Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0821300-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:34474716:34478370:-1 gene:Os03g0821300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XA21 BINDING PROTEIN 15 description:Similar to TA11 protein (Fragment). (Os03t0821300-01);Similar to Protein phosphatase 2C 35. (Os03t0821300-02)
Sequence	ATGGGCAACTCCCTCGCCTGCTTCTGCTGCGGCGGCGGCGCCGGCGGCCGAGGCGGCCGC CACGTCGCCCCCGCCGCGCTCCCCTCCGACCCGGCCTACGACGAGGGCCTGGGCCACTCG TTCTGCTACGTCCGCCCCGACAAGTTCGTGGTTCCCTTCTCCGCGGATGATTTGGTGGCT GACGCGAAGGCGGCCGCGGCGGCGGAGGGGGAGGCGACCACGTTCCGGGCGATATCCGGG GCGGCGCTCAGTGCCAACGTATCCACGCCGCTGTCCACGTCCGTGCTGCTGCTGATGCCG GAGGAGTCGTCGGCGTCCGCCACCGCGTCGTCGGGGTTTGAGAGCTCGGAGTCGTTCGCT GCTGTGCCGCTGCAGCCGGTGCCGAGGTTCTCGTCCGGGCCGATCTCCGCGCCCTTCTCC GGCGGGTTCATGTCGGGGCCCTTGGAGAGGGGGTTCCAATCTGGGCCACTCGACGCCGCG CTCCTCTCGGGCCCTCTCCCTGGCACCGCCACCTCCGGTCGTATGGGTGGCGCCGTCCCT GCGCTCCGCCGGAGCCTCTCCCACGGTGGCCGCCGCCTCCGCAATTTCACCCGCGCGCTC CTCGCGCGCACCGAGAAGTTTCAGGATTCTGCGGATCTAGGCTCGCCGGACGCCGCCGCC GCCGCCGTCGCCGCCTGTGGGGGCGATCCCTGTGGTCTGCAGTGGGCGCAGGGGAAAGCC GGCGAGGACCGCGTCCACGTCGTCGTGTCGGAGGAGCGAGGCTGGGTGTTCGTCGGCATC TACGATGGGTTCAACGGCCCCGACGCCACCGACTTCCTGGTATCCAACCTCTACGCCGCC GTCCACCGCGAGCTCCGCGGCCTCCTCTGGGATCAGCGGGAGCAGAACGTGCAGCACGAC CAGCGCCCCGACCAACCCGGCTCAGCCCCAAGCACCACGGCCTCAGATAACCAAGACCAG TGGGGTCGCCGCCGCCGCACCCGCCGCTCAAGACCGCCGCGTGGCGCCGACGACGACCAG CGGCGGTGGAAGTGCGAGTGGGAGCAGGAGCGGGATTGCTCCAACCTGAAGCCACCAACG CAGCAGCGTCTTCGTTGCAACAGCGAGAACGACCACGTCGCCGTGCTCAAGGCGCTGACC CGTGCGCTGCACAGGACCGAGGAGGCTTACCTGGACATCGCCGACAAGATGGTCGGCGAG TTCCCTGAGCTTGCGCTCATGGGCTCTTGTGTTCTTGCCATGCTCATGAAAGGAGAGGAC ATGTACATCATGAATGTTGGCGATAGCCGGGCTGTGTTGGCAACAATGGACAGCGTCGAT CTCGAGCAGATCAGCCAGGGTTCATTCGATGGATCAGTCGGGGATTGCCCGCCATGCTTG TCGGCCGTGCAGCTCACGTCGGATCACAGCACTTCAGTGGAAGAGGAAGTAATCAGAATA CGAAACGAGCATCCTGATGATCCATCTGCCATCTCCAAGGATCGCGTGAAGGGCTCGCTG AAGGTGACCAGAGCATTTGGTGCTGGGTTTTTGAAACAGCCCAAGTGGAATGATGCACTC CTGGAGATGTTCAGAATTGATTACGTTGGGTCCTCCCCATACATATCATGCAATCCATCC CTTTTTCATCATAAGCTCAGCACAAGGGATAGATTCTTGATATTATCTTCAGATGGACTT TACCAGTATTTCACCAACGAGGAGGCAGTTGCTCAGGTCGAAATGTTCATCGCAACAACC CCTGAAGGCGACCCTGCCCAACATCTTGTGGAGGAAGTTCTTTTCCGTGCTGCCAACAAA GCAGGAATGGACTTTCATGAACTGATCGAGATACCACATGGTGATCGTCGGCGATACCAT GACGATGTATCTGTCATCGTCATCTCTTTGGAGGGCAGGATTTGGAGATCCTGCGTGTAA

Peptide Sequence

PEP ID	Os03t0821300-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:34474716:34478370:-1 gene:Os03g0821300 transcript:Os03t0821300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XA21 BINDING PROTEIN 15 description:Similar to TA11 protein (Fragment). (Os03t0821300-01);Similar to Protein phosphatase 2C 35. (Os03t0821300-02)
Sequence	MGNSLACFCCGGGAGGRGGRHVAPAALPSDPAYDEGLGHSFCYVRPDKFVVPFSADDLVA DAKAAAAAEGEATTFRAISGAALSANVSTPLSTSVLLLMPEESSASATASSGFESSESFA AVPLQPVPRFSSGPISAPFSGGFMSGPLERGFQSGPLDAALLSGPLPGTATSGRMGGAVP ALRRSLSHGGRRLRNFTRALLARTEKFQDSADLGSPDAAAAAVAACGGDPCGLQWAQGKA GEDRVHVVVSEERGWVFVGIYDGFNGPDATDFLVSNLYAAVHRELRGLLWDQREQNVQHD QRPDQPGSAPSTTASDNQDQWGRRRRTRRSRPPRGADDDQRRWKCEWEQERDCSNLKPPT QQRLRCNSENDHVAVLKALTRALHRTEEAYLDIADKMVGEFPELALMGSCVLAMLMKGED MYIMNVGDSRAVLATMDSVDLEQISQGSFDGSVGDCPPCLSAVQLTSDHSTSVEEEVIRI RNEHPDDPSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEMFRIDYVGSSPYISCNPS LFHHKLSTRDRFLILSSDGLYQYFTNEEAVAQVEMFIATTPEGDPAQHLVEEVLFRAANK AGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

Transcript Sequence

Transcript ID	Os03t0821300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34474716:34478370:-1 gene:Os03g0821300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XA21 BINDING PROTEIN 15 description:Similar to TA11 protein (Fragment). (Os03t0821300-01);Similar to Protein phosphatase 2C 35. (Os03t0821300-02)
Sequence	ATATTCCGGCATTTCAACCCCACCCACTCCGCACCCCCGCAAGTCAACTCTCTTCCTTCC TCCTCCGTGCTTAATGCTCTCCGCATTATAACCACCCACCTCTCCTCCTCCCCCCACCTC CTCTCTCTCTATCTCCATCTCCACCGCTACGCTTCCCAGCCATGGGCAACTCCCTCGCCT GCTTCTGCTGCGGCGGCGGCGCCGGCGGCCGAGGCGGCCGCCACGTCGCCCCCGCCGCGC TCCCCTCCGACCCGGCCTACGACGAGGGCCTGGGCCACTCGTTCTGCTACGTCCGCCCCG ACAAGTTCGTGGTTCCCTTCTCCGCGGATGATTTGGTGGCTGACGCGAAGGCGGCCGCGG CGGCGGAGGGGGAGGCGACCACGTTCCGGGCGATATCCGGGGCGGCGCTCAGTGCCAACG TATCCACGCCGCTGTCCACGTCCGTGCTGCTGCTGATGCCGGAGGAGTCGTCGGCGTCCG CCACCGCGTCGTCGGGGTTTGAGAGCTCGGAGTCGTTCGCTGCTGTGCCGCTGCAGCCGG TGCCGAGGTTCTCGTCCGGGCCGATCTCCGCGCCCTTCTCCGGCGGGTTCATGTCGGGGC CCTTGGAGAGGGGGTTCCAATCTGGGCCACTCGACGCCGCGCTCCTCTCGGGCCCTCTCC CTGGCACCGCCACCTCCGGTCGTATGGGTGGCGCCGTCCCTGCGCTCCGCCGGAGCCTCT CCCACGGTGGCCGCCGCCTCCGCAATTTCACCCGCGCGCTCCTCGCGCGCACCGAGAAGT TTCAGGATTCTGCGGATCTAGGCTCGCCGGACGCCGCCGCCGCCGCCGTCGCCGCCTGTG GGGGCGATCCCTGTGGTCTGCAGTGGGCGCAGGGGAAAGCCGGCGAGGACCGCGTCCACG TCGTCGTGTCGGAGGAGCGAGGCTGGGTGTTCGTCGGCATCTACGATGGGTTCAACGGCC CCGACGCCACCGACTTCCTGGTATCCAACCTCTACGCCGCCGTCCACCGCGAGCTCCGCG GCCTCCTCTGGGATCAGCGGGAGCAGAACGTGCAGCACGACCAGCGCCCCGACCAACCCG GCTCAGCCCCAAGCACCACGGCCTCAGATAACCAAGACCAGTGGGGTCGCCGCCGCCGCA CCCGCCGCTCAAGACCGCCGCGTGGCGCCGACGACGACCAGCGGCGGTGGAAGTGCGAGT GGGAGCAGGAGCGGGATTGCTCCAACCTGAAGCCACCAACGCAGCAGCGTCTTCGTTGCA ACAGCGAGAACGACCACGTCGCCGTGCTCAAGGCGCTGACCCGTGCGCTGCACAGGACCG AGGAGGCTTACCTGGACATCGCCGACAAGATGGTCGGCGAGTTCCCTGAGCTTGCGCTCA TGGGCTCTTGTGTTCTTGCCATGCTCATGAAAGGAGAGGACATGTACATCATGAATGTTG GCGATAGCCGGGCTGTGTTGGCAACAATGGACAGCGTCGATCTCGAGCAGATCAGCCAGG GTTCATTCGATGGATCAGTCGGGGATTGCCCGCCATGCTTGTCGGCCGTGCAGCTCACGT CGGATCACAGCACTTCAGTGGAAGAGGAAGTAATCAGAATACGAAACGAGCATCCTGATG ATCCATCTGCCATCTCCAAGGATCGCGTGAAGGGCTCGCTGAAGGTGACCAGAGCATTTG GTGCTGGGTTTTTGAAACAGCCCAAGTGGAATGATGCACTCCTGGAGATGTTCAGAATTG ATTACGTTGGGTCCTCCCCATACATATCATGCAATCCATCCCTTTTTCATCATAAGCTCA GCACAAGGGATAGATTCTTGATATTATCTTCAGATGGACTTTACCAGTATTTCACCAACG AGGAGGCAGTTGCTCAGGTCGAAATGTTCATCGCAACAACCCCTGAAGGCGACCCTGCCC AACATCTTGTGGAGGAAGTTCTTTTCCGTGCTGCCAACAAAGCAGGAATGGACTTTCATG AACTGATCGAGATACCACATGGTGATCGTCGGCGATACCATGACGATGTATCTGTCATCG TCATCTCTTTGGAGGGCAGGATTTGGAGATCCTGCGTGTAAATAGAAACAATAGTAGGCT AGTGAAACAAAACGTATAGAGGGGGTTCTTCCCATGCCTTCCTTGAGCTGAGAGGTGTTC TTGCGGCTACTCTACTCCTCTTCCCCCAGTTGCTACTGTACAATATCAACCAAGCACTGT GGGGGGTTGGATTCGGCTTGGGCTCTCGGCACATCCAGCTGAATCGCCATGAATCGCCCG CAGGGCTGGCCGCGTGGTATAATATGTTGATGTAAATGAGGATTTGTTCAATTATTAATA ATTTATAAAATCGACC