Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0811100-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:33958707:33961891:1 gene:Os03g0811100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:magnesium chelatase subunit ChlD, magnesium-chelatase ChlD subunit, yellow-green leaf mutant 98, yellow-green leaf 7, magnesium-chelatase ChlD protein description:Magnesium-chelatase subunit ChlD, Chlorophyll synthesis, Chloroplast development (Os03t0811100-01);Similar to Chloroplast Mg-chelatase subunit XANTHA-G. (Os03t0811100-02)
Sequence	CAGGGGCACCGGGCTGAGCTGTATGCTGCTCGAGTGGCAAAATGTCTTGCTGCTATGGAA GGGCGTGAAAAAGTATATGTGGATGACCTTAAGAAAGCTGTAGAGCTAGTTATTCTACCT CGATCAATCCTATCTGATAACCCACAGGAGCAGCAAGACCAACAACCTCCTCCACCCCCA CCGCCACCCCCTCCACAAGATCAAGATTCTCAAGAAGATCAAGATGAAGACGAGGAAGAG GACCAAGAGGACGATGATGAAGAAAATGAACAGCAGGACCAGCAGATACCTGAGGAGTTC ATTTTTGATGCTGAAGGTGGTATAGTAGATGAGAAGCTCCTTTTCTTTGCTCAGCAAGCT CAAAGACGGCGAGGGAAAGCTGGACGAGCAAAGAATCTCATATTCTCATCTGATAGGGGA CGATACATAGGTTCTATGCTTCCCAAGGGTCCAATAAGGAGGTTAGCTGTTGATGCCACA CTTCGAGCAGCTGCACCATACCAGAAACTGAGGAGAGAGAAAGATCGTGACAAGACAAGA AAGGTTTTTGTTGAAAAAACTGACATGAGAGCCAAAAGAATGGCTCGAAAAGCAGGCGCA CTGGTCATATTTGTTGTGGATGCTAGCGGTAGCATGGCTCTGAATCGCATGCAGAATGCG AAAGGTGCAGCATTAAAGTTGCTTGCAGAAAGCTACACAAGCAGAGATCAGGTTTCAATC ATTCCATTTCGTGGAGATTTTGCTGAGGTTCTTCTTCCACCTTCAAGATCCATAGCAATG GCCCGCAATCGTCTTGAGAAGCTACCATGTGGTGGCGGTTCTCCTTTAGCTCACGGCCTT AGCACAGCTGTCAGAGTGGGTTTGAATGCTGAAAAGAGCGGTGATGTTGGACGTATCATG ATTGTTGCAATCACCGATGGAAGAGCTAATGTGTCACTGAAGAAATCGACTGACCCAGAA GCCACTTCAGATGCTCCAAGACCTTCTTCTCAAGAATTAAAGGATGAGATACTTGAGGTG GCTGGCAAAATATACAAGGCTGGAATTTCACTTCTTGTTATTGATACCGAGAACAAGTTT GTATCCACAGGATTTGCCAAGGAAATTGCAAGGGTCGCCCAAGGTAAATACTATTACCTG CCGAATGCTTCAGACGCTGTTATTTCCGCCGCCACCAAGACTGCACTCTCGGACCTGAAG AGTTCGTGA

Peptide Sequence

PEP ID	Os03t0811100-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:33958707:33961891:1 gene:Os03g0811100 transcript:Os03t0811100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:magnesium chelatase subunit ChlD, magnesium-chelatase ChlD subunit, yellow-green leaf mutant 98, yellow-green leaf 7, magnesium-chelatase ChlD protein description:Magnesium-chelatase subunit ChlD, Chlorophyll synthesis, Chloroplast development (Os03t0811100-01);Similar to Chloroplast Mg-chelatase subunit XANTHA-G. (Os03t0811100-02)
Sequence	QGHRAELYAARVAKCLAAMEGREKVYVDDLKKAVELVILPRSILSDNPQEQQDQQPPPPP PPPPPQDQDSQEDQDEDEEEDQEDDDEENEQQDQQIPEEFIFDAEGGIVDEKLLFFAQQA QRRRGKAGRAKNLIFSSDRGRYIGSMLPKGPIRRLAVDATLRAAAPYQKLRREKDRDKTR KVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQVSI IPFRGDFAEVLLPPSRSIAMARNRLEKLPCGGGSPLAHGLSTAVRVGLNAEKSGDVGRIM IVAITDGRANVSLKKSTDPEATSDAPRPSSQELKDEILEVAGKIYKAGISLLVIDTENKF VSTGFAKEIARVAQGKYYYLPNASDAVISAATKTALSDLKSS

Transcript Sequence

Transcript ID	Os03t0811100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:33958707:33961891:1 gene:Os03g0811100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:magnesium chelatase subunit ChlD, magnesium-chelatase ChlD subunit, yellow-green leaf mutant 98, yellow-green leaf 7, magnesium-chelatase ChlD protein description:Magnesium-chelatase subunit ChlD, Chlorophyll synthesis, Chloroplast development (Os03t0811100-01);Similar to Chloroplast Mg-chelatase subunit XANTHA-G. (Os03t0811100-02)
Sequence	CAGGGGCACCGGGCTGAGCTGTATGCTGCTCGAGTGGCAAAATGTCTTGCTGCTATGGAA GGGCGTGAAAAAGTATATGTGGATGACCTTAAGAAAGCTGTAGAGCTAGTTATTCTACCT CGATCAATCCTATCTGATAACCCACAGGAGCAGCAAGACCAACAACCTCCTCCACCCCCA CCGCCACCCCCTCCACAAGATCAAGATTCTCAAGAAGATCAAGATGAAGACGAGGAAGAG GACCAAGAGGACGATGATGAAGAAAATGAACAGCAGGACCAGCAGATACCTGAGGAGTTC ATTTTTGATGCTGAAGGTGGTATAGTAGATGAGAAGCTCCTTTTCTTTGCTCAGCAAGCT CAAAGACGGCGAGGGAAAGCTGGACGAGCAAAGAATCTCATATTCTCATCTGATAGGGGA CGATACATAGGTTCTATGCTTCCCAAGGGTCCAATAAGGAGGTTAGCTGTTGATGCCACA CTTCGAGCAGCTGCACCATACCAGAAACTGAGGAGAGAGAAAGATCGTGACAAGACAAGA AAGGTTTTTGTTGAAAAAACTGACATGAGAGCCAAAAGAATGGCTCGAAAAGCAGGCGCA CTGGTCATATTTGTTGTGGATGCTAGCGGTAGCATGGCTCTGAATCGCATGCAGAATGCG AAAGGTGCAGCATTAAAGTTGCTTGCAGAAAGCTACACAAGCAGAGATCAGGTTTCAATC ATTCCATTTCGTGGAGATTTTGCTGAGGTTCTTCTTCCACCTTCAAGATCCATAGCAATG GCCCGCAATCGTCTTGAGAAGCTACCATGTGGTGGCGGTTCTCCTTTAGCTCACGGCCTT AGCACAGCTGTCAGAGTGGGTTTGAATGCTGAAAAGAGCGGTGATGTTGGACGTATCATG ATTGTTGCAATCACCGATGGAAGAGCTAATGTGTCACTGAAGAAATCGACTGACCCAGAA GCCACTTCAGATGCTCCAAGACCTTCTTCTCAAGAATTAAAGGATGAGATACTTGAGGTG GCTGGCAAAATATACAAGGCTGGAATTTCACTTCTTGTTATTGATACCGAGAACAAGTTT GTATCCACAGGATTTGCCAAGGAAATTGCAAGGGTCGCCCAAGGTAAATACTATTACCTG CCGAATGCTTCAGACGCTGTTATTTCCGCCGCCACCAAGACTGCACTCTCGGACCTGAAG AGTTCGTGATCCTGGAGAGCGTTTTACCTTCAGATAATGAGTGGTTTTTACCTTTTACCT TGTTTGGTGCAGCAGTGTCCATGTTTCGTGTAACTTTGGGACGTTTCGGCTGTGATAACC AATTTTGGCATAGGATTTTTACCGTGAGAGTTGGAATTCGGGCGTAGCACCGTGTAAAGA ATCATATAATCCCTCTTCTGTCTAAATAATTGGCCATGT