Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0811700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:33998808:33999467:1 gene:Os03g0811700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit). (Os03t0811700-01)
Sequence	ATGGCGGCGGTGAGCTTGAGGAAGAGCAACGCGAGGCTGCCGCCGGAGGTGAACAGGGTG CTGTACGTGCGGAACCTGCCGTTCAACATCTCGAGCGAGGAGATGTACGACATCTTCGGC AAGTACGGCGCGATCCGGCAGATCCGGCTGGGGAACGCCAAGGACACCAGGGGCACGGCC TTCGTCGTCTACGAGGACATCTACGACGCCAAGAACGCCGTCGACCACCTCTCCGGCTTC AACGTCGCCAACCGCTACCTCATCGTGCTCTACTACCAGCCGGCCAAGATGTCCAAGAAG TCGGACGTCAAGAAGAAGGAGGAGGAGATCACCAGGCTGCAGGAGAAGTATGGCCTCGGC TCCAAGACGCCTTCATCCGCCCCCGACGCGTAG

Peptide Sequence

PEP ID	Os03t0811700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:33998808:33999467:1 gene:Os03g0811700 transcript:Os03t0811700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit). (Os03t0811700-01)
Sequence	MAAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDVKKKEEEITRLQEKYGLG SKTPSSAPDA

Transcript Sequence

Transcript ID	Os03t0811700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:33998808:33999467:1 gene:Os03g0811700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit). (Os03t0811700-01)
Sequence	GAGAGAGACGCGGCGAGGAGAAAGAAAAAAAAAATCCCCAAATCGAAAGCCGCGAGAGAC AGAAACCCTAGCGGAGAGGAGGGCGGCGATGGCGGCGGTGAGCTTGAGGAAGAGCAACGC GAGGCTGCCGCCGGAGGTGAACAGGGTGCTGTACGTGCGGAACCTGCCGTTCAACATCTC GAGCGAGGAGATGTACGACATCTTCGGCAAGTACGGCGCGATCCGGCAGATCCGGCTGGG GAACGCCAAGGACACCAGGGGCACGGCCTTCGTCGTCTACGAGGACATCTACGACGCCAA GAACGCCGTCGACCACCTCTCCGGCTTCAACGTCGCCAACCGCTACCTCATCGTGCTCTA CTACCAGCCGGCCAAGATGTCCAAGAAGTCGGACGTCAAGAAGAAGGAGGAGGAGATCAC CAGGCTGCAGGAGAAGTATGGCCTCGGCTCCAAGACGCCTTCATCCGCCCCCGACGCGTA GGATTCTCATCAGAAATCAGTTCTTCAGCTAGTACATGTATTTAAGAATCGGGAATTGCT TATTCAATCTTGCAGTTTGTGCTCGTGTGTTGTCTGTGCAATAGTTTCCTATCAATGAAA ATCACACAGCGGTATGTACTTTGACTGAAAGAACAATATGCAATGTGTACTTTGACTGGG