Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0822700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:34536280:34539296:1 gene:Os03g0822700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os03t0822700-01);Similar to Armadillo/beta-catenin-like repeat family protein. (Os03t0822700-02)
Sequence	ATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCAT GGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAG GCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATG AAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATG TTGGATGAGTTACAGGAGCATGTTGAATCCATTGACATGGCAAATGATCTGCACTCTATT GGTGGATTAGATCCCCTACTTGGTTACTTGAAAAATTCACATGCTGGCATCAGAGCAAAG GCTGCAGAGGTTGTGAGCACGATTGTGCAAAATAACCCCAAGAGCCAGCAACTTGTCATG GAATCTAATGGCCTGGAGCCACTGTTGACAAACTTCAGTTCCGATGCAAGCACGAATTCA CGCACAAAAGCTCTTGGAGCAATATCATCTCTAATTCGTCATAACCAGCCAGGAGTTGCT GCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGTTCTGATGATGCT AGACTTCAGAGGAAAGCTCTCCATCTCCTACAGTACCTACTGCACGACAACAAGGCTGAT AGGAGTGTTGCTACAGAGCTTGGTCTTCCAAAGCTGATGATGCACCTGGCATCGAGTGAT GATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACA TCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGA ATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAG CTTGTGGACTCCCTCTGGAAGGAGTGTTACAACGAGCCGTCGTCTCTCAGGGAGAAGGGT CTTGTTGTGCTTCCTGGAGAGGATGCACCTCAACAGCCACCACCGGATGTCGTTGGCAGC ATGTTTGAGCCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCA GAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAG

Peptide Sequence

PEP ID	Os03t0822700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:34536280:34539296:1 gene:Os03g0822700 transcript:Os03t0822700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os03t0822700-01);Similar to Armadillo/beta-catenin-like repeat family protein. (Os03t0822700-02)
Sequence	MAKDGGGPDWNGLLKWSLAHGDGTAKPRSLSEEDKKWFMEAMQANTMDVVKRMKEITQVM KTPDDVLQSQGVTPENIEDMLDELQEHVESIDMANDLHSIGGLDPLLGYLKNSHAGIRAK AAEVVSTIVQNNPKSQQLVMESNGLEPLLTNFSSDASTNSRTKALGAISSLIRHNQPGVA AFRLGNGYSALRDALGSDDARLQRKALHLLQYLLHDNKADRSVATELGLPKLMMHLASSD DSGVREAALGGLLELARDNTSGAGNVLPDQDKLKDVLKSRIEGISTMDADDLSAHREERQ LVDSLWKECYNEPSSLREKGLVVLPGEDAPQQPPPDVVGSMFEPPLRAWAASRPPPKEDS ESESAKKDPPLLLGPGPSS

Transcript Sequence

Transcript ID	Os03t0822700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34536280:34539296:1 gene:Os03g0822700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os03t0822700-01);Similar to Armadillo/beta-catenin-like repeat family protein. (Os03t0822700-02)
Sequence	GGAACACTCCGGACTCCTCCGCCGCCGCGTCCCCCGTCTCTCTCGACGACGCCTCGACTG ACGAGAGGAGGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGAGGGCGAGGAAGAGGAG GAGGCTTGTGCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCT CGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCC GACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGC TCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGAT GTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAG TCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCATGTT GAATCCATTGACATGGCAAATGATCTGCACTCTATTGGTGGATTAGATCCCCTACTTGGT TACTTGAAAAATTCACATGCTGGCATCAGAGCAAAGGCTGCAGAGGTTGTGAGCACGATT GTGCAAAATAACCCCAAGAGCCAGCAACTTGTCATGGAATCTAATGGCCTGGAGCCACTG TTGACAAACTTCAGTTCCGATGCAAGCACGAATTCACGCACAAAAGCTCTTGGAGCAATA TCATCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTAC TCTGCACTGAGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCAT CTCCTACAGTACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGT CTTCCAAAGCTGATGATGCACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCC TTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCT GACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGAT GCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAG TGTTACAACGAGCCGTCGTCTCTCAGGGAGAAGGGTCTTGTTGTGCTTCCTGGAGAGGAT GCACCTCAACAGCCACCACCGGATGTCGTTGGCAGCATGTTTGAGCCGCCGCTTCGCGCT TGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGAT CCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTT CGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGA AATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCT GTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCCACG