Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0818100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:34334756:34340124:1 gene:Os03g0818100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine acid phosphatase family protein. (Os03t0818100-01);Similar to Multiple inositol polyphosphate phosphatase PhyIIa2. (Os03t0818100-02)
Sequence

ATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCTCGTCTCCGCCGCGCTCCTC
GCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGCCGCGTTCGACGTCCGCCGC
CACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATCCAATAGTGTGTCCTCCGCG
CCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCTCGTGGCAAGACATGGGACT
CGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACTGGCGGTTCGGTTGAAGGCT
CTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCTGAAAAAAATTCCTTCATGG
ATGAAAGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGGTGGTGAGCTGGTCAGTGAA
GGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGAGAGGTTTCAAGGCCTATTT
GATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAACTCAGGTTCCTCGGGCATCA
GCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAAAGGGAAGCTTGGACCTGTG
AAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGTCTGCGATTC
TTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAAGGAGCCTGATGTTGAAAAG
CAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGTTAACCGTTATCATCTCAAT
TTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAAGCAGGAAGCATCTTTAATG
AATATAACCAATCAAGCTTGTCAACTTTTTAATGAAGCTGAGGTTTATTTTCTAGAGTGG
ACAGATGATCTGGAGGGCTTTGTGCTAAAAGGTTATGGTGAGTCAATAAACTATCGGATG
GGACTGCCATTGCTCAAGGACGTTGTCCAGTCAATGGAAGAAGCAATCGTTGCTAAAGAA
GAAAACCACCCTGATGGTACATATGAGAAGGCAAGGCTCCGATTTGCACATGCTGAAACT
GTTGTCCCTTTCTCATGTCTTCTTGGTCTTTTTCTTGAAGGATCAGATTTTGCGAAGATA
CAACGGGAGGAATCATTGGACATACCTCCTGTGCCACCACAGGGAAGAAATTGGAAGGGC
AGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTTGTACCAGTGCCCAGGAAAA
ACTGATGGTGGTAAGATTTCTCGGGATCAGAAGAGCTCATACTTCGTGCAGGTTATACAC
AATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGATTTCTGCCCATTTGAAGAG
TTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTACGACGCCCTATGCAAGATA
AGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAGGATGTCCAATTTCTTCCTA
GGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGATGTGAAGTCGGAGCTGTAG

Peptide Sequence

PEP ID

Os03t0818100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:34334756:34340124:1 gene:Os03g0818100 transcript:Os03t0818100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine acid phosphatase family protein. (Os03t0818100-01);Similar to Multiple inositol polyphosphate phosphatase PhyIIa2. (Os03t0818100-02)
Sequence

MAAPRTPLPLVLLLVSAALLAAAPLSPAAETGAAAFDVRRHLSTVTRYDVARGSNSVSSA
PSMSDECRVIHLNLVARHGTRAPTKKRIKELDRLAVRLKALIDEAKQGPESDSLKKIPSW
MKGWESPWKGRVKGGELVSEGEEELYNLAIRVKERFQGLFDEEYHPDVYSIRATQVPRAS
ASAVAFGLGLLSGKGKLGPVKNRAFSVLSESRASDICLRFFDSCETYKDYRKRKEPDVEK
QKEPILEHVTSALVNRYHLNFTPKDVSSLWFLCKQEASLMNITNQACQLFNEAEVYFLEW
TDDLEGFVLKGYGESINYRMGLPLLKDVVQSMEEAIVAKEENHPDGTYEKARLRFAHAET
VVPFSCLLGLFLEGSDFAKIQREESLDIPPVPPQGRNWKGSVVAPFAGNNMLALYQCPGK
TDGGKISRDQKSSYFVQVIHNEAPVSMPGCGNKDFCPFEEFKEKIVEPHLKHDYDALCKI
RPVAREEPSSFSSRMSNFFLGLFSQKGYRVSAQDVKSEL

Transcript Sequence

Transcript ID

Os03t0818100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34334756:34340124:1 gene:Os03g0818100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine acid phosphatase family protein. (Os03t0818100-01);Similar to Multiple inositol polyphosphate phosphatase PhyIIa2. (Os03t0818100-02)
Sequence

ACCCACACAAGTAAAGCTCCCAAAATCAAATTAAATTAAAGAGAAAAAAAAGAAGAAGAG
AAGGGCAAATCGATTCGCCATGGCTGCTCCCCGCACGCCTCTCCCCCTCGTCCTCCTCCT
CGTCTCCGCCGCGCTCCTCGCGGCGGCTCCCCTCTCGCCGGCGGCCGAGACCGGTGCCGC
CGCGTTCGACGTCCGCCGCCACCTCTCCACCGTCACCAGGTACGATGTGGCGAGGGGATC
CAATAGTGTGTCCTCCGCGCCGTCTATGTCGGATGAGTGCCGCGTGATCCACCTCAATCT
CGTGGCAAGACATGGGACTCGCGCACCTACCAAAAAGAGAATCAAAGAGCTGGATAGACT
GGCGGTTCGGTTGAAGGCTCTTATCGATGAAGCAAAACAAGGGCCTGAAAGTGACTCCCT
GAAAAAAATTCCTTCATGGATGAAAGGGTGGGAGTCACCCTGGAAAGGTAGGGTGAAAGG
TGGTGAGCTGGTCAGTGAAGGGGAGGAAGAGCTATACAACCTTGCTATCAGAGTCAAGGA
GAGGTTTCAAGGCCTATTTGATGAGGAATATCACCCTGATGTGTATTCAATAAGAGCAAC
TCAGGTTCCTCGGGCATCAGCTAGTGCAGTAGCATTTGGTTTGGGTCTACTTTCTGGGAA
AGGGAAGCTTGGACCTGTGAAAAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAG
TGATATTTGTCTGCGATTCTTTGATAGCTGTGAAACATACAAGGACTACAGGAAAAGAAA
GGAGCCTGATGTTGAAAAGCAAAAGGAACCAATTTTAGAACACGTCACATCGGCATTAGT
TAACCGTTATCATCTCAATTTTACACCAAAAGATGTTTCTTCCCTCTGGTTCCTTTGCAA
GCAGGAAGCATCTTTAATGAATATAACCAATCAAGCTTGTCAACTTTTTAATGAAGCTGA
GGTTTATTTTCTAGAGTGGACAGATGATCTGGAGGGCTTTGTGCTAAAAGGTTATGGTGA
GTCAATAAACTATCGGATGGGACTGCCATTGCTCAAGGACGTTGTCCAGTCAATGGAAGA
AGCAATCGTTGCTAAAGAAGAAAACCACCCTGATGGTACATATGAGAAGGCAAGGCTCCG
ATTTGCACATGCTGAAACTGTTGTCCCTTTCTCATGTCTTCTTGGTCTTTTTCTTGAAGG
ATCAGATTTTGCGAAGATACAACGGGAGGAATCATTGGACATACCTCCTGTGCCACCACA
GGGAAGAAATTGGAAGGGCAGTGTTGTTGCACCTTTTGCTGGTAACAATATGTTGGCTTT
GTACCAGTGCCCAGGAAAAACTGATGGTGGTAAGATTTCTCGGGATCAGAAGAGCTCATA
CTTCGTGCAGGTTATACACAATGAAGCTCCAGTTTCAATGCCGGGATGCGGGAACAAAGA
TTTCTGCCCATTTGAAGAGTTCAAGGAGAAGATAGTTGAACCCCACCTGAAGCATGACTA
CGACGCCCTATGCAAGATAAGGCCGGTGGCAAGAGAGGAGCCTTCCTCCTTCAGTTCCAG
GATGTCCAATTTCTTCCTAGGTTTGTTCTCGCAGAAAGGATACCGTGTTAGTGCTCAGGA
TGTGAAGTCGGAGCTGTAGGTTTATACTAGGCAGATGGTGCATCTTCTACCTTTCGCACT
AAGCTGCTACTATCCATCTACCATGGATAACCAAGGGACTGACTCGTGGACTAAACTACG
GTGTTTCTGTACTTGCAACCCTCAGTTTGATGAGCGAGTCCAATGTGTAACAACACGCTA
TCACTGGTGCCCCTCTTCTTTCAGATAGAAGACGTTTGTTGATCAATGTAATCTTTGTTT
TAATCTGGACTTTCTCTAGTGCTCAACTGCTGACTCTGTTGAGATCAAACTGAAAGTACT
AGCACACGGTTGTGATTGTGGCCCTTGTGGTAGGTTGAGATCATGTACTACTACTTGGAC
AATCCGTTTCAAGCTTTCAGCTCAATCAATCCAGATTTGGGAGATCCCCAATTCGAGATG