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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0815400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:34174779:34176667:1 gene:Os03g0815400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L17-like protein. (Os03t0815400-01)
Sequence

ATGGCAGCCTTCGCCACCGCGACCCCCTCGCCGGCGATCTCCGTGTCCCCCTGGAGCATG
TCGTCGCTCCGCGCCGCGCTCCCCTCCCCCACCCGCGCCTCCCCGGCGGGGAAGCTCCGG
TCGTCGTTCTCGCCCGCGGCGGCGGCCACGGCGGCGTCGGTCGGCTGCCTCAGCTCCTTC
TCCGGCCTCACCCCCATTTCGCCTCTCCTCTCCCTCGGGGAAGAGACTTCAAGCTTTGAG
CATCGATTGTTTGGTATTGATGCCCGTGGAAGGATAGTGGCAATGAGACATGGGAGGCGT
GTTCCTAAACTTAGCAGACCTCCAGATCAGCGAAAGGCACTTCTGCGCGGGCTGACCACG
CAGCTGCTCAAGTACGGAAGGATAAAGACTACCAGGCCAAGAGCAAAGGCAATGAGGAAG
TATGTTGAGAAGATGATCACACTGGCAAAGGATGGGTCTCTTCACAAGAGGAGGCAGGCT
CTGGCTTTTATCTATGAGAAGCATATAGTCCATGCGTTGTTCGCTGAGGTTGCAGACAGG
TATGGGGAAAGAGAGGGGGGCTACACAAGGATCATCCCAACATTTCCAAGACGGGGAGAC
AATGCACCTATGGCTTACATTGAGCTTGTCTAG

Peptide Sequence

PEP ID

Os03t0815400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:34174779:34176667:1 gene:Os03g0815400 transcript:Os03t0815400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L17-like protein. (Os03t0815400-01)
Sequence

MAAFATATPSPAISVSPWSMSSLRAALPSPTRASPAGKLRSSFSPAAAATAASVGCLSSF
SGLTPISPLLSLGEETSSFEHRLFGIDARGRIVAMRHGRRVPKLSRPPDQRKALLRGLTT
QLLKYGRIKTTRPRAKAMRKYVEKMITLAKDGSLHKRRQALAFIYEKHIVHALFAEVADR
YGEREGGYTRIIPTFPRRGDNAPMAYIELV

Transcript Sequence

Transcript ID

Os03t0815400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34174779:34176667:1 gene:Os03g0815400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L17-like protein. (Os03t0815400-01)
Sequence

ACTCGCCACCACCTCTCCAGCCGAAGCCGCTCACCCTCCTCCGCCTCCCTCCTCCTCTCC
CCGTCGCTCGCCATGGCAGCCTTCGCCACCGCGACCCCCTCGCCGGCGATCTCCGTGTCC
CCCTGGAGCATGTCGTCGCTCCGCGCCGCGCTCCCCTCCCCCACCCGCGCCTCCCCGGCG
GGGAAGCTCCGGTCGTCGTTCTCGCCCGCGGCGGCGGCCACGGCGGCGTCGGTCGGCTGC
CTCAGCTCCTTCTCCGGCCTCACCCCCATTTCGCCTCTCCTCTCCCTCGGGGAAGAGACT
TCAAGCTTTGAGCATCGATTGTTTGGTATTGATGCCCGTGGAAGGATAGTGGCAATGAGA
CATGGGAGGCGTGTTCCTAAACTTAGCAGACCTCCAGATCAGCGAAAGGCACTTCTGCGC
GGGCTGACCACGCAGCTGCTCAAGTACGGAAGGATAAAGACTACCAGGCCAAGAGCAAAG
GCAATGAGGAAGTATGTTGAGAAGATGATCACACTGGCAAAGGATGGGTCTCTTCACAAG
AGGAGGCAGGCTCTGGCTTTTATCTATGAGAAGCATATAGTCCATGCGTTGTTCGCTGAG
GTTGCAGACAGGTATGGGGAAAGAGAGGGGGGCTACACAAGGATCATCCCAACATTTCCA
AGACGGGGAGACAATGCACCTATGGCTTACATTGAGCTTGTCTAGGAGGCCGTTCATTTG
AGCGCGCTGCCTAGGTGGAGGGGTCAAGGGAATGCCTTTTTGAATATCTGTTTACATATT
TTCTTTTGTAACAAAATGTAGATCATGTGTGAAGTTTTGAACAGTGGAATTTCTATCCTG
TAACTACGAAAGCATTGTGCTACATTTTGGAAGTGTTCCTGGCACCATAATCTGGTGCCC
TTGAAGTTATGGATTGTTTTCCAGTCAGTTACT