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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0811600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:33995633:33998631:-1 gene:Os03g0811600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 22 description:Similar to Peptidyl prolyl isomerase H. (Os03t0811600-01)
Sequence

ATGGCGTCCTCGGGGGGAGCGGCGATCTCGGCGGGGCCCACGCCGCCGTCGGCGGCGGCG
GCGTCGTCGTCGGTGGACTGGCACCTGCGGCCGCCGAACCCGAAGAACCCGGTGGTGTTC
TTCGACGTGACCATCGGGTCCATCCCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGAC
ATCGTCCCCAAGACGGCGGAGAACTTCCGGCAGTTCTGCACTGGAGAGCACAGGAAATCA
GGTTTACCACAGGGATATAAGGGTTGTCAGTTCCATCGAGTGATCAAAGATTTCATGATT
CAGGGAGGTGACTATATGAAGGGGGATGGTACTGGATGCACGTCAATCTATGGTACCAAA
TTTGATGATGAAAACTTCATTGCAAAGCATACTGGTCCTGGCCTACTTTCTATGGCAAAT
AGTGGGGTGAACTCTAATGGATCTCAGTTCTTTATAACTTGTGCAAAATGTGAATGGCTG
GACAACAAGCATGTGGTTTTTGGGAGGGTGCTAGGGGATGGTATGCTTGCTGTGCGGAAG
ATCGAGAATGTTGCAACTGGACCAAACAACCGACCGAAGCTCGCATGTGTCATAAGCGAG
TGTGGTGAGATGTAG

Peptide Sequence

PEP ID

Os03t0811600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:33995633:33998631:-1 gene:Os03g0811600 transcript:Os03t0811600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 22 description:Similar to Peptidyl prolyl isomerase H. (Os03t0811600-01)
Sequence

MASSGGAAISAGPTPPSAAAASSSVDWHLRPPNPKNPVVFFDVTIGSIPAGRIKMELFAD
IVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTK
FDDENFIAKHTGPGLLSMANSGVNSNGSQFFITCAKCEWLDNKHVVFGRVLGDGMLAVRK
IENVATGPNNRPKLACVISECGEM

Transcript Sequence

Transcript ID

Os03t0811600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33995633:33998631:-1 gene:Os03g0811600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 22 description:Similar to Peptidyl prolyl isomerase H. (Os03t0811600-01)
Sequence

GCCGTCGCCGCCGCCTCCGCCGCGTGCGAAGCTTGGAGAGTTCGAGCACGGGCATGGCGT
CCTCGGGGGGAGCGGCGATCTCGGCGGGGCCCACGCCGCCGTCGGCGGCGGCGGCGTCGT
CGTCGGTGGACTGGCACCTGCGGCCGCCGAACCCGAAGAACCCGGTGGTGTTCTTCGACG
TGACCATCGGGTCCATCCCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGTCC
CCAAGACGGCGGAGAACTTCCGGCAGTTCTGCACTGGAGAGCACAGGAAATCAGGTTTAC
CACAGGGATATAAGGGTTGTCAGTTCCATCGAGTGATCAAAGATTTCATGATTCAGGGAG
GTGACTATATGAAGGGGGATGGTACTGGATGCACGTCAATCTATGGTACCAAATTTGATG
ATGAAAACTTCATTGCAAAGCATACTGGTCCTGGCCTACTTTCTATGGCAAATAGTGGGG
TGAACTCTAATGGATCTCAGTTCTTTATAACTTGTGCAAAATGTGAATGGCTGGACAACA
AGCATGTGGTTTTTGGGAGGGTGCTAGGGGATGGTATGCTTGCTGTGCGGAAGATCGAGA
ATGTTGCAACTGGACCAAACAACCGACCGAAGCTCGCATGTGTCATAAGCGAGTGTGGTG
AGATGTAGTTTGTACCTTGAGGGTGACTATTCTTGGTGCTGCTGATGTAGAAATAGACTT
TGCATGGATGAAACTACTCCAGCATTGGAAGCACCATAAGACATAGCTGTACCAAAGTAT
CAATTCACCTTGAATGAGTGTCTGTCTATACACTGATGAAAGTTCATCCTCACTTCGTCA
GTGACATCAGTTGTCACTTAAACTGTTGATTAATATTCTAAACAGGGAATATGTGTGTCT
GTTCGACTTGAACCTTCGTCATGTCAAGTGGAGCTGGCATTATATTCAGCTGAACATGCT
TGATGAAATGATGAGTCGATCTGTGGTTGCACCCATTTTATAAAGTATACTAAACTATAA
GCTGCC