Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0821700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:34493749:34496857:-1 gene:Os03g0821700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0821700-01)
Sequence	ATGCCTCCTCCAGTCTCCTCCCCGTCGGCTCCGCGCCTCTCGCCGTCCGCGGCGCGCGCG GCCGAGCAGCATTGCCTCCGCCTCCTCGCGGCCTCCTCGACGCCCACGTCCCTCCTCCAG TCGGTCGCCTTCCTCCTCAAGTCCGGCCTCCACGCCAACTCGCTCGTCCTCACCCGGCTC TTCGCCGCCTCCGCCTCCGCCGCGCCCGCGCTGCTCGATCCCCTCGTCACCGCCCTCCTC CGCCCCTCCGTCCCGCTCGACGCCTTCCTCGCCAACACCCTCATCCGCGCCCACGCCACC TCCCCGATCCACTCCCTCCGCCTCCGCGCCGCCGCCTTCTTCCCCCTCATGCTCCGCGGC GCCGTCGTTCCCAACAAGTTCACCTTCCCCTTCCTCCTCAAGGCGTGCGCCGCGCTCCCG GGATCCCCGGACGTCGGCCTCCAGGCCCACGCCGCCGCTCTCAAGTTCGGGTTCGCGACG GATCAGTACGTCTCCAATACTCTCATACACATGTACTCCTGCTTTGGCGGCGGGTTCCTT GGCGACGCGCGGAATGTGTTTGATAGAATGCCCAAGGAGAGTGCCGTTACCTGGAGTGCG ATGATCGGCGGGTATGTGCGTGGGGGGCTGTCGAGTGATGCTGTCGATCTCTTCAGGGAG ATGCAGGCCAATGGGGTACAGGCCGATGAGGTGACAGTGATTGGAGTCCTGGCGGCGGCC ACAGATTTGGGTGCACTTGAGCTGGCTCGATGGGTCCGACGCTTTGTGGAGAGAGAGGGG ATCGGGAAGTCTGTGACACTGTGCAATGCACTGATCGACACGCTTGCTAAGTGTGGAGAT GTGGATGGGGCGGTGGCTGTGTTTGAGGGGATGCAGCAGCGGAGTGTTGTTTCATGGACA TCGGTGATTGATGCGCTTGCGATGGAGGGTCGTGGGAAGGAGGCTGTGCGAGTGTTTGAA GAGATGAAGGTTGCAGGTGTTCCACCTGATGATGTTGCCTTCATTGGGGTGCTCACAGCT TGCAGCCATGCTGGTATGGTGGATGAAGGCTGTGGCTACTTTGATGCCATGAAAGTGGAG TATGGCATTGAGCCTAAGATTGAGCACTATGGTTGCATGGTTGACATGTTTGGTCGGGCT GGCATGGTTGAGCGGGCGATGGAATTCGTCCGTACAATGCCTATACAACCGAACCCAGTA ATATGGCGATCACTTGTTTCTGCTTGTCGTGCGCATGGCCGCCTTGAGCTAGGTGAAAGC ATCACAAGGAGCCTTCTTCATGAGTACCCGGCCCATGAGGCCAACTATATCATGCTCTCG AATGTCTTTGCACTAACACAGAGATGGAAGGAGAAGTCAGAGATAAGGAGAGAGATGAGC AAGAGAGGAATCAAGAAAGTGCCAGGCTGTAGTATAGTTGAGCTTGATGGAGAGGTCCAT GAGTTCATAGCCGGAGATGAGTCTCACCCGCAGTACAAGGATATATACCGGATGGTTGAG GAAATGGCAAGAGAGCTAAGGCGCGTTGGGCACATTGCAGCTACCTCAGAGGTCTTACTT GATCTTGATGAGGAAGATAAGGAGGGTGCACTTCAGTGGCACAGTGAGAAGCTGGCAATT GCATTTGCACTACTGAGAACTCCTCCTGGAACACAGGTCCGAGTGGTTAAGAACCTACGT GTGTGCTCGGATTGTCATGCAGCTATAAAGTGCATTTCACAGGTTTATCGACGGGAGATT GTAGTGCGTGACCGGAGTCGTTTCCATCGCTTCAAGGATGGTTCCTGCTCATGCAAGGAT TTCTGGTGA

Peptide Sequence

PEP ID	Os03t0821700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:34493749:34496857:-1 gene:Os03g0821700 transcript:Os03t0821700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0821700-01)
Sequence	MPPPVSSPSAPRLSPSAARAAEQHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRL FAASASAAPALLDPLVTALLRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAFFPLMLRG AVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFL GDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAA TDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWT SVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVE YGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGES ITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVH EFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAI AFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKD FW

Transcript Sequence

Transcript ID	Os03t0821700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34493749:34496857:-1 gene:Os03g0821700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os03t0821700-01)
Sequence	GTGTTCGAGCAAATGCCTCCTCCAGTCTCCTCCCCGTCGGCTCCGCGCCTCTCGCCGTCC GCGGCGCGCGCGGCCGAGCAGCATTGCCTCCGCCTCCTCGCGGCCTCCTCGACGCCCACG TCCCTCCTCCAGTCGGTCGCCTTCCTCCTCAAGTCCGGCCTCCACGCCAACTCGCTCGTC CTCACCCGGCTCTTCGCCGCCTCCGCCTCCGCCGCGCCCGCGCTGCTCGATCCCCTCGTC ACCGCCCTCCTCCGCCCCTCCGTCCCGCTCGACGCCTTCCTCGCCAACACCCTCATCCGC GCCCACGCCACCTCCCCGATCCACTCCCTCCGCCTCCGCGCCGCCGCCTTCTTCCCCCTC ATGCTCCGCGGCGCCGTCGTTCCCAACAAGTTCACCTTCCCCTTCCTCCTCAAGGCGTGC GCCGCGCTCCCGGGATCCCCGGACGTCGGCCTCCAGGCCCACGCCGCCGCTCTCAAGTTC GGGTTCGCGACGGATCAGTACGTCTCCAATACTCTCATACACATGTACTCCTGCTTTGGC GGCGGGTTCCTTGGCGACGCGCGGAATGTGTTTGATAGAATGCCCAAGGAGAGTGCCGTT ACCTGGAGTGCGATGATCGGCGGGTATGTGCGTGGGGGGCTGTCGAGTGATGCTGTCGAT CTCTTCAGGGAGATGCAGGCCAATGGGGTACAGGCCGATGAGGTGACAGTGATTGGAGTC CTGGCGGCGGCCACAGATTTGGGTGCACTTGAGCTGGCTCGATGGGTCCGACGCTTTGTG GAGAGAGAGGGGATCGGGAAGTCTGTGACACTGTGCAATGCACTGATCGACACGCTTGCT AAGTGTGGAGATGTGGATGGGGCGGTGGCTGTGTTTGAGGGGATGCAGCAGCGGAGTGTT GTTTCATGGACATCGGTGATTGATGCGCTTGCGATGGAGGGTCGTGGGAAGGAGGCTGTG CGAGTGTTTGAAGAGATGAAGGTTGCAGGTGTTCCACCTGATGATGTTGCCTTCATTGGG GTGCTCACAGCTTGCAGCCATGCTGGTATGGTGGATGAAGGCTGTGGCTACTTTGATGCC ATGAAAGTGGAGTATGGCATTGAGCCTAAGATTGAGCACTATGGTTGCATGGTTGACATG TTTGGTCGGGCTGGCATGGTTGAGCGGGCGATGGAATTCGTCCGTACAATGCCTATACAA CCGAACCCAGTAATATGGCGATCACTTGTTTCTGCTTGTCGTGCGCATGGCCGCCTTGAG CTAGGTGAAAGCATCACAAGGAGCCTTCTTCATGAGTACCCGGCCCATGAGGCCAACTAT ATCATGCTCTCGAATGTCTTTGCACTAACACAGAGATGGAAGGAGAAGTCAGAGATAAGG AGAGAGATGAGCAAGAGAGGAATCAAGAAAGTGCCAGGCTGTAGTATAGTTGAGCTTGAT GGAGAGGTCCATGAGTTCATAGCCGGAGATGAGTCTCACCCGCAGTACAAGGATATATAC CGGATGGTTGAGGAAATGGCAAGAGAGCTAAGGCGCGTTGGGCACATTGCAGCTACCTCA GAGGTCTTACTTGATCTTGATGAGGAAGATAAGGAGGGTGCACTTCAGTGGCACAGTGAG AAGCTGGCAATTGCATTTGCACTACTGAGAACTCCTCCTGGAACACAGGTCCGAGTGGTT AAGAACCTACGTGTGTGCTCGGATTGTCATGCAGCTATAAAGTGCATTTCACAGGTTTAT CGACGGGAGATTGTAGTGCGTGACCGGAGTCGTTTCCATCGCTTCAAGGATGGTTCCTGC TCATGCAAGGATTTCTGGTGATGAAATTGTGTTTTACAAGGTTATTCTGTTTTGGACAAG ATGCTAATGAATTTTCCAGGGAGCTCCTGCAAGTCTCACACATCTGCATTGCAACACAAA GGTTTTCCACAGAAAAATGTGATGCTTATTCAAGGACGATGGAATCAGAATTGGAATATA ATTCAGAAAATATCAATTATCAAGGTTGAACTTTTCTTTTGTACATACACCAATAGATTG GATCGATCAATCCTGAGGCATCATTAAATTTTGATCTCTCGACAGTGTGAGGTTATGGAT TCTGCCCGCCGCATGCATGAAAATGGGATCTTGATCTATCTGGAGCATAATAAATGACTG GTGTTAGCCCCATGGCTTGAACGATGGTTCCTGCTGCAAAGAATTCCGGTGATGGAACTT TGATTGACCAAGGTTGTGGAAAACCAAGGGGAGTGCTACGACTTTACGACAGACAAGAAC GTTATGTTTGGAGGGGTGGAATTTTGAGACTAGATTGGGCACATTTCAGAAGAACACGAA CTTTTCTTTTTATTTTTTGCCCTAAACAGGACAGCATGTGAGCTTGGTGGGATAGAGTTC GGTGGTTGCTGGTCGGAAATGAGATGTAAGATCATTTGAAGAACTGAGAGAAGAACATGG TAGAATTGCAGAGAGCCAGTGAC