Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0810900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:33941695:33946147:-1 gene:Os03g0810900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A IV beta description:ARF/SAR superfamily domain containing protein. (Os03t0810900-01)
Sequence	ATGGATTTGTCCGGGGAAGCAAGCCTCGGGGGATTCAAGATCGGGCCATCGACGCTCGTC GGCCGCGGGGTAGCCATCCGCGTGCTCCTCCTCAGCTCGCTGTGGCGCCTGCGCGAGCGC GCCTACGCCGCCGCCTCGCGCGTGCGCGGCGCGGCGCTTCCGGTGGTCGCGCCCTGGCTC CACCTCAGGAACACCCATGGCATCCTCCTCGTGGTTGTCCTCTTCGCGCTGTTCCTGAGG CGGCTCTCTGGCGCGCGGTCGCGGGCGGCGCTGGCGCGCCGGCGGTTGCAGTGCAAGAAG GCGATGAGGTACGCGGCGAGCTACGAGGAGTGGGCGCGCGCCGCCAAGGTGCTCGACAAA ATGTCTGAGCAGGTCAGTGAGAGCGATTTCTACGACGAGGAGCTCATCAGGAACAGGCTG GAGGAGCTCCGAAGGCGGAGGGAGGAAGGGTCGCTCCGGGATGTGGTGTTCTGCATGCGT GGTGATCTTGTGAGGAATTTGGGGAACATGTGCAATCCCGAGCTTCATAAGGGCAGGCTT GAGGTTCCTAAGCTTATAAAAGATTACATTGATGAGGTTTCTGCCCAGCTGAAAATGGTA TGTGAATCTGATACCGATGATTTGCTTTTGGAAGAGAAACTTGCCTTTGTTCAAGAGACC AGGCATGCCTTTGGGAGGACAGCATTACTCTTAAGTGGGGGTGCTTCACTGGGATCTTTT CATGTAGGTGTAGTGAAAACACTGGTTGAGCACAAGCTTTTGCCTCGAATAGTTGCAGGA TCTAGTGTTGGTTCCATTATATGTTCAATTGTTGCGACCCGAACATGGCCTGAGATCCAG AGCTTCTTTGTAGACTCATTGCAGACCTTGCAGTTCTTTGATAGGATAGGTGGAATTTTT GCAGTAACAAAACGGGTTATGACTTATGGTGCACTCCATGACATTAGCCAGATGCAAAGG CTTTTGAGGGATCTGACAGGCAACTTAACATTTCAAGAGGCTTATGACATGACTGGCCGT GTTCTTGGCGTCACAGTTTGCTCTCCTAGAAAAAATGAGCCACCCCGCTGCCTCAACTAC CTGACATCACCACATGTTGTTATTTGGAGTGCCGTGACTGCCTCTTGTGCATTTCCTGGG CTCTTCGAAGCTCAGGAATTGATGGCAAAGAATAGATTTGGTGAGATAGTTCCCTTCCAC GCACCCTTTTCCACAGACCCAGAGCAAGGTCCTGGAGCATCAAAGCGTCGGTGGAGGGAT GGAAGTTTGGAGATGGATCTGCCCATGATGCAACTCAAAGAGTTGTTCAACGTAAATCAC TTCATTGTGAGCCAAACTAATCCTCACATCTCTCCACTCCTCCGACTGAAGGAGATTGTC ACAACCTATGGAGGTCGCTTCGCTGGAAAGCTTGCTCGTCTGGCTGAAATGGAGGTTAAG TACAGATGTAACCAAATCCTAGAAATTGGCCTCCCACTGGGAGGACTAGCGAAATTGTTT GCTCAGGATTGGGAGGGTGATGTCACCATGGTTATGCCGGCAACAGCAGCCCAGTACTTG AAGATTATACAAAACCCTACATATGCGGAGCTGCAAATGGCTGCCAACCAGGGGCGCAGG TGCACATGGGAGAAGATCTCTGCGATCAGAACAAACTGTGCTATTGAACTTGCGTTGGAT GAGTCCATTGCCGTTCTAAACCATAAAAGAAGACTAAAGAGAAGCATGGAAAGGGTAGCT TCTGCTTCCCAGGGATATACATGCAGTTCTGTAATCAGAACACCAAGGAGGGTACCATCG TGGAGCTGCATCAGTCGAGAGAATTCTACAGGATCTCTCTCAGAAGATTGTTTTGCAACC ACTAGTTCATCTACTCACCAAGGAATTCAAGTTGTTGCCACACCGAACGTTATTCATAAT GATGGAAGTGAGAGTGAATCAGAAACCATTGACTTAAATTCTTGGACCCGGAGTGGTGGA CCTCTAATGAGGACTTCATCAGCTGACATGTTCATCAATTTCATTCAGAATCTTGAGATA GAGTCTGAGTTCAATACAGGTAATTCATCAGGATCTACCGTTTCTAAAGATTCATGCCCA AACAATAATTCTGGAGTTACTGCACAAGGTACAGATAGAAGCACAGACACATCTGAAACT GGTTCATGCAATACTGGCAACAATATAGCTAGTCAACCCTCTACCTCTACAAGCATTGCT GTTTCTGAAGGAGAACTGCTGCAACCAGAAAGGAGTACTAACGGAATTCTAATTAATGTT GTCAAAAGAAAGAGTGTGTTTGGTGAGCATGAAAGCGAAGCTGAAACCGAATCATATGTG GACACAACAAATTTGGACACTTCTGACTGTCCTGGAGATAACAAAGATGCAGCTGACTCA AACGATCTTTCAGCTGCTCATACTGATTCTGTGACTTCACAACATTCTTCAGCTGATGAA TAG

Peptide Sequence

PEP ID	Os03t0810900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:33941695:33946147:-1 gene:Os03g0810900 transcript:Os03t0810900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A IV beta description:ARF/SAR superfamily domain containing protein. (Os03t0810900-01)
Sequence	MDLSGEASLGGFKIGPSTLVGRGVAIRVLLLSSLWRLRERAYAAASRVRGAALPVVAPWL HLRNTHGILLVVVLFALFLRRLSGARSRAALARRRLQCKKAMRYAASYEEWARAAKVLDK MSEQVSESDFYDEELIRNRLEELRRRREEGSLRDVVFCMRGDLVRNLGNMCNPELHKGRL EVPKLIKDYIDEVSAQLKMVCESDTDDLLLEEKLAFVQETRHAFGRTALLLSGGASLGSF HVGVVKTLVEHKLLPRIVAGSSVGSIICSIVATRTWPEIQSFFVDSLQTLQFFDRIGGIF AVTKRVMTYGALHDISQMQRLLRDLTGNLTFQEAYDMTGRVLGVTVCSPRKNEPPRCLNY LTSPHVVIWSAVTASCAFPGLFEAQELMAKNRFGEIVPFHAPFSTDPEQGPGASKRRWRD GSLEMDLPMMQLKELFNVNHFIVSQTNPHISPLLRLKEIVTTYGGRFAGKLARLAEMEVK YRCNQILEIGLPLGGLAKLFAQDWEGDVTMVMPATAAQYLKIIQNPTYAELQMAANQGRR CTWEKISAIRTNCAIELALDESIAVLNHKRRLKRSMERVASASQGYTCSSVIRTPRRVPS WSCISRENSTGSLSEDCFATTSSSTHQGIQVVATPNVIHNDGSESESETIDLNSWTRSGG PLMRTSSADMFINFIQNLEIESEFNTGNSSGSTVSKDSCPNNNSGVTAQGTDRSTDTSET GSCNTGNNIASQPSTSTSIAVSEGELLQPERSTNGILINVVKRKSVFGEHESEAETESYV DTTNLDTSDCPGDNKDAADSNDLSAAHTDSVTSQHSSADE

Transcript Sequence

Transcript ID	Os03t0810900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:33941695:33946147:-1 gene:Os03g0810900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A IV beta description:ARF/SAR superfamily domain containing protein. (Os03t0810900-01)
Sequence	GGAGGCATCATATGGGACATTAGGGTCCCATCGGTTTATTATCCAACTGCCAAATTATCC ACTATCTTACGAAATTTCTTTTCAAGGTTACACTGTTTCCGCTCAAAATTCAAGTCCAGC CTCAAGAGATACGGAGGATATCATGCTTGCGCCATCAAAATTCCTCTTCCTCGATCTCAC CTCACCTGTGCGTAGAGACTAGAGAGAGGAGAGGAGACGGATGGACTTGCGCTGCACATA ACCAACTGGTTCTTGCTTCCACGCTTGCTCCACTCCCCACTCCCCGTGGAGTCGCGCGGT TTCCCCCCGCTTCCACGCAATTTTTTTTTCTTTAATGAGATTAGTATAATCTGCTTGATT CGTCCAAGACTATCGGGAGCTTGCGCTTATTAGCTTCTTCTTTTCATTCCGATTTGGTGG GGTTTGAGTTTGATTGATTCTTTCCCCCCACGTTTCCTTGTTCTTGATGTGTATCGATTC GAGGGTGAGATCAAAGTATCAAACCATACGATTCTTGGGGTATTTGGGTTGTTTTAGCTT CTGATGATTTCTTGATCTGGAAGCTTGCGCGATCTCACAATCCGAATCTTTTAGCTCGGA TTGCGTGTCTACAAGGCTCCATTGATCCGTTGTTTGGTTGCATCATCAGGATCACTTTTT TCCTTCTAAGTTCTACACTCCAAGGGTCGATACGAATTGGGGATTCTGCAGTTGTTTCTG CTCAAAATTTCAGTCTCTTTGGATATCAAAAGCTCAATTCAAGGTCAGAGTTTGGGAATT TTCCCAGTTTTTGACTTGTCAAGCTCAATCAAGATCGCCAATGGATTTGTCCGGGGAAGC AAGCCTCGGGGGATTCAAGATCGGGCCATCGACGCTCGTCGGCCGCGGGGTAGCCATCCG CGTGCTCCTCCTCAGCTCGCTGTGGCGCCTGCGCGAGCGCGCCTACGCCGCCGCCTCGCG CGTGCGCGGCGCGGCGCTTCCGGTGGTCGCGCCCTGGCTCCACCTCAGGAACACCCATGG CATCCTCCTCGTGGTTGTCCTCTTCGCGCTGTTCCTGAGGCGGCTCTCTGGCGCGCGGTC GCGGGCGGCGCTGGCGCGCCGGCGGTTGCAGTGCAAGAAGGCGATGAGGTACGCGGCGAG CTACGAGGAGTGGGCGCGCGCCGCCAAGGTGCTCGACAAAATGTCTGAGCAGGTCAGTGA GAGCGATTTCTACGACGAGGAGCTCATCAGGAACAGGCTGGAGGAGCTCCGAAGGCGGAG GGAGGAAGGGTCGCTCCGGGATGTGGTGTTCTGCATGCGTGGTGATCTTGTGAGGAATTT GGGGAACATGTGCAATCCCGAGCTTCATAAGGGCAGGCTTGAGGTTCCTAAGCTTATAAA AGATTACATTGATGAGGTTTCTGCCCAGCTGAAAATGGTATGTGAATCTGATACCGATGA TTTGCTTTTGGAAGAGAAACTTGCCTTTGTTCAAGAGACCAGGCATGCCTTTGGGAGGAC AGCATTACTCTTAAGTGGGGGTGCTTCACTGGGATCTTTTCATGTAGGTGTAGTGAAAAC ACTGGTTGAGCACAAGCTTTTGCCTCGAATAGTTGCAGGATCTAGTGTTGGTTCCATTAT ATGTTCAATTGTTGCGACCCGAACATGGCCTGAGATCCAGAGCTTCTTTGTAGACTCATT GCAGACCTTGCAGTTCTTTGATAGGATAGGTGGAATTTTTGCAGTAACAAAACGGGTTAT GACTTATGGTGCACTCCATGACATTAGCCAGATGCAAAGGCTTTTGAGGGATCTGACAGG CAACTTAACATTTCAAGAGGCTTATGACATGACTGGCCGTGTTCTTGGCGTCACAGTTTG CTCTCCTAGAAAAAATGAGCCACCCCGCTGCCTCAACTACCTGACATCACCACATGTTGT TATTTGGAGTGCCGTGACTGCCTCTTGTGCATTTCCTGGGCTCTTCGAAGCTCAGGAATT GATGGCAAAGAATAGATTTGGTGAGATAGTTCCCTTCCACGCACCCTTTTCCACAGACCC AGAGCAAGGTCCTGGAGCATCAAAGCGTCGGTGGAGGGATGGAAGTTTGGAGATGGATCT GCCCATGATGCAACTCAAAGAGTTGTTCAACGTAAATCACTTCATTGTGAGCCAAACTAA TCCTCACATCTCTCCACTCCTCCGACTGAAGGAGATTGTCACAACCTATGGAGGTCGCTT CGCTGGAAAGCTTGCTCGTCTGGCTGAAATGGAGGTTAAGTACAGATGTAACCAAATCCT AGAAATTGGCCTCCCACTGGGAGGACTAGCGAAATTGTTTGCTCAGGATTGGGAGGGTGA TGTCACCATGGTTATGCCGGCAACAGCAGCCCAGTACTTGAAGATTATACAAAACCCTAC ATATGCGGAGCTGCAAATGGCTGCCAACCAGGGGCGCAGGTGCACATGGGAGAAGATCTC TGCGATCAGAACAAACTGTGCTATTGAACTTGCGTTGGATGAGTCCATTGCCGTTCTAAA CCATAAAAGAAGACTAAAGAGAAGCATGGAAAGGGTAGCTTCTGCTTCCCAGGGATATAC ATGCAGTTCTGTAATCAGAACACCAAGGAGGGTACCATCGTGGAGCTGCATCAGTCGAGA GAATTCTACAGGATCTCTCTCAGAAGATTGTTTTGCAACCACTAGTTCATCTACTCACCA AGGAATTCAAGTTGTTGCCACACCGAACGTTATTCATAATGATGGAAGTGAGAGTGAATC AGAAACCATTGACTTAAATTCTTGGACCCGGAGTGGTGGACCTCTAATGAGGACTTCATC AGCTGACATGTTCATCAATTTCATTCAGAATCTTGAGATAGAGTCTGAGTTCAATACAGG TAATTCATCAGGATCTACCGTTTCTAAAGATTCATGCCCAAACAATAATTCTGGAGTTAC TGCACAAGGTACAGATAGAAGCACAGACACATCTGAAACTGGTTCATGCAATACTGGCAA CAATATAGCTAGTCAACCCTCTACCTCTACAAGCATTGCTGTTTCTGAAGGAGAACTGCT GCAACCAGAAAGGAGTACTAACGGAATTCTAATTAATGTTGTCAAAAGAAAGAGTGTGTT TGGTGAGCATGAAAGCGAAGCTGAAACCGAATCATATGTGGACACAACAAATTTGGACAC TTCTGACTGTCCTGGAGATAACAAAGATGCAGCTGACTCAAACGATCTTTCAGCTGCTCA TACTGATTCTGTGACTTCACAACATTCTTCAGCTGATGAATAGATGCTAGAGTTTGAAAG ATTACCGGTGATAGTTTATTACAGCAATGTTGTACGGGAAAGCCATAGTATCTCCGTTTA TAGAGAAACTGTAGCGCAGATGGTGATGACTGATGATATACGTCTTATGCTAATGATATG TTTATGTTTGGTGTATACATGTACTGTAAAATTATTGTTTGTTGCATCACACATGCATTA GTGAAATCAGTTGGCTGCCATTCTTTCGC