Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0812400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:34036246:34037092:1 gene:Os03g0812400 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os03t0812400-01)
Sequence

ATGTCGCAGTTTGTGGCGACGTTCGAGTACTGCAGCCTGGCCGTGTCGGTGTCGTCTCTC
CTGATCAGGTTCGTCCTCCACCCGCTCGTCAGGGACGCCATCATCCTCGTCATGTCCAGA
GCTGGCGCGAGCTCCCTCTCCTGCGCCCTCCTCGGCCTCCTCGCGCACGACGACAGCGCC
CTCTTCGCCGCCGACGATCGCTGCGCCGGCGCCGTAGCCGTCGTCGAGCCACCGCCTCCG
CTGAGGCGGGAATGCGAGCTGTGCGCTCGTAGGGGCGGCGCCGGGCTGTCGCGCCACGAC
GTCGCGGCGGTCGTGGCGAGCCTCGGCATGGTCGCCGCCGGCGAAGATGACGACGACGAC
GACGAGGCGTGCGGCGTGTGCGAGGCGGTGGCGGCGGTGGAGGAGATGGCGGAGGGGAAG
GTGGCCGGGGAGGGCGAGCTGCGGGAGGCGTTCTACGTGTTCGATCGCGACGAGGACGGG
TACGTGAGCGCGGCGGAGCTGTGGAACGTGATGCGGAGGCTGGGCATTGAGGAGGGCGCG
CGGTACGGCGACTGCGTCAGGATGATCGCGGCGTACGACGGCGACGGCGATGGCCGGATC
AGCTTCCAGGAGTTCAGAGCCATGATGGAGAACGCGGTTTAG

Peptide Sequence

PEP ID

Os03t0812400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:34036246:34037092:1 gene:Os03g0812400 transcript:Os03t0812400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os03t0812400-01)
Sequence

MSQFVATFEYCSLAVSVSSLLIRFVLHPLVRDAIILVMSRAGASSLSCALLGLLAHDDSA
LFAADDRCAGAVAVVEPPPPLRRECELCARRGGAGLSRHDVAAVVASLGMVAAGEDDDDD
DEACGVCEAVAAVEEMAEGKVAGEGELREAFYVFDRDEDGYVSAAELWNVMRRLGIEEGA
RYGDCVRMIAAYDGDGDGRISFQEFRAMMENAV

Transcript Sequence

Transcript ID

Os03t0812400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:34036246:34037092:1 gene:Os03g0812400 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os03t0812400-01)
Sequence

AACTTCAATTCAAAGCTAGAACACAACACAAACACATCGCAAAAGTAAACAAAAAAAAAT
TACTACTCAAACATGTCGCAGTTTGTGGCGACGTTCGAGTACTGCAGCCTGGCCGTGTCG
GTGTCGTCTCTCCTGATCAGGTTCGTCCTCCACCCGCTCGTCAGGGACGCCATCATCCTC
GTCATGTCCAGAGCTGGCGCGAGCTCCCTCTCCTGCGCCCTCCTCGGCCTCCTCGCGCAC
GACGACAGCGCCCTCTTCGCCGCCGACGATCGCTGCGCCGGCGCCGTAGCCGTCGTCGAG
CCACCGCCTCCGCTGAGGCGGGAATGCGAGCTGTGCGCTCGTAGGGGCGGCGCCGGGCTG
TCGCGCCACGACGTCGCGGCGGTCGTGGCGAGCCTCGGCATGGTCGCCGCCGGCGAAGAT
GACGACGACGACGACGAGGCGTGCGGCGTGTGCGAGGCGGTGGCGGCGGTGGAGGAGATG
GCGGAGGGGAAGGTGGCCGGGGAGGGCGAGCTGCGGGAGGCGTTCTACGTGTTCGATCGC
GACGAGGACGGGTACGTGAGCGCGGCGGAGCTGTGGAACGTGATGCGGAGGCTGGGCATT
GAGGAGGGCGCGCGGTACGGCGACTGCGTCAGGATGATCGCGGCGTACGACGGCGACGGC
GATGGCCGGATCAGCTTCCAGGAGTTCAGAGCCATGATGGAGAACGCGGTTTAGACGTAC
TTGACGGTCCGGAGTTCATACCTCCTACTACTACATTGTATTTAGAGATTTAACGGATAC
TATTTCAGCGTTCCAGATGGTAAAATGTTTAATTACGACAAGTTTTGTTGAATTAAGCTC
GGATATG