Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0828600-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:34805711:34807600:1 gene:Os03g0828600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATCHX19 (CATION/H+ EXCHANGER 19); monovalent cation:proton antiporter/ sodium:hydrogen antiporter. (Os03t0828600-00)
Sequence	ATGGGCGTCGCGCTGTCGATCACCGCGTTCCCCGTCCTCGCGCGCATCCTCGCCGAGCTC AAGCTCCTCACCACCGACATCGGACGCATGGCCATGTCGGCCGCGGCTGTCAACGACATC ACCGCGTGGGTGCTGCTTGCCCTCGCCATCGCGCTCTCGGGATCCGGGTCGCCGCTCGTG TCCATCTACGTCCTGCTCTGCGGCGTCGCGTTCGTCGGCTTCGCCACGGTCGCCGTGCGG CCCGTGCTCGTCTTCATGGCACGGCGGTCGCCGGAGGGCGAGCCGGTGAAAGAATCGTTC GTCTGCGCCATTCTAGTCATCGTTCTCGCCGCCGGCTTCGCCACGGACGCCATCGGCATC CACGCGCTGTTCGGCGCGTTCGTCATCGGCGTGCTCGTCCCCAAGGAAGGCGCCTGCGCC GGCGCGCTGACGGAGAAGGTCGAGGACCTGGTGTCGTCGCTGTTCCTTCCCCTCTACTTC GTGTCGAGCGGTCTGAAGACGGACGTCACCACCATCTCCGGCGCCAAGTCGTGGGGGCTC CTCGTGCTCGTCATGACGACGGCCTGCGCCGGCAAGATCGGCGGCACGGTGGCGGCGTCG CTGCTGATGCGTGTGCCGCTGCGTGAGGCGCTCGCGCTGGGGATGCTGATGAACACCAAG GGGCTCGTGGAGCTCATCGTGCTCAACATCGGACGCGACCGGAAGGTGCTCAACGAGGAG GCCTTCGCCATCCTCGTGCTCATGGCGCTCGTCACCACCTTCATGACCACGCCGGCCGTC ACCGCCGTGTACAAGCCGGCGCGGCGGCAGGCGTCGTACAAGCACCGCACGGTGGAGCGC GCCGACGCCGACAGCGAGCTGCGCGTGCTCGCGTGCTTCCACGCCAGCCGCGGCATCCCG ACGCTGATCAACCTCGTGGAGGCGTCGCGCGGCACGAGGAGGAGCAAGCTCACCATGTAC GCCATGCACCTCGTCGAGCTGTCGGAGCGCTCGTCGGCCATCTCCATGGTGCAGCGCGCG CGCCGCAACGGGCTCCCGTTCGCGAGCCGGCGCGGCCACGAAGGCGGCGGCGGCGGCGGG GAGGTGGTGGTGGCGTTCGAGGCGTTCCAGCGGCTCACCGCCGTGACGGTGAAGCCGATG ACGGCCATCTCCGACCTCGACACCATCCACGACGACATCGTCGCGTCGGCGCTGGACAAG CGATCCGCCATCATCCTGCTCCCGTTCCACAAGATGCTCTGCCATGACGGCACGCTCGAG CCCGTGGACCGGGCGTTCCACCAGGTGAACGTCCGGGTGCTCCGCGACGCGCCATGCTCC GTCGCCGTCCTCGTCGACCGCGCGCTCGGTGGCGCGGCGCAGGTCTCGGCGCCGGACGTC TCCTACTCGGTCCTCCTCCTCTTCTTCGGCGGCGCCGACGACCGCGAGGCGCTCGCGTAC GCCTCACGCATGGGCGAGCACCCTGGCATCGCGCTCACCGTGGCCCGTTTCACGGCCGCC GCCGACGACGCCGCCGAAGACGACGACGCCATACAAAAGCACATCTCCAACGTGCGCAAG GCCGGAAACGACGGAGCGTTCAAGTACGACGAGGTGTCGGCCCATGGCCGGCAAGAAGTG GCGTTCGCCATCAAGACACTGGGTAGAGGCAAGAACCTGGTGGTGGCCGGGCGGTCGGCG GCGGTGGCGACGCCGCTGGTGGACAAGACGGACTGCCCGGAGCTCGGCCACGTCGGGAGC TACCTGGCGACGCCGGAGTTCTCGACGACGTCCTCCGTGCTCGTGGTGCAGAAGTACGAC TCGAGAGGTGACACTGGCACATCGTCGTCGAGCCAAGCCGGAGGAGAGGCGACCGTGGAG GAATCCGGCGTGCCAATCCGCCGGCCATAG

Peptide Sequence

PEP ID	Os03t0828600-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:34805711:34807600:1 gene:Os03g0828600 transcript:Os03t0828600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATCHX19 (CATION/H+ EXCHANGER 19); monovalent cation:proton antiporter/ sodium:hydrogen antiporter. (Os03t0828600-00)
Sequence	MGVALSITAFPVLARILAELKLLTTDIGRMAMSAAAVNDITAWVLLALAIALSGSGSPLV SIYVLLCGVAFVGFATVAVRPVLVFMARRSPEGEPVKESFVCAILVIVLAAGFATDAIGI HALFGAFVIGVLVPKEGACAGALTEKVEDLVSSLFLPLYFVSSGLKTDVTTISGAKSWGL LVLVMTTACAGKIGGTVAASLLMRVPLREALALGMLMNTKGLVELIVLNIGRDRKVLNEE AFAILVLMALVTTFMTTPAVTAVYKPARRQASYKHRTVERADADSELRVLACFHASRGIP TLINLVEASRGTRRSKLTMYAMHLVELSERSSAISMVQRARRNGLPFASRRGHEGGGGGG EVVVAFEAFQRLTAVTVKPMTAISDLDTIHDDIVASALDKRSAIILLPFHKMLCHDGTLE PVDRAFHQVNVRVLRDAPCSVAVLVDRALGGAAQVSAPDVSYSVLLLFFGGADDREALAY ASRMGEHPGIALTVARFTAAADDAAEDDDAIQKHISNVRKAGNDGAFKYDEVSAHGRQEV AFAIKTLGRGKNLVVAGRSAAVATPLVDKTDCPELGHVGSYLATPEFSTTSSVLVVQKYD SRGDTGTSSSSQAGGEATVEESGVPIRRP

Transcript Sequence

Transcript ID	Os03t0828600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34805711:34807600:1 gene:Os03g0828600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATCHX19 (CATION/H+ EXCHANGER 19); monovalent cation:proton antiporter/ sodium:hydrogen antiporter. (Os03t0828600-00)
Sequence	ATGGGCGTCGCGCTGTCGATCACCGCGTTCCCCGTCCTCGCGCGCATCCTCGCCGAGCTC AAGCTCCTCACCACCGACATCGGACGCATGGCCATGTCGGCCGCGGCTGTCAACGACATC ACCGCGTGGGTGCTGCTTGCCCTCGCCATCGCGCTCTCGGGATCCGGGTCGCCGCTCGTG TCCATCTACGTCCTGCTCTGCGGCGTCGCGTTCGTCGGCTTCGCCACGGTCGCCGTGCGG CCCGTGCTCGTCTTCATGGCACGGCGGTCGCCGGAGGGCGAGCCGGTGAAAGAATCGTTC GTCTGCGCCATTCTAGTCATCGTTCTCGCCGCCGGCTTCGCCACGGACGCCATCGGCATC CACGCGCTGTTCGGCGCGTTCGTCATCGGCGTGCTCGTCCCCAAGGAAGGCGCCTGCGCC GGCGCGCTGACGGAGAAGGTCGAGGACCTGGTGTCGTCGCTGTTCCTTCCCCTCTACTTC GTGTCGAGCGGTCTGAAGACGGACGTCACCACCATCTCCGGCGCCAAGTCGTGGGGGCTC CTCGTGCTCGTCATGACGACGGCCTGCGCCGGCAAGATCGGCGGCACGGTGGCGGCGTCG CTGCTGATGCGTGTGCCGCTGCGTGAGGCGCTCGCGCTGGGGATGCTGATGAACACCAAG GGGCTCGTGGAGCTCATCGTGCTCAACATCGGACGCGACCGGAAGGTGCTCAACGAGGAG GCCTTCGCCATCCTCGTGCTCATGGCGCTCGTCACCACCTTCATGACCACGCCGGCCGTC ACCGCCGTGTACAAGCCGGCGCGGCGGCAGGCGTCGTACAAGCACCGCACGGTGGAGCGC GCCGACGCCGACAGCGAGCTGCGCGTGCTCGCGTGCTTCCACGCCAGCCGCGGCATCCCG ACGCTGATCAACCTCGTGGAGGCGTCGCGCGGCACGAGGAGGAGCAAGCTCACCATGTAC GCCATGCACCTCGTCGAGCTGTCGGAGCGCTCGTCGGCCATCTCCATGGTGCAGCGCGCG CGCCGCAACGGGCTCCCGTTCGCGAGCCGGCGCGGCCACGAAGGCGGCGGCGGCGGCGGG GAGGTGGTGGTGGCGTTCGAGGCGTTCCAGCGGCTCACCGCCGTGACGGTGAAGCCGATG ACGGCCATCTCCGACCTCGACACCATCCACGACGACATCGTCGCGTCGGCGCTGGACAAG CGATCCGCCATCATCCTGCTCCCGTTCCACAAGATGCTCTGCCATGACGGCACGCTCGAG CCCGTGGACCGGGCGTTCCACCAGGTGAACGTCCGGGTGCTCCGCGACGCGCCATGCTCC GTCGCCGTCCTCGTCGACCGCGCGCTCGGTGGCGCGGCGCAGGTCTCGGCGCCGGACGTC TCCTACTCGGTCCTCCTCCTCTTCTTCGGCGGCGCCGACGACCGCGAGGCGCTCGCGTAC GCCTCACGCATGGGCGAGCACCCTGGCATCGCGCTCACCGTGGCCCGTTTCACGGCCGCC GCCGACGACGCCGCCGAAGACGACGACGCCATACAAAAGCACATCTCCAACGTGCGCAAG GCCGGAAACGACGGAGCGTTCAAGTACGACGAGGTGTCGGCCCATGGCCGGCAAGAAGTG GCGTTCGCCATCAAGACACTGGGTAGAGGCAAGAACCTGGTGGTGGCCGGGCGGTCGGCG GCGGTGGCGACGCCGCTGGTGGACAAGACGGACTGCCCGGAGCTCGGCCACGTCGGGAGC TACCTGGCGACGCCGGAGTTCTCGACGACGTCCTCCGTGCTCGTGGTGCAGAAGTACGAC TCGAGAGGTGACACTGGCACATCGTCGTCGAGCCAAGCCGGAGGAGAGGCGACCGTGGAG GAATCCGGCGTGCCAATCCGCCGGCCATAG