Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0820500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:34430457:34431364:1 gene:Os03g0820500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 3 description:Similar to WCOR719. (Os03t0820500-01)
Sequence

ATGGCGAACGCGACGTCGGGTGTGGCGGTGAGCGAGGAGTGCAAGGCGAGGTTCCAGGAG
CTGAGGGCGGGGCGGGCCCACAGGTTCGTGGTGTTCAAGATCGACGACGCGATGCGGCAG
GTGGTGGTCGACAGGGTGGGCCCACGCGACGCCGGCTTCGACGAGCTCACCGCCAGCCTC
CCCGCCGACGGCTGCCGCTACGCCGTGTACGACCACGACTTCACCGTCAGCGACGCCACG
GCCACGGCGGCCGCCGGCGAGGGCGGCGAGGCGCCGCGCAGCAAGATCTTCTTCGTGTCG
TGGTCGCCGGCGGCGGCGGACGTGAGGAGCAAGATGGTGTACGCGAGCTCCAACGAAGGG
TTCAAGAAGGAGCTCGACGGCGTCCAGATCGACCTGCAGGCCACCGACCCCAGCGAGCTC
ACCCTCGACGTGCTCAAGGACCACACCTCCTAA

Peptide Sequence

PEP ID

Os03t0820500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:34430457:34431364:1 gene:Os03g0820500 transcript:Os03t0820500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 3 description:Similar to WCOR719. (Os03t0820500-01)
Sequence

MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL
PADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEG
FKKELDGVQIDLQATDPSELTLDVLKDHTS

Transcript Sequence

Transcript ID

Os03t0820500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34430457:34431364:1 gene:Os03g0820500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 3 description:Similar to WCOR719. (Os03t0820500-01)
Sequence

CAAGCTACTGAGTGCAAATCTTCAATTGCAACTACTTTCTGCGAACTTCTGATCGACCAT
TGCAGAATCCAACTAATTGTTTCTTCAGACTTCTTCAGAGCATTCTCCAGGACACTTCGA
ACGAAACATGGCGAACGCGACGTCGGGTGTGGCGGTGAGCGAGGAGTGCAAGGCGAGGTT
CCAGGAGCTGAGGGCGGGGCGGGCCCACAGGTTCGTGGTGTTCAAGATCGACGACGCGAT
GCGGCAGGTGGTGGTCGACAGGGTGGGCCCACGCGACGCCGGCTTCGACGAGCTCACCGC
CAGCCTCCCCGCCGACGGCTGCCGCTACGCCGTGTACGACCACGACTTCACCGTCAGCGA
CGCCACGGCCACGGCGGCCGCCGGCGAGGGCGGCGAGGCGCCGCGCAGCAAGATCTTCTT
CGTGTCGTGGTCGCCGGCGGCGGCGGACGTGAGGAGCAAGATGGTGTACGCGAGCTCCAA
CGAAGGGTTCAAGAAGGAGCTCGACGGCGTCCAGATCGACCTGCAGGCCACCGACCCCAG
CGAGCTCACCCTCGACGTGCTCAAGGACCACACCTCCTAATTAATCACGCCGTTAATTAC
CTCGATTTTCCAAGTAATTACGTTGGCATTGCAGCCCATGTGTATGTGTGGTTTGTACGG
CTTGCTTGGTGTTTGGATTGTGTACGTGTGTGGTTAATTTACATTACGCGAATAATAAAG
AGACGATTAAACCGGTGATCGGTC