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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0829900-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:34860760:34861520:-1 gene:Os03g0829900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FW2.2-like 4 description:Similar to PGPS/D12. (Os03t0829900-00)
Sequence

ATGGCGAGGCCGCAACACAATGACTGGTCATCCGGACTCTTCGCCTGCTTCAATGACTGC
GAAGTTTGTTGCTTGACGACGGTGTGCCCGTGCATCACGTTCGGGCGGAGCGCGGAGATC
GTGTCGAGGGGGGAGAGGACGTGCTGCGCGGCGGGCGTGATGTGCGTGCTGCTCGGCTTC
TTCGCCCACTGCCACTGCCTCTACTCCTGCTGCTACCGCGGCAAGATGCGCGACAGCTTC
CACCTCCCCGAGGACCCATGCTGCGACTGCTGCGTCCACGCCCTCTGCCTGCAGTGCGCG
CTGTGCCAGGAGTACAGGCACCTCAAGAGCCTCGGCTACAAACCCTCGCTTGGCTGGCTC
GGAAACAACCAGCACGTCCCGCCCAAGCACAACCCGCCGATGCGACGCTAA

Peptide Sequence

PEP ID

Os03t0829900-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:34860760:34861520:-1 gene:Os03g0829900 transcript:Os03t0829900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FW2.2-like 4 description:Similar to PGPS/D12. (Os03t0829900-00)
Sequence

MARPQHNDWSSGLFACFNDCEVCCLTTVCPCITFGRSAEIVSRGERTCCAAGVMCVLLGF
FAHCHCLYSCCYRGKMRDSFHLPEDPCCDCCVHALCLQCALCQEYRHLKSLGYKPSLGWL
GNNQHVPPKHNPPMRR

Transcript Sequence

Transcript ID

Os03t0829900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34860760:34861520:-1 gene:Os03g0829900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FW2.2-like 4 description:Similar to PGPS/D12. (Os03t0829900-00)
Sequence

GCTAAGCTCATGCTCATCGCTCCTAGCTAGCAAGCCTGCCGATCACAACAGCAGCAGCTG
GTCAGTGGTCGCACTAGCGAAGGAGAGGATCGGAGGAGATGGCGAGGCCGCAACACAATG
ACTGGTCATCCGGACTCTTCGCCTGCTTCAATGACTGCGAAGTTTGTTGCTTGACGACGG
TGTGCCCGTGCATCACGTTCGGGCGGAGCGCGGAGATCGTGTCGAGGGGGGAGAGGACGT
GCTGCGCGGCGGGCGTGATGTGCGTGCTGCTCGGCTTCTTCGCCCACTGCCACTGCCTCT
ACTCCTGCTGCTACCGCGGCAAGATGCGCGACAGCTTCCACCTCCCCGAGGACCCATGCT
GCGACTGCTGCGTCCACGCCCTCTGCCTGCAGTGCGCGCTGTGCCAGGAGTACAGGCACC
TCAAGAGCCTCGGCTACAAACCCTCGCTTGGCTGGCTCGGAAACAACCAGCACGTCCCGC
CCAAGCACAACCCGCCGATGCGACGCTAA