Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0819600-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:34394521:34395608:-1 gene:Os03g0819600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:gold hull and internode 1, chalcone isomerase, chalcone flavonone isomerase description:Chalcone isomerase (EC 5.5.1.6). (Os03t0819600-01);Chalcone isomerase (EC 5.5.1.6). (Os03t0819600-02)
Sequence	ATGGCGGCCGTGTCGGAGGTGGAGGTCGACGGCGTCGTGTTCCCGCCGGTGGCCCGCCCG CCGGGCTCCGGCCACGCCCACTTCCTCGCCGGCGCAGGTGTGAGGGGAGTGGAGATCGCC GGCAACTTCATCAAGTTCACGGCCATCGGCGTGTACCTGGAGGAGGGCGCGGCCGTGCCG GCGCTGGCCAAGAAGTGGGCCGGCAAGTCCGCCGACGAGCTCGCCGCCGACGCCGCCTTC TTCCGCGACGTCGTCACCGGCGATTTCGAGAAGTTCACGAGGGTGACGATGATCCTGCCG CTCACCGGCGAGCAGTACTCGGACAAGGTGACGGAGAACTGCGTCGCGGCGTGGAAGGCC GCCGGCGTGTACACGGACGCCGAGGGCGCGGCCGCGGACAAGTTCAAGGAGGCCTTCAAG CCCCACAGCTTCCCTCCGGGCGCGTCCATCCTCTTCACCCACTCCCCGCCCGGCGTCCTC ACCGTCGCGTTCTCCAAGGACTCGTCGGTGCCAGAGGGCGCCGTGGCGGCGGCGGCGATC GAGAACAGGGCGCTCTGCGAGGCGGTGCTGGATTCCATCATCGGCGAGCACGGGGTCTCG CCGGCGGCGAAGCGGAGCATAGCGGCCCGCGTCTCGCAGCTCCTGAAGGCGGAATCCACC GGCGACGTGGCGGCGGCGGAGCCCGCGCCGGTGTCCGCGTGA

Peptide Sequence

PEP ID	Os03t0819600-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:34394521:34395608:-1 gene:Os03g0819600 transcript:Os03t0819600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:gold hull and internode 1, chalcone isomerase, chalcone flavonone isomerase description:Chalcone isomerase (EC 5.5.1.6). (Os03t0819600-01);Chalcone isomerase (EC 5.5.1.6). (Os03t0819600-02)
Sequence	MAAVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVP ALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKA AGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAI ENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVSA

Transcript Sequence

Transcript ID	Os03t0819600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:34394521:34395608:-1 gene:Os03g0819600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:gold hull and internode 1, chalcone isomerase, chalcone flavonone isomerase description:Chalcone isomerase (EC 5.5.1.6). (Os03t0819600-01);Chalcone isomerase (EC 5.5.1.6). (Os03t0819600-02)
Sequence	GTTAGTTGCTCACCCGATCCTGTATCCATGGCGGCCGTGTCGGAGGTGGAGGTCGACGGC GTCGTGTTCCCGCCGGTGGCCCGCCCGCCGGGCTCCGGCCACGCCCACTTCCTCGCCGGC GCAGGTGTGAGGGGAGTGGAGATCGCCGGCAACTTCATCAAGTTCACGGCCATCGGCGTG TACCTGGAGGAGGGCGCGGCCGTGCCGGCGCTGGCCAAGAAGTGGGCCGGCAAGTCCGCC GACGAGCTCGCCGCCGACGCCGCCTTCTTCCGCGACGTCGTCACCGGCGATTTCGAGAAG TTCACGAGGGTGACGATGATCCTGCCGCTCACCGGCGAGCAGTACTCGGACAAGGTGACG GAGAACTGCGTCGCGGCGTGGAAGGCCGCCGGCGTGTACACGGACGCCGAGGGCGCGGCC GCGGACAAGTTCAAGGAGGCCTTCAAGCCCCACAGCTTCCCTCCGGGCGCGTCCATCCTC TTCACCCACTCCCCGCCCGGCGTCCTCACCGTCGCGTTCTCCAAGGACTCGTCGGTGCCA GAGGGCGCCGTGGCGGCGGCGGCGATCGAGAACAGGGCGCTCTGCGAGGCGGTGCTGGAT TCCATCATCGGCGAGCACGGGGTCTCGCCGGCGGCGAAGCGGAGCATAGCGGCCCGCGTC TCGCAGCTCCTGAAGGCGGAATCCACCGGCGACGTGGCGGCGGCGGAGCCCGCGCCGGTG TCCGCGTGAAAATCGAGCTGCGAATTAACCGCGCATCTAAGAGCTCCTCCTACACTTCTT GTACACTTCTACTGCCCTCGTGTTTGACAATGAAATAAAAGGAAAGGAGAAATC