Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0820100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:34412840:34419139:1 gene:Os03g0820100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Auxin-resistance protein AXR1. (Os03t0820100-01)
Sequence	ATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTC AGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACC TGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTT ACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGAT GCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAAT GATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCT TCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTG AAACTAGATGATATCTGCAGGAAAGCAAATATTGTGTTGGTTGCTGCACGTTCATATGGT CTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGAC CACTTCCTGGATGATTTACGCCTTCACAATCCATGGGTTGAACTCAAGCAATTTGCAAAG TCAATTGATATAAATGATAAAGATCCTGTTGTGCACAAGCACACTCCCTACATTGTTATC CTTGTGAGGCTTGCAGAAAAATGGGCAGATGCACATGATGGGCGCTTACCTTCGACTAGG CAAGAGAAAAATGAATTCAAGGCACTGATTCGAGAATATATGCTTAATTTAGATGAAGAA AACTACAAAGAAGCAGTGGAGTCCTCGTATAAAGTCTCTGTTACTCCAGGGATCAGTGAT GAGATCCGTCAGATAATTGATGATAGCTCCGCTGAAGTGAATTCATCTTCTTCAGATTTC TGGGTTTTAGTGGCTGCTTTGAAGGAATTTATTGCAAATGAGGGCAACGGTGAGCTACCT CTTGAGGGGACGATACCTGATATGACTTCACTTACTGAGTACTATGTTAGCCTGCAAAAG ATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGAGCATCATGTAAAGGATATC TTGAAGCGAATTGATAGAGACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGC AAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCT CCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATGAAGACTACTGCTTTGCAATGAAC TTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGA ATCTTTGAAAGTGAGATTGATGAGGATGTGCCTAGGCTGAAGACAGCTGCTGTTTCAGTA ATGAGTGAGATGGGTATGAACGGGGCACCTTTGTCTGAAGACCTGATTACTGAAATGTGC CGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAA GAAGTAATTAAGCTGGTCACCAAACAGTTTGTGCCTTTGCTGGGAACATTTATATTCAAC GGGATTGATCACAAATCTCAAGTTTTGGCGTTATAA

Peptide Sequence

PEP ID	Os03t0820100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:34412840:34419139:1 gene:Os03g0820100 transcript:Os03t0820100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Auxin-resistance protein AXR1. (Os03t0820100-01)
Sequence	MAAATAAAFAEPKTKYDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGVGSV TVVDGSKVEQSDMGNNFLLDAECLGQSRAKSVCSFLQELNDAVNAKFVEESPLALIDTNP SFFSQFTVVIATQLPERSLLKLDDICRKANIVLVAARSYGLTGLVRISVKEHNVIESKPD HFLDDLRLHNPWVELKQFAKSIDINDKDPVVHKHTPYIVILVRLAEKWADAHDGRLPSTR QEKNEFKALIREYMLNLDEENYKEAVESSYKVSVTPGISDEIRQIIDDSSAEVNSSSSDF WVLVAALKEFIANEGNGELPLEGTIPDMTSLTEYYVSLQKIYQAKAESDCLALEHHVKDI LKRIDRDPDSISRAYIKTFCKNARKLRVCRYRSMEEEFSSPVLSEVQIYFTDEDYCFAMN FYVLLRAVDRLAANYNRCPGIFESEIDEDVPRLKTAAVSVMSEMGMNGAPLSEDLITEMC RFGGAEIHPVAAFIGGVASQEVIKLVTKQFVPLLGTFIFNGIDHKSQVLAL

Transcript Sequence

Transcript ID	Os03t0820100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34412840:34419139:1 gene:Os03g0820100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Auxin-resistance protein AXR1. (Os03t0820100-01)
Sequence	CTCCTTGCTCCGCCTCCACTTAGCTTGAGACCGCTTTATTCCTCGCTCAGGGAGGAGGAG GAGAAGGCGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACG CGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGC GGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGC ACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAA GAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACA ATCTGACATGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAA ATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGA GTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCAT TGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAA TATTGTGTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAA GGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAA TCCATGGGTTGAACTCAAGCAATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGT TGTGCACAAGCACACTCCCTACATTGTTATCCTTGTGAGGCTTGCAGAAAAATGGGCAGA TGCACATGATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTCAAGGCACTGAT TCGAGAATATATGCTTAATTTAGATGAAGAAAACTACAAAGAAGCAGTGGAGTCCTCGTA TAAAGTCTCTGTTACTCCAGGGATCAGTGATGAGATCCGTCAGATAATTGATGATAGCTC CGCTGAAGTGAATTCATCTTCTTCAGATTTCTGGGTTTTAGTGGCTGCTTTGAAGGAATT TATTGCAAATGAGGGCAACGGTGAGCTACCTCTTGAGGGGACGATACCTGATATGACTTC ACTTACTGAGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTG CCTTGCCTTGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTC TATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAG GTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTT CACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCG ACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGTGAGATTGATGAGGATGT GCCTAGGCTGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACC TTTGTCTGAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGT GGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCACCAAACAGTT TGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGC GTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAG TTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAAT GATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGAAAAGGTCAAAATACCCCT TGAAACAGTATGAATTTTG