTGCAGCACAAGGGGATGTGAACATCAATGGATC ACTGGACACTGAACAAGAACAATCATCCTTGACAGGGCAGGAGGAACCAGAATCACTGAA GCAGAACTGTGATATCAAAGACAAGCTGAAAGAACCGCTACCAACCTGCAGTTCGCGCCA GTTTTTCCCTCCTGGAAGAATTATTCACATGGTTGCAATGGCCTCACCTGACCCAAATCC TGGTGAGGGATCCAGCAGCAATGAGATCATTAGCATTTATGAAACGCCAAGAGATTTGTA TGGGAAAATAAGGCTAGCTCCAAACATGATAAAGGAGCATTACATGCCTAGTTACATAAG CACAATGGAATCATTATTGGAACAGCTGCTCAAAGACGATAATGTAGATACAATAACAAA TGATTTGTAAATTATGTAAAAACTCAATAAATTATTAATCCAATTCTTTGCAAATTGCAT TGTTCT