Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0826400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:34712797:34715006:1 gene:Os03g0826400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 25 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0826400-01)
Sequence	ATGAATCCTCTGACGCAGGTGAAGAGGACGCAGGTAATCAACCAGAAGGAAGCGCTTCTG GGCATCGGCGAGGACGGGTCGTGGCACGCCAAGTTCAAGGACTCCGCCTACGTCTTCGTC GGCGGCATCCCCTACGACCTCACCGAGGGCGACCTCCTCGCCGTGTTCGCGCAGTACGGC GAGGTGGTCGATGTGAACCTCGTGCGCGACAAGGGCACCGGAAAATCCAAGGGATTTGCG TTTCTTGCGTACGAGGACCAGAGGAGCACGATTCTTGCTGTTGATAATTTGAATGGAGCT AAAGTTCTTGGGAGGATTGTAAGAGTTGATCATGTGAGCAAATACAAGAAAAAGGAGGAG GAGGATGAGGAGGAGCTGCAGAAGAAGAGGGAGGCCCGTGGCGTGTGCTACGCGTTCCAG AAAGGCGAATGCAACCGTGGAGCTTCCTGCAGATATTCCCATGATGAGCAGAGGAATGCA AACACTGGTTGGGGTTCTAAGGAGGAGAGCAAAGCAAGATGGGAGCATGACAGACACCAT GAGCCACCGATGAGCCACAAGAAGTTCCCTTCGAGTGCTGGGGAACAAAGGTTCCCTGAC AGAGCTAAAGAGGAGAACAAATCAACTGGCAGGGAAGGGCAGTCCTCAAGATCGGAGGCA TACAAAGACCGTGATTCCAGGCTTAGGCATAGTGATAGAGGTTCAAAAGATCATGACAGG TATAGGCATGATAGATCACCTGAGAGATCAAGAGGTGATAGGCAGAGAAACAATGACAGA TATGCCCAAGGAAGAGATGAAAAATCAGAAAGGTACAGATCTGAAGTGAAACATGATGAA GGAGACCAGAAGCGATCAAGGCGGGACACTGATTCTAGTGGACATTATGAAAGGAGGGGT AACGAAGATTCAGAAAGGTACAGGAAATCACGGAGATAA

Peptide Sequence

PEP ID	Os03t0826400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:34712797:34715006:1 gene:Os03g0826400 transcript:Os03t0826400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 25 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0826400-01)
Sequence	MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDRHH EPPMSHKKFPSSAGEQRFPDRAKEENKSTGREGQSSRSEAYKDRDSRLRHSDRGSKDHDR YRHDRSPERSRGDRQRNNDRYAQGRDEKSERYRSEVKHDEGDQKRSRRDTDSSGHYERRG NEDSERYRKSRR

Transcript Sequence

Transcript ID	Os03t0826400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34712797:34715006:1 gene:Os03g0826400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 25 description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os03t0826400-01)
Sequence	GAACCGACCGACCTTCCTGGTGGTGGATGTTCTAGCCAAGAACCCTAAAAAAAAAATTCC CCATCTCCTCCCAATCTGATTCCTCTCGAGACGGCGGATCCGAGCAATCTCTCCGGCGGA GGCGGCGGCGGCGGCGGCTGACGAGGGAAGATGAATCCTCTGACGCAGGTGAAGAGGACG CAGGTAATCAACCAGAAGGAAGCGCTTCTGGGCATCGGCGAGGACGGGTCGTGGCACGCC AAGTTCAAGGACTCCGCCTACGTCTTCGTCGGCGGCATCCCCTACGACCTCACCGAGGGC GACCTCCTCGCCGTGTTCGCGCAGTACGGCGAGGTGGTCGATGTGAACCTCGTGCGCGAC AAGGGCACCGGAAAATCCAAGGGATTTGCGTTTCTTGCGTACGAGGACCAGAGGAGCACG ATTCTTGCTGTTGATAATTTGAATGGAGCTAAAGTTCTTGGGAGGATTGTAAGAGTTGAT CATGTGAGCAAATACAAGAAAAAGGAGGAGGAGGATGAGGAGGAGCTGCAGAAGAAGAGG GAGGCCCGTGGCGTGTGCTACGCGTTCCAGAAAGGCGAATGCAACCGTGGAGCTTCCTGC AGATATTCCCATGATGAGCAGAGGAATGCAAACACTGGTTGGGGTTCTAAGGAGGAGAGC AAAGCAAGATGGGAGCATGACAGACACCATGAGCCACCGATGAGCCACAAGAAGTTCCCT TCGAGTGCTGGGGAACAAAGGTTCCCTGACAGAGCTAAAGAGGAGAACAAATCAACTGGC AGGGAAGGGCAGTCCTCAAGATCGGAGGCATACAAAGACCGTGATTCCAGGCTTAGGCAT AGTGATAGAGGTTCAAAAGATCATGACAGGTATAGGCATGATAGATCACCTGAGAGATCA AGAGGTGATAGGCAGAGAAACAATGACAGATATGCCCAAGGAAGAGATGAAAAATCAGAA AGGTACAGATCTGAAGTGAAACATGATGAAGGAGACCAGAAGCGATCAAGGCGGGACACT GATTCTAGTGGACATTATGAAAGGAGGGGTAACGAAGATTCAGAAAGGTACAGGAAATCA CGGAGATAAAATTTGGATTTGTTGTTGCTTCAGACGTTGTTCTGATCTGTTCGATGTTTG TTCTTGTACGAGATGGATAAGATTTTTGTTTGATCCTTGGGTCTGATATTAGTCTAATAG ATGCCATAGATTACATTTGAGATGATTTTG