Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0824200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:34614610:34616853:1 gene:Os03g0824200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase small domain containing protein. (Os03t0824200-01)
Sequence

ATGGCGGGCGGCGACAGCGCGGCGGTGTCGGCGGTGGAGGGGAGGCTGTCGGAGCTCTCC
ACCAACAGCGACGAGAAGGGGCTCCCCAGGAGGGGCAAGTCTTTATCAGGAAGGACATTA
AACACCGCACAGATTCAACTCGTTGCAAGCCATCCAGAGGTGTATGAACCATGTGATGAT
TCCTTTGCACTTGTCGATGCGCTTCTTTCTGACAAAGCACAACTTTTGACGCTAAAGCCA
AGATTATGCATGGAGATAGGATGTGGCAGTGGCTATGTTATCACATCTCTAGCAATCATG
CTCAGGCAGTTAGGCTCAGGAACCCAGTACCTCGCTACTGATATCAATCAACATGCTGTG
GAGACAACTCAAGCAACCCTTGAAGCCCATGGCGTCCATGCAGACGTGATTGCTACTGAT
ATTGTGTCAGGTCTTGAGAAACGCCTGCATGGTTTGGTTGACGTTGTTGTTGTGAACCCT
CCTTATGTACCAACACCTGAGGAAGAAATCGAGTCCAATGGCATCGCTTCATCTTGGGCT
GGAGGTATAAACGGGCGCCAAGTGATTGATCGGATCCTTCCTGCTGTGCGTGAGCTGCTA
TCTGAAAGAGGGTGGCTGTATATGATTGCTCTTGAAGATAACGATCCTCTGGATATCTGT
CATTTGATGAATGAGAAGGGCTATGCATCACGCGTTCTCTTGAAGAGATGCACTGAAGAA
GAAAGCCTTTATGTTCTAAAGTTTTGGCAGGACGCTTCCACTGGCACAAACGCTTCTCAT
GCCGCTAGATCACCACGCTCTGAATCCTCATGGCTTTCTCAGCTGCCTTTCAGATCCCTT
TGGCATAAGAATGCATAG

Peptide Sequence

PEP ID

Os03t0824200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:34614610:34616853:1 gene:Os03g0824200 transcript:Os03t0824200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase small domain containing protein. (Os03t0824200-01)
Sequence

MAGGDSAAVSAVEGRLSELSTNSDEKGLPRRGKSLSGRTLNTAQIQLVASHPEVYEPCDD
SFALVDALLSDKAQLLTLKPRLCMEIGCGSGYVITSLAIMLRQLGSGTQYLATDINQHAV
ETTQATLEAHGVHADVIATDIVSGLEKRLHGLVDVVVVNPPYVPTPEEEIESNGIASSWA
GGINGRQVIDRILPAVRELLSERGWLYMIALEDNDPLDICHLMNEKGYASRVLLKRCTEE
ESLYVLKFWQDASTGTNASHAARSPRSESSWLSQLPFRSLWHKNA

Transcript Sequence

Transcript ID

Os03t0824200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34614610:34616853:1 gene:Os03g0824200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase small domain containing protein. (Os03t0824200-01)
Sequence

GCACGCGCCGCCGCAGCCTCTCTCTCTCTCTCCGCCGCTCCGGCTTTCTCCTCCTCTTGC
TGCTCCGATTGCTCCATGGCGGGCGGCGACAGCGCGGCGGTGTCGGCGGTGGAGGGGAGG
CTGTCGGAGCTCTCCACCAACAGCGACGAGAAGGGGCTCCCCAGGAGGGGCAAGTCTTTA
TCAGGAAGGACATTAAACACCGCACAGATTCAACTCGTTGCAAGCCATCCAGAGGTGTAT
GAACCATGTGATGATTCCTTTGCACTTGTCGATGCGCTTCTTTCTGACAAAGCACAACTT
TTGACGCTAAAGCCAAGATTATGCATGGAGATAGGATGTGGCAGTGGCTATGTTATCACA
TCTCTAGCAATCATGCTCAGGCAGTTAGGCTCAGGAACCCAGTACCTCGCTACTGATATC
AATCAACATGCTGTGGAGACAACTCAAGCAACCCTTGAAGCCCATGGCGTCCATGCAGAC
GTGATTGCTACTGATATTGTGTCAGGTCTTGAGAAACGCCTGCATGGTTTGGTTGACGTT
GTTGTTGTGAACCCTCCTTATGTACCAACACCTGAGGAAGAAATCGAGTCCAATGGCATC
GCTTCATCTTGGGCTGGAGGTATAAACGGGCGCCAAGTGATTGATCGGATCCTTCCTGCT
GTGCGTGAGCTGCTATCTGAAAGAGGGTGGCTGTATATGATTGCTCTTGAAGATAACGAT
CCTCTGGATATCTGTCATTTGATGAATGAGAAGGGCTATGCATCACGCGTTCTCTTGAAG
AGATGCACTGAAGAAGAAAGCCTTTATGTTCTAAAGTTTTGGCAGGACGCTTCCACTGGC
ACAAACGCTTCTCATGCCGCTAGATCACCACGCTCTGAATCCTCATGGCTTTCTCAGCTG
CCTTTCAGATCCCTTTGGCATAAGAATGCATAGTAGCTGTTAGCCTTGTCGATTTATCTC
CAGTTCCAAAAGATAGCAACAAGTACTTTGCAACCTTCAGATGGCAGAAGTATCTGTAAA
CATGTCTGAAATGAGATGCTGCTGTTGGTCTCTGACTCCCTTCAAAAGAGTAAAAGAATC
AGAAATCAGACTGACTTGGTGGACTTAGCTATGAATGGTCCTATGAGCAATTAGCAATAA
AGTTCCAACCCTTTTATTTTGGGTGTTCTTCTATTTTGGTGTGTATATGTGCTAGTCTGG
ATTCCTTATCTTACTGCACTTGTAATATGGGTCCTGTTATTATCGAATGGATTAGTAAAC
CATATCAGCG