Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0830600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:34891223:34892049:-1 gene:Os03g0830600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os03t0830600-01)
Sequence

ATGGCGGCGACACGCGGCTCCGTGCGGCTCCTCCTCCTGATCCTCCTCCTCCGCCCCGCC
GCGGCGGGGAGCCCACTGATGATGACGTGCGCCAAGACGCCGCACCCGGACGTGTGCATC
ACCGTGCTGGGCGCCATCCCGGAGTGCAGGAACACCGGCGACCCGCGCGTCCTCGCCGAG
AACGCCGTCCGCTCCGCCGCCACCATCGGCGCGGCGGCGGGCACGTTCGCGCGCGCGGAG
CTCGACATCGTGAAGGACACCGACATGTGGCAGTGCCTGGACGAGTGCGCGCAGGACATC
GAGGAGGCCGTCTCCCACCTCGACGACACCGAGGGCGGCGTCGTCGACCTCGACGCCAAG
TTCAAGGACGTGCGGCTGTTCATGGACGTCGCCGAGAGGGACACGTGGTCGTGCGAGGAG
AGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAAGAACGAGGCG
TTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGGAACGGCCGGC
GAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACCGGATGTCCAG
TTATGA

Peptide Sequence

PEP ID

Os03t0830600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:34891223:34892049:-1 gene:Os03g0830600 transcript:Os03t0830600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os03t0830600-01)
Sequence

MAATRGSVRLLLLILLLRPAAAGSPLMMTCAKTPHPDVCITVLGAIPECRNTGDPRVLAE
NAVRSAATIGAAAGTFARAELDIVKDTDMWQCLDECAQDIEEAVSHLDDTEGGVVDLDAK
FKDVRLFMDVAERDTWSCEESCRDAPDSTVKATLLDKNEAFEKFMRVTGALIEMVIGTAG
EPAPEPSADEHSDELIPDVQL

Transcript Sequence

Transcript ID

Os03t0830600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34891223:34892049:-1 gene:Os03g0830600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os03t0830600-01)
Sequence

ATCGACGACAATGGCGGCGACACGCGGCTCCGTGCGGCTCCTCCTCCTGATCCTCCTCCT
CCGCCCCGCCGCGGCGGGGAGCCCACTGATGATGACGTGCGCCAAGACGCCGCACCCGGA
CGTGTGCATCACCGTGCTGGGCGCCATCCCGGAGTGCAGGAACACCGGCGACCCGCGCGT
CCTCGCCGAGAACGCCGTCCGCTCCGCCGCCACCATCGGCGCGGCGGCGGGCACGTTCGC
GCGCGCGGAGCTCGACATCGTGAAGGACACCGACATGTGGCAGTGCCTGGACGAGTGCGC
GCAGGACATCGAGGAGGCCGTCTCCCACCTCGACGACACCGAGGGCGGCGTCGTCGACCT
CGACGCCAAGTTCAAGGACGTGCGGCTGTTCATGGACGTCGCCGAGAGGGACACGTGGTC
GTGCGAGGAGAGCTGCCGGGACGCGCCGGACTCCACCGTCAAGGCCACCCTGCTCGACAA
GAACGAGGCGTTCGAGAAGTTCATGCGGGTCACCGGCGCGCTCATCGAGATGGTCATCGG
AACGGCCGGCGAGCCGGCGCCGGAGCCGTCAGCTGATGAACACTCGGACGAACTAATACC
GGATGTCCAGTTATGATCAATTCATAATGTACTAATCGCTCATGTGACTTCTCATCTCCA
TTTTTGATCGATCGTGTTCAGGTATTTTGATTAGGTTAATTAAGGGCCCGTTCAATTTGA
CGTCATTTTCAACCATACCATTTTTTTTAAAGTTGTCAAAAAAATGTCTACGTTTAGTTT
GCTACTAAATTTGATAAATATATAAGAAATCCTGCCAAAATTTGGAC