Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0811400-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:33973760:33975525:1 gene:Os03g0811400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 041 description:Similar to DNA binding protein. (Os03t0811400-00)
Sequence

ATGTTTCCGGTGGAGGTGGCGGCGGCGGCGGCGGCGGCGGGGAGGATGCAAGGGGAGGCG
GTGGTGCCGATGATGCTGCCGCCCTTCTTCATGGACTCGGGGATCTGGCCGGCGGCGGCG
GGGGTCGTGGATGTCGCCGCGTCGGCGGAGGAAGAGGCGGCGGCGGCGGCGGCGGCGGCG
CAGGACCGCGCGCTGGCGGCGTCGCGCAACCACCGCGAGGCCGAGAAGCGCCGCCGCGAG
CGGATCAAGTCGCACCTCGACCGCCTCCGCGCCGTCCTCGCATGCGACCCCAAGATAGAC
AAGGCGTCGCTGCTGGCGAAGGCGGTGGAGAGGGTGCGCGACCTGAAGCAGCGGATGGCC
GGCATCGGCGAGGCGGCGCCGGCGCACCTGTTCCCGACGGAGCACGACGAGATCGTGGTG
CTCGCGTCGGGCGGCGGCGGCGTCGGCGGCGCCGGCGGCGCGGCGGCGGTGTTCGAGGCC
TCCGTCTGCTGCGACGACCGCTGCGACCTCCTCCCGGAGCTCATCGAGACGCTGCGCGCG
CTCCGCCTCCGCACGCTCCGCGCCGAGATGGCCACCCTCGGCGGCCGCGTCCGCAACGTG
CTCGTCCTGGCGCGCGACGCCGGCGGCGCCGGCGAGGGCGGCGACGGCGACGACGACCGC
GCCGGTTACTCGGCCGTCTCCAACGACGGCGGCGACTTCCTAAAGGAAGCCCTGAGGGCT
CTTGTGGAGCGGCCGGGCGCCGCCGCCGGCGACCGGCCGAAGAGGAGGCGCGTCGTCTCC
GACATGAACATGCAAGCTGCAGCCTAG

Peptide Sequence

PEP ID

Os03t0811400-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:33973760:33975525:1 gene:Os03g0811400 transcript:Os03t0811400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 041 description:Similar to DNA binding protein. (Os03t0811400-00)
Sequence

MFPVEVAAAAAAAGRMQGEAVVPMMLPPFFMDSGIWPAAAGVVDVAASAEEEAAAAAAAA
QDRALAASRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKAVERVRDLKQRMA
GIGEAAPAHLFPTEHDEIVVLASGGGGVGGAGGAAAVFEASVCCDDRCDLLPELIETLRA
LRLRTLRAEMATLGGRVRNVLVLARDAGGAGEGGDGDDDRAGYSAVSNDGGDFLKEALRA
LVERPGAAAGDRPKRRRVVSDMNMQAAA

Transcript Sequence

Transcript ID

Os03t0811400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:33973760:33975525:1 gene:Os03g0811400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 041 description:Similar to DNA binding protein. (Os03t0811400-00)
Sequence

CCTCTCCCAGCAGCTGCAGCGGCAGCTAGCCAGCGATCGATCGATCGATCGAGCTACACG
TGAGATCGAGTGCGTGCAGTAGTGTGTGGTGTGCATGTTTCCGGTGGAGGTGGCGGCGGC
GGCGGCGGCGGCGGGGAGGATGCAAGGGGAGGCGGTGGTGCCGATGATGCTGCCGCCCTT
CTTCATGGACTCGGGGATCTGGCCGGCGGCGGCGGGGGTCGTGGATGTCGCCGCGTCGGC
GGAGGAAGAGGCGGCGGCGGCGGCGGCGGCGGCGCAGGACCGCGCGCTGGCGGCGTCGCG
CAACCACCGCGAGGCCGAGAAGCGCCGCCGCGAGCGGATCAAGTCGCACCTCGACCGCCT
CCGCGCCGTCCTCGCATGCGACCCCAAGATAGACAAGGCGTCGCTGCTGGCGAAGGCGGT
GGAGAGGGTGCGCGACCTGAAGCAGCGGATGGCCGGCATCGGCGAGGCGGCGCCGGCGCA
CCTGTTCCCGACGGAGCACGACGAGATCGTGGTGCTCGCGTCGGGCGGCGGCGGCGTCGG
CGGCGCCGGCGGCGCGGCGGCGGTGTTCGAGGCCTCCGTCTGCTGCGACGACCGCTGCGA
CCTCCTCCCGGAGCTCATCGAGACGCTGCGCGCGCTCCGCCTCCGCACGCTCCGCGCCGA
GATGGCCACCCTCGGCGGCCGCGTCCGCAACGTGCTCGTCCTGGCGCGCGACGCCGGCGG
CGCCGGCGAGGGCGGCGACGGCGACGACGACCGCGCCGGTTACTCGGCCGTCTCCAACGA
CGGCGGCGACTTCCTAAAGGAAGCCCTGAGGGCTCTTGTGGAGCGGCCGGGCGCCGCCGC
CGGCGACCGGCCGAAGAGGAGGCGCGTCGTCTCCGACATGAACATGCAAGCTGCAGCCTA
GCCGGCGGCCATAGCTCAACATAGCTATCAGTTTGCTTGGTATACTATACTACGTATTTT
GCTTGCCATGTTTTACTTAGTTTTTGTGTGCTAATTAGTTGCCATCTCCATATATATATG
GCTCTTCATGGTGATACCAATATTGCCAATTGATATGCCATATATGATTAAGTAGGATAT
ATATTACCATTAGGGTTTGCTTGAGCTTTCACCAAAAGCTGTTCCAAAGCCAATGCAAAC
CCAGCCACTGAATAACAATGTCAGCATCCCCAATATATGCAAGGTTTGCAGACTTACCCA
ACTAATTAAGCACAATATAAATGTATCAAATAT